RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 ABI2Q9NYB9 513 aaPredicted RBP9.28□□□□□ -0.92
SYNE1-206ENST00000367253 ANKFY1Q9P2R3 1169 aa9.28□□□□□ -0.92
SYNE1-206ENST00000367253 N4BP1O75113 896 aaKnown RBP9.27□□□□□ -0.92
SYNE1-206ENST00000367253 XYLBO75191 536 aa9.27□□□□□ -0.92
SYNE1-206ENST00000367253 RALAP11233 206 aa9.27□□□□□ -0.92
SYNE1-206ENST00000367253 IL13P35225 146 aa9.27□□□□□ -0.92
SYNE1-206ENST00000367253 ALDH1A3P47895 512 aa9.27□□□□□ -0.92
SYNE1-206ENST00000367253 HDLBPQ00341 1268 aaKnown RBP9.27□□□□□ -0.92
SYNE1-206ENST00000367253 ANGPT1Q15389 498 aa9.27□□□□□ -0.92
SYNE1-206ENST00000367253 COLEC12Q5KU26 742 aa9.27□□□□□ -0.92
SYNE1-206ENST00000367253 ZBTB38Q8NAP3 1195 aaPredicted RBP9.27□□□□□ -0.92
SYNE1-206ENST00000367253 SNX21Q969T3 373 aa9.27□□□□□ -0.92
SYNE1-206ENST00000367253 TSPAN18Q96SJ8 248 aa9.27□□□□□ -0.92
SYNE1-206ENST00000367253 COLEC11Q9BWP8 271 aa9.27□□□□□ -0.92
SYNE1-206ENST00000367253 TRIM45Q9H8W5 580 aaPredicted RBP9.27□□□□□ -0.92
SYNE1-206ENST00000367253 ATP6V0A4Q9HBG4 840 aa9.27□□□□□ -0.92
SYNE1-206ENST00000367253 ZNF212Q9UDV6 495 aa9.27□□□□□ -0.92
SYNE1-206ENST00000367253 BZW2Q9Y6E2 419 aaKnown RBP9.27□□□□□ -0.92
SYNE1-206ENST00000367253 EXOC3O60645 756 aa9.27□□□□□ -0.93
SYNE1-206ENST00000367253 OLR1P78380 273 aa9.27□□□□□ -0.93
SYNE1-206ENST00000367253 TRIM14Q14142 442 aa9.27□□□□□ -0.93
SYNE1-206ENST00000367253 KAZNQ674X7 775 aa9.27□□□□□ -0.93
SYNE1-206ENST00000367253 PPP1R2P3Q6NXS1 205 aa9.27□□□□□ -0.93
SYNE1-206ENST00000367253 TNIP2Q8NFZ5 429 aa9.27□□□□□ -0.93
SYNE1-206ENST00000367253 ST7Q9NRC1 585 aa9.27□□□□□ -0.93
SYNE1-206ENST00000367253 HOMER3Q9NSC5 361 aa9.27□□□□□ -0.93
SYNE1-206ENST00000367253 GGA3Q9NZ52 723 aa9.27□□□□□ -0.93
SYNE1-206ENST00000367253 TSKSQ9UJT2 592 aa9.27□□□□□ -0.93
SYNE1-206ENST00000367253 AP3B1O00203 1094 aa9.27□□□□□ -0.93
SYNE1-206ENST00000367253 ATP8B1O43520 1251 aa9.27□□□□□ -0.93
SYNE1-206ENST00000367253 SUPT3HO75486 399 aa9.27□□□□□ -0.93
SYNE1-206ENST00000367253 STX2P32856 288 aa9.27□□□□□ -0.93
SYNE1-206ENST00000367253 GPSM2P81274 684 aa9.27□□□□□ -0.93
SYNE1-206ENST00000367253 TFAP4Q01664 338 aa9.27□□□□□ -0.93
SYNE1-206ENST00000367253 GTF2H3Q13889 308 aa9.27□□□□□ -0.93
SYNE1-206ENST00000367253 SLC9A5Q14940 896 aa9.27□□□□□ -0.93
SYNE1-206ENST00000367253 GNASQ5JWF2 1037 aa9.27□□□□□ -0.93
SYNE1-206ENST00000367253 LRRC31Q6UY01 552 aa9.27□□□□□ -0.93
SYNE1-206ENST00000367253 TMEM179Q6ZVK1 233 aa9.27□□□□□ -0.93
SYNE1-206ENST00000367253 SP8Q8IXZ3 490 aa9.27□□□□□ -0.93
SYNE1-206ENST00000367253 MYCT1Q8N699 235 aa9.27□□□□□ -0.93
SYNE1-206ENST00000367253 STKLD1Q8NE28 680 aa9.27□□□□□ -0.93
SYNE1-206ENST00000367253 ZNF653Q96CK0 615 aa9.27□□□□□ -0.93
SYNE1-206ENST00000367253 RILPQ96NA2 401 aa9.27□□□□□ -0.93
SYNE1-206ENST00000367253 TRPV6Q9H1D0 765 aa9.27□□□□□ -0.93
SYNE1-206ENST00000367253 SLC38A10Q9HBR0 1119 aa9.27□□□□□ -0.93
SYNE1-206ENST00000367253 MAN1C1Q9NR34 630 aa9.27□□□□□ -0.93
SYNE1-206ENST00000367253 MROH7Q68CQ1 1323 aa9.27□□□□□ -0.93
SYNE1-206ENST00000367253 PTPRMP28827 1452 aa9.27□□□□□ -0.93
SYNE1-206ENST00000367253 ARHGEF9O43307 516 aa9.27□□□□□ -0.93
SYNE1-206ENST00000367253 PSMA4P25789 261 aaKnown RBP9.27□□□□□ -0.93
SYNE1-206ENST00000367253 KPNA1P52294 538 aaPredicted RBP9.27□□□□□ -0.93
SYNE1-206ENST00000367253 TUBA1BP68363 451 aa9.27□□□□□ -0.93
SYNE1-206ENST00000367253 MYL5Q02045 173 aa9.27□□□□□ -0.93
SYNE1-206ENST00000367253 MYBPC2Q14324 1141 aa9.27□□□□□ -0.93
SYNE1-206ENST00000367253 TUBA1AQ71U36 451 aa9.27□□□□□ -0.93
SYNE1-206ENST00000367253 MYOCDQ8IZQ8 938 aa9.27□□□□□ -0.93
SYNE1-206ENST00000367253 REXO1Q8N1G1 1221 aaKnown RBP9.27□□□□□ -0.93
SYNE1-206ENST00000367253 SIX6OS1Q8N1H7 587 aa9.27□□□□□ -0.93
SYNE1-206ENST00000367253 RUBCNLQ9H714 662 aa9.27□□□□□ -0.93
SYNE1-206ENST00000367253 ADGRL3Q9HAR2 1447 aa9.27□□□□□ -0.93
SYNE1-206ENST00000367253 OPLAHO14841 1288 aa9.26□□□□□ -0.93
SYNE1-206ENST00000367253 TADA2AO75478 443 aa9.26□□□□□ -0.93
SYNE1-206ENST00000367253 B3GALNT1O75752 331 aa9.26□□□□□ -0.93
SYNE1-206ENST00000367253 LMNB2Q03252 620 aa9.26□□□□□ -0.93
SYNE1-206ENST00000367253 BYSLQ13895 437 aaKnown RBP9.26□□□□□ -0.93
SYNE1-206ENST00000367253 TTBK2Q6IQ55 1244 aa9.26□□□□□ -0.93
SYNE1-206ENST00000367253 LLGL2Q6P1M3 1020 aa9.26□□□□□ -0.93
SYNE1-206ENST00000367253 DDX53Q86TM3 631 aaKnown RBP9.26□□□□□ -0.93
SYNE1-206ENST00000367253 RHPN1Q8TCX5 695 aa9.26□□□□□ -0.93
SYNE1-206ENST00000367253 ARL8AQ96BM9 186 aa9.26□□□□□ -0.93
SYNE1-206ENST00000367253 CAPS2Q9BXY5 557 aa9.26□□□□□ -0.93
SYNE1-206ENST00000367253 ACAD9Q9H845 621 aa9.26□□□□□ -0.93
SYNE1-206ENST00000367253 PSTPIP2Q9H939 334 aa9.26□□□□□ -0.93
SYNE1-206ENST00000367253 KRT82Q9NSB4 513 aa9.26□□□□□ -0.93
SYNE1-206ENST00000367253 SEPT9Q9UHD8 586 aaPredicted RBP9.26□□□□□ -0.93
SYNE1-206ENST00000367253 ITGB1BP2Q9UKP3 347 aa9.26□□□□□ -0.93
SYNE1-206ENST00000367253 GOLGA8IPA6NC78 632 aa9.26□□□□□ -0.93
SYNE1-206ENST00000367253 GOLGA8KD6RF30 607 aa9.26□□□□□ -0.93
SYNE1-206ENST00000367253 BNIP3LO60238 219 aa9.26□□□□□ -0.93
SYNE1-206ENST00000367253 ALDH1A2O94788 518 aa9.26□□□□□ -0.93
SYNE1-206ENST00000367253 SEMA3DO95025 777 aa9.26□□□□□ -0.93
SYNE1-206ENST00000367253 URODP06132 367 aa9.26□□□□□ -0.93
SYNE1-206ENST00000367253 ATN1P54259 1190 aaPredicted RBP9.26□□□□□ -0.93
SYNE1-206ENST00000367253 ITIH3Q06033 890 aa9.26□□□□□ -0.93
SYNE1-206ENST00000367253 PDXDC2PQ6P474 469 aa9.26□□□□□ -0.93
SYNE1-206ENST00000367253 ENAHQ8N8S7 591 aaPredicted RBP9.26□□□□□ -0.93
SYNE1-206ENST00000367253 NSUN6Q8TEA1 469 aaKnown RBP9.26□□□□□ -0.93
SYNE1-206ENST00000367253 SLF1Q9BQI6 1058 aa9.26□□□□□ -0.93
SYNE1-206ENST00000367253 DIABLOQ9NR28 239 aa9.26□□□□□ -0.93
SYNE1-206ENST00000367253 AASDHPPTQ9NRN7 309 aa9.26□□□□□ -0.93
SYNE1-206ENST00000367253 PRAMEF22A3QJZ6 481 aa9.26□□□□□ -0.93
SYNE1-206ENST00000367253 NPM3O75607 178 aaKnown RBP9.26□□□□□ -0.93
SYNE1-206ENST00000367253 CABYRO75952 493 aa9.26□□□□□ -0.93
SYNE1-206ENST00000367253 KRT15P19012 456 aa9.26□□□□□ -0.93
SYNE1-206ENST00000367253 KRT9P35527 623 aa9.26□□□□□ -0.93
SYNE1-206ENST00000367253 FKBP1BP68106 108 aa9.26□□□□□ -0.93
SYNE1-206ENST00000367253 DNM1Q05193 864 aaKnown RBP9.26□□□□□ -0.93
SYNE1-206ENST00000367253 MAP2K5Q13163 448 aa9.26□□□□□ -0.93
SYNE1-206ENST00000367253 ARL13BQ3SXY8 428 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms