RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 NAV1Q8NEY1 1877 aa4.14□□□□□ -1.75
MCF2-202ENST00000370573 TCP10L2B9ZVM9 353 aa4.14□□□□□ -1.75
MCF2-202ENST00000370573 ORC4O43929 436 aa4.14□□□□□ -1.75
MCF2-202ENST00000370573 GRIN3BO60391 1043 aa4.14□□□□□ -1.75
MCF2-202ENST00000370573 PDGFRBP09619 1106 aa4.14□□□□□ -1.75
MCF2-202ENST00000370573 RAB6AP20340 208 aa4.14□□□□□ -1.75
MCF2-202ENST00000370573 MASP1P48740 699 aa4.14□□□□□ -1.75
MCF2-202ENST00000370573 CDK8P49336 464 aa4.14□□□□□ -1.75
MCF2-202ENST00000370573 MMP14P50281 582 aa4.14□□□□□ -1.75
MCF2-202ENST00000370573 GABPAQ06546 454 aa4.14□□□□□ -1.75
MCF2-202ENST00000370573 ST3GAL1Q11201 340 aa4.14□□□□□ -1.75
MCF2-202ENST00000370573 LRP8Q14114 963 aa4.14□□□□□ -1.75
MCF2-202ENST00000370573 BECN1Q14457 450 aa4.14□□□□□ -1.75
MCF2-202ENST00000370573 TBC1D10BQ4KMP7 808 aaPredicted RBP4.14□□□□□ -1.75
MCF2-202ENST00000370573 FAM47AQ5JRC9 791 aa4.14□□□□□ -1.75
MCF2-202ENST00000370573 RRP12Q5JTH9 1297 aaKnown RBP4.14□□□□□ -1.75
MCF2-202ENST00000370573 PCNX4Q63HM2 1172 aa4.14□□□□□ -1.75
MCF2-202ENST00000370573 NBPF11Q86T75 865 aa4.14□□□□□ -1.75
MCF2-202ENST00000370573 FMNL3Q8IVF7 1028 aa4.14□□□□□ -1.75
MCF2-202ENST00000370573 HSCBQ8IWL3 235 aa4.14□□□□□ -1.75
MCF2-202ENST00000370573 EXOC8Q8IYI6 725 aa4.14□□□□□ -1.75
MCF2-202ENST00000370573 C2CD4AQ8NCU7 369 aaPredicted RBP4.14□□□□□ -1.75
MCF2-202ENST00000370573 SHKBP1Q8TBC3 707 aa4.14□□□□□ -1.75
MCF2-202ENST00000370573 IGDCC4Q8TDY8 1250 aa4.14□□□□□ -1.75
MCF2-202ENST00000370573 NT5C1AQ9BXI3 368 aa4.14□□□□□ -1.75
MCF2-202ENST00000370573 AGXT2Q9BYV1 514 aa4.14□□□□□ -1.75
MCF2-202ENST00000370573 SUGCTQ9HAC7 445 aa4.14□□□□□ -1.75
MCF2-202ENST00000370573 PCMTD2Q9NV79 361 aa4.14□□□□□ -1.75
MCF2-202ENST00000370573 GPRC5DQ9NZD1 345 aa4.14□□□□□ -1.75
MCF2-202ENST00000370573 SCAF8Q9UPN6 1271 aaKnown RBP4.14□□□□□ -1.75
MCF2-202ENST00000370573 ROBO3Q96MS0 1386 aa4.14□□□□□ -1.75
MCF2-202ENST00000370573 FAM95CA0A1B0GW59 222 aa4.14□□□□□ -1.75
MCF2-202ENST00000370573 WDR64B1ANS9 1081 aa4.14□□□□□ -1.75
MCF2-202ENST00000370573 H7C1D1 291 aa4.14□□□□□ -1.75
MCF2-202ENST00000370573 DTNBO60941 627 aa4.14□□□□□ -1.75
MCF2-202ENST00000370573 ENTPD3O75355 529 aa4.14□□□□□ -1.75
MCF2-202ENST00000370573 ADH5P11766 374 aa4.14□□□□□ -1.75
MCF2-202ENST00000370573 LIG1P18858 919 aa4.14□□□□□ -1.75
MCF2-202ENST00000370573 MCM5P33992 734 aa4.14□□□□□ -1.75
MCF2-202ENST00000370573 APOBRQ0VD83 1088 aa4.14□□□□□ -1.75
MCF2-202ENST00000370573 TRDNQ13061 729 aa4.14□□□□□ -1.75
MCF2-202ENST00000370573 CUL4AQ13619 759 aa4.14□□□□□ -1.75
MCF2-202ENST00000370573 ME3Q16798 604 aa4.14□□□□□ -1.75
MCF2-202ENST00000370573 C16orf86Q6ZW13 317 aa4.14□□□□□ -1.75
MCF2-202ENST00000370573 RALYLQ86SE5 291 aaKnown RBP4.14□□□□□ -1.75
MCF2-202ENST00000370573 ZDHHC13Q8IUH4 622 aa4.14□□□□□ -1.75
MCF2-202ENST00000370573 RELL1Q8IUW5 271 aa4.14□□□□□ -1.75
MCF2-202ENST00000370573 FBXL16Q8N461 479 aa4.14□□□□□ -1.75
MCF2-202ENST00000370573 PHC3Q8NDX5 983 aa4.14□□□□□ -1.75
MCF2-202ENST00000370573 BRF1Q92994 677 aa4.14□□□□□ -1.75
MCF2-202ENST00000370573 KRT23Q9C075 422 aa4.14□□□□□ -1.75
MCF2-202ENST00000370573 RNF41Q9H4P4 317 aaPredicted RBP4.14□□□□□ -1.75
MCF2-202ENST00000370573 CNNM2Q9H8M5 875 aa4.14□□□□□ -1.75
MCF2-202ENST00000370573 TOMM22Q9NS69 142 aa4.14□□□□□ -1.75
MCF2-202ENST00000370573 LIMCH1Q9UPQ0 1083 aa4.14□□□□□ -1.75
MCF2-202ENST00000370573 PRKAB1Q9Y478 270 aa4.14□□□□□ -1.75
MCF2-202ENST00000370573 ACTL7BQ9Y614 415 aa4.14□□□□□ -1.75
MCF2-202ENST00000370573 LAMB1P07942 1786 aa4.14□□□□□ -1.75
MCF2-202ENST00000370573 WDR19Q8NEZ3 1342 aa4.14□□□□□ -1.75
MCF2-202ENST00000370573 SH2B2O14492 632 aaPredicted RBP4.13□□□□□ -1.75
MCF2-202ENST00000370573 RANBP6O60518 1105 aaKnown RBP4.13□□□□□ -1.75
MCF2-202ENST00000370573 NMT2O60551 498 aa4.13□□□□□ -1.75
MCF2-202ENST00000370573 PF4P02776 101 aa4.13□□□□□ -1.75
MCF2-202ENST00000370573 S100BP04271 92 aaPredicted RBP4.13□□□□□ -1.75
MCF2-202ENST00000370573 NFICP08651 508 aa4.13□□□□□ -1.75
MCF2-202ENST00000370573 GSTT1P30711 240 aa4.13□□□□□ -1.75
MCF2-202ENST00000370573 SHMT1P34896 483 aa4.13□□□□□ -1.75
MCF2-202ENST00000370573 MCM2P49736 904 aa4.13□□□□□ -1.75
MCF2-202ENST00000370573 EVCP57679 992 aa4.13□□□□□ -1.75
MCF2-202ENST00000370573 SEPT6Q14141 434 aa4.13□□□□□ -1.75
MCF2-202ENST00000370573 RRP1BQ14684 758 aaKnown RBP4.13□□□□□ -1.75
MCF2-202ENST00000370573 SEC23AQ15436 765 aa4.13□□□□□ -1.75
MCF2-202ENST00000370573 KIF4BQ2VIQ3 1234 aa4.13□□□□□ -1.75
MCF2-202ENST00000370573 FKBP1CQ5VVH2 108 aa4.13□□□□□ -1.75
MCF2-202ENST00000370573 TTC6Q86TZ1 520 aa4.13□□□□□ -1.75
MCF2-202ENST00000370573 NECAB1Q8N987 351 aa4.13□□□□□ -1.75
MCF2-202ENST00000370573 FAM151AQ8WW52 585 aa4.13□□□□□ -1.75
MCF2-202ENST00000370573 TMEM39BQ9GZU3 492 aa4.13□□□□□ -1.75
MCF2-202ENST00000370573 DNAJC18Q9H819 358 aa4.13□□□□□ -1.75
MCF2-202ENST00000370573 LY9Q9HBG7 655 aa4.13□□□□□ -1.75
MCF2-202ENST00000370573 VEZTQ9HBM0 779 aa4.13□□□□□ -1.75
MCF2-202ENST00000370573 IL17RBQ9NRM6 502 aa4.13□□□□□ -1.75
MCF2-202ENST00000370573 FAM105AQ9NUU6 356 aa4.13□□□□□ -1.75
MCF2-202ENST00000370573 TMEM260Q9NX78 707 aa4.13□□□□□ -1.75
MCF2-202ENST00000370573 SIPA1L1O43166 1804 aa4.13□□□□□ -1.75
MCF2-202ENST00000370573 IFIT3O14879 490 aaKnown RBP4.13□□□□□ -1.75
MCF2-202ENST00000370573 SLC3A2P08195 630 aaKnown RBP4.13□□□□□ -1.75
MCF2-202ENST00000370573 PCP11498 1178 aaKnown RBP4.13□□□□□ -1.75
MCF2-202ENST00000370573 PDIA3P30101 505 aaKnown RBP4.13□□□□□ -1.75
MCF2-202ENST00000370573 JAG1P78504 1218 aa4.13□□□□□ -1.75
MCF2-202ENST00000370573 TFAP4Q01664 338 aa4.13□□□□□ -1.75
MCF2-202ENST00000370573 PDE4BQ07343 736 aa4.13□□□□□ -1.75
MCF2-202ENST00000370573 SHROOM1Q2M3G4 852 aaPredicted RBP4.13□□□□□ -1.75
MCF2-202ENST00000370573 TMEM67Q5HYA8 995 aa4.13□□□□□ -1.75
MCF2-202ENST00000370573 RCSD1Q6JBY9 416 aa4.13□□□□□ -1.75
MCF2-202ENST00000370573 FAM83AQ86UY5 434 aa4.13□□□□□ -1.75
MCF2-202ENST00000370573 JAMLQ86YT9 394 aa4.13□□□□□ -1.75
MCF2-202ENST00000370573 AMOTL1Q8IY63 956 aa4.13□□□□□ -1.75
MCF2-202ENST00000370573 GOLM1Q8NBJ4 401 aa4.13□□□□□ -1.75
MCF2-202ENST00000370573 STK35Q8TDR2 534 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms