RNA–Protein interactions for RNA: ENST00000368213.9

PTPRK-205, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-205ENST00000368213 SPDYE2BA6NHP3 402 aa11.63□□□□□ -0.55
PTPRK-205ENST00000368213 NEMP1O14524 444 aa11.63□□□□□ -0.55
PTPRK-205ENST00000368213 PRPSAP2O60256 369 aa11.63□□□□□ -0.55
PTPRK-205ENST00000368213 SPDYE6P0CI01 402 aa11.63□□□□□ -0.55
PTPRK-205ENST00000368213 COPB1P53618 953 aaKnown RBP11.63□□□□□ -0.55
PTPRK-205ENST00000368213 KRT33BQ14525 404 aa11.63□□□□□ -0.55
PTPRK-205ENST00000368213 NBPF9Q3BBW0 867 aa11.63□□□□□ -0.55
PTPRK-205ENST00000368213 XPO4Q9C0E2 1151 aaKnown RBP11.63□□□□□ -0.55
PTPRK-205ENST00000368213 POLRMTO00411 1230 aaKnown RBP11.63□□□□□ -0.55
PTPRK-205ENST00000368213 BUB1O43683 1085 aa11.63□□□□□ -0.55
PTPRK-205ENST00000368213 MESDQ14696 234 aa11.63□□□□□ -0.55
PTPRK-205ENST00000368213 C16orf86Q6ZW13 317 aa11.63□□□□□ -0.55
PTPRK-205ENST00000368213 GRAMD1CQ8IYS0 662 aa11.63□□□□□ -0.55
PTPRK-205ENST00000368213 KIF12Q96FN5 646 aa11.63□□□□□ -0.55
PTPRK-205ENST00000368213 PCDHA5Q9Y5H7 936 aa11.63□□□□□ -0.55
PTPRK-205ENST00000368213 A0A087WWV3 80 aa11.62□□□□□ -0.55
PTPRK-205ENST00000368213 ADCY8P40145 1251 aa11.62□□□□□ -0.55
PTPRK-205ENST00000368213 RCAN1P53805 252 aa11.62□□□□□ -0.55
PTPRK-205ENST00000368213 MAN2A1Q16706 1144 aa11.62□□□□□ -0.55
PTPRK-205ENST00000368213 KYAT1Q16773 422 aa11.62□□□□□ -0.55
PTPRK-205ENST00000368213 USP50Q70EL3 339 aaPredicted RBP11.62□□□□□ -0.55
PTPRK-205ENST00000368213 POTEDQ86YR6 584 aa11.62□□□□□ -0.55
PTPRK-205ENST00000368213 STAG2Q8N3U4 1231 aa11.62□□□□□ -0.55
PTPRK-205ENST00000368213 ZNF148Q9UQR1 794 aa11.62□□□□□ -0.55
PTPRK-205ENST00000368213 KCNK3O14649 394 aa11.62□□□□□ -0.55
PTPRK-205ENST00000368213 TRPA1O75762 1119 aa11.62□□□□□ -0.55
PTPRK-205ENST00000368213 USP11P51784 963 aa11.62□□□□□ -0.55
PTPRK-205ENST00000368213 CYP27A1Q02318 531 aa11.62□□□□□ -0.55
PTPRK-205ENST00000368213 CCDC6Q16204 474 aa11.62□□□□□ -0.55
PTPRK-205ENST00000368213 SBK1Q52WX2 424 aa11.62□□□□□ -0.55
PTPRK-205ENST00000368213 IFT20Q8IY31 132 aa11.62□□□□□ -0.55
PTPRK-205ENST00000368213 FANCLQ9NW38 375 aa11.62□□□□□ -0.55
PTPRK-205ENST00000368213 PCDHB7Q9Y5E2 793 aa11.62□□□□□ -0.55
PTPRK-205ENST00000368213 VPS41P49754 854 aa11.62□□□□□ -0.55
PTPRK-205ENST00000368213 TMEM62Q0P6H9 643 aa11.62□□□□□ -0.55
PTPRK-205ENST00000368213 SFR1Q86XK3 245 aa11.62□□□□□ -0.55
PTPRK-205ENST00000368213 SPATA31D1Q6ZQQ2 1576 aa11.62□□□□□ -0.55
PTPRK-205ENST00000368213 RFX7Q2KHR2 1363 aa11.62□□□□□ -0.55
PTPRK-205ENST00000368213 TNS2Q63HR2 1409 aa11.62□□□□□ -0.55
PTPRK-205ENST00000368213 POTECB2RU33 542 aa11.62□□□□□ -0.55
PTPRK-205ENST00000368213 E9PMD0 336 aa11.62□□□□□ -0.55
PTPRK-205ENST00000368213 S100BP04271 92 aaPredicted RBP11.62□□□□□ -0.55
PTPRK-205ENST00000368213 PAK2Q13177 524 aa11.62□□□□□ -0.55
PTPRK-205ENST00000368213 ZNF394Q53GI3 561 aa11.62□□□□□ -0.55
PTPRK-205ENST00000368213 INTS8Q75QN2 995 aaKnown RBP11.62□□□□□ -0.55
PTPRK-205ENST00000368213 ZNF560Q96MR9 790 aa11.62□□□□□ -0.55
PTPRK-205ENST00000368213 MRPL47Q9HD33 250 aaKnown RBP11.62□□□□□ -0.55
PTPRK-205ENST00000368213 AAASQ9NRG9 546 aa11.62□□□□□ -0.55
PTPRK-205ENST00000368213 STRIP2Q9ULQ0 834 aa11.62□□□□□ -0.55
PTPRK-205ENST00000368213 GPR75-ASB3A0A0A6YYF3 556 aa11.62□□□□□ -0.55
PTPRK-205ENST00000368213 CYP2C9P11712 490 aa11.62□□□□□ -0.55
PTPRK-205ENST00000368213 SAT1P21673 171 aa11.62□□□□□ -0.55
PTPRK-205ENST00000368213 NBPF12Q5TAG4 269 aaPredicted RBP11.62□□□□□ -0.55
PTPRK-205ENST00000368213 PPP4R3CPQ6ZMV5 832 aa11.62□□□□□ -0.55
PTPRK-205ENST00000368213 EPSTI1Q96J88 318 aa11.62□□□□□ -0.55
PTPRK-205ENST00000368213 FARP1Q9Y4F1 1045 aaPredicted RBP11.62□□□□□ -0.55
PTPRK-205ENST00000368213 HOXA7P31268 230 aaPredicted RBP11.61□□□□□ -0.55
PTPRK-205ENST00000368213 CAP2P40123 477 aa11.61□□□□□ -0.55
PTPRK-205ENST00000368213 EFNA5P52803 228 aa11.61□□□□□ -0.55
PTPRK-205ENST00000368213 ACAP3Q96P50 834 aa11.61□□□□□ -0.55
PTPRK-205ENST00000368213 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.61□□□□□ -0.551e-8■■■□□ 16
PTPRK-205ENST00000368213 V9GYY5 206 aaPredicted RBP11.61□□□□□ -0.55
PTPRK-205ENST00000368213 MAGEB2O15479 319 aa11.61□□□□□ -0.55
PTPRK-205ENST00000368213 KRT15P19012 456 aa11.61□□□□□ -0.55
PTPRK-205ENST00000368213 KRT17Q04695 432 aa11.61□□□□□ -0.55
PTPRK-205ENST00000368213 GLB1LQ6UWU2 654 aa11.61□□□□□ -0.55
PTPRK-205ENST00000368213 MB21D2Q8IYB1 491 aaPredicted RBP11.61□□□□□ -0.55
PTPRK-205ENST00000368213 PRIMPOLQ96LW4 560 aa11.61□□□□□ -0.55
PTPRK-205ENST00000368213 DONSONQ9NYP3 566 aa11.61□□□□□ -0.55
PTPRK-205ENST00000368213 MAD1L1Q9Y6D9 718 aa11.61□□□□□ -0.55
PTPRK-205ENST00000368213 WDR19Q8NEZ3 1342 aa11.61□□□□□ -0.55
PTPRK-205ENST00000368213 KLRK1P26718 216 aa11.61□□□□□ -0.55
PTPRK-205ENST00000368213 LAMC2Q13753 1193 aa11.61□□□□□ -0.55
PTPRK-205ENST00000368213 EPHA7Q15375 998 aa11.61□□□□□ -0.55
PTPRK-205ENST00000368213 SLC10A5Q5PT55 438 aa11.61□□□□□ -0.55
PTPRK-205ENST00000368213 ANKS4BQ8N8V4 417 aa11.61□□□□□ -0.55
PTPRK-205ENST00000368213 XXYLT1Q8NBI6 393 aa11.61□□□□□ -0.55
PTPRK-205ENST00000368213 EIF2AK1Q9BQI3 630 aaKnown RBP11.61□□□□□ -0.55
PTPRK-205ENST00000368213 STK36Q9NRP7 1315 aa11.61□□□□□ -0.55
PTPRK-205ENST00000368213 ADM5C9JUS6 153 aa11.61□□□□□ -0.55
PTPRK-205ENST00000368213 GFPT2O94808 682 aa11.61□□□□□ -0.55
PTPRK-205ENST00000368213 PRKCBP05771 671 aa11.61□□□□□ -0.55
PTPRK-205ENST00000368213 EEF1GP26641 437 aaKnown RBP11.61□□□□□ -0.55
PTPRK-205ENST00000368213 TUBB2AQ13885 445 aa11.61□□□□□ -0.55
PTPRK-205ENST00000368213 LRRC31Q6UY01 552 aa11.61□□□□□ -0.55
PTPRK-205ENST00000368213 PHLDB2Q86SQ0 1253 aa11.61□□□□□ -0.55
PTPRK-205ENST00000368213 ERICH1Q86X53 443 aa11.61□□□□□ -0.55
PTPRK-205ENST00000368213 KCTD6Q8NC69 237 aa11.61□□□□□ -0.55
PTPRK-205ENST00000368213 TUBB2BQ9BVA1 445 aa11.61□□□□□ -0.55
PTPRK-205ENST00000368213 RBSNQ9H1K0 784 aa11.61□□□□□ -0.55
PTPRK-205ENST00000368213 HPCAL4Q9UM19 191 aa11.61□□□□□ -0.55
PTPRK-205ENST00000368213 MEGF6O75095 1541 aa11.61□□□□□ -0.55
PTPRK-205ENST00000368213 POTEFA5A3E0 1075 aa11.61□□□□□ -0.55
PTPRK-205ENST00000368213 TUBBP07437 444 aa11.61□□□□□ -0.55
PTPRK-205ENST00000368213 POTEIP0CG38 1075 aa11.61□□□□□ -0.55
PTPRK-205ENST00000368213 YWHABP31946 246 aaKnown RBP11.61□□□□□ -0.55
PTPRK-205ENST00000368213 CDO1Q16878 200 aa11.61□□□□□ -0.55
PTPRK-205ENST00000368213 ERCC6LQ2NKX8 1250 aa11.61□□□□□ -0.55
PTPRK-205ENST00000368213 XKR3Q5GH77 459 aa11.61□□□□□ -0.55
PTPRK-205ENST00000368213 POTEGQ6S5H5 508 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms