RNA–Protein interactions for RNA: ENST00000366872.9

CAPN8-201, Transcript of calpain 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN8, Length 2,427 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8-201ENST00000366872 SPIRE1Q08AE8 756 aa13.94□□□□□ -0.18
CAPN8-201ENST00000366872 GIT2Q14161 759 aa13.94□□□□□ -0.18
CAPN8-201ENST00000366872 FAM129AQ9BZQ8 928 aa13.94□□□□□ -0.18
CAPN8-201ENST00000366872 CARD9Q9H257 536 aa13.94□□□□□ -0.18
CAPN8-201ENST00000366872 FRMPD2Q68DX3 1309 aaPredicted RBP13.93□□□□□ -0.18
CAPN8-201ENST00000366872 TMCO5BA8MYB1 307 aa13.93□□□□□ -0.18
CAPN8-201ENST00000366872 KRIT1O00522 736 aa13.93□□□□□ -0.18
CAPN8-201ENST00000366872 EIF3DO15371 548 aaKnown RBP eCLIP13.93□□□□□ -0.18
CAPN8-201ENST00000366872 TMEM253P0C7T8 217 aa13.93□□□□□ -0.18
CAPN8-201ENST00000366872 LMNB1P20700 586 aa13.93□□□□□ -0.18
CAPN8-201ENST00000366872 MNAT1P51948 309 aa13.93□□□□□ -0.18
CAPN8-201ENST00000366872 PTENP60484 403 aa13.93□□□□□ -0.18
CAPN8-201ENST00000366872 TRADDQ15628 312 aa13.93□□□□□ -0.18
CAPN8-201ENST00000366872 CCDC13Q8IYE1 715 aa13.93□□□□□ -0.18
CAPN8-201ENST00000366872 RBM46Q8TBY0 533 aaKnown RBP13.93□□□□□ -0.18
CAPN8-201ENST00000366872 TATDN2Q93075 761 aa13.93□□□□□ -0.18
CAPN8-201ENST00000366872 SYT11Q9BT88 431 aa13.93□□□□□ -0.18
CAPN8-201ENST00000366872 OLFML3Q9NRN5 406 aa13.93□□□□□ -0.18
CAPN8-201ENST00000366872 UTP11Q9Y3A2 253 aaKnown RBP13.93□□□□□ -0.18
CAPN8-201ENST00000366872 SIPA1L1O43166 1804 aa13.93□□□□□ -0.18
CAPN8-201ENST00000366872 F8VZ95 297 aa13.93□□□□□ -0.18
CAPN8-201ENST00000366872 MARCH6O60337 910 aa13.93□□□□□ -0.18
CAPN8-201ENST00000366872 HSPA6P17066 643 aa13.93□□□□□ -0.18
CAPN8-201ENST00000366872 GAP43P17677 238 aa13.93□□□□□ -0.18
CAPN8-201ENST00000366872 SLC9A1P19634 815 aa13.93□□□□□ -0.18
CAPN8-201ENST00000366872 PPATQ06203 517 aa13.93□□□□□ -0.18
CAPN8-201ENST00000366872 IFFO1Q0D2I5 559 aa13.93□□□□□ -0.18
CAPN8-201ENST00000366872 CCDC121Q6ZUS5 278 aa13.93□□□□□ -0.18
CAPN8-201ENST00000366872 HOOK3Q86VS8 718 aa13.93□□□□□ -0.18
CAPN8-201ENST00000366872 NELFCDQ8IXH7 590 aa13.93□□□□□ -0.18
CAPN8-201ENST00000366872 OLIG1Q8TAK6 271 aa13.93□□□□□ -0.18
CAPN8-201ENST00000366872 VTI1AQ96AJ9 217 aa13.93□□□□□ -0.18
CAPN8-201ENST00000366872 BORCS6Q96GS4 357 aa13.93□□□□□ -0.18
CAPN8-201ENST00000366872 FAM20AQ96MK3 541 aa13.93□□□□□ -0.18
CAPN8-201ENST00000366872 TMEM109Q9BVC6 243 aa13.93□□□□□ -0.18
CAPN8-201ENST00000366872 KDM4CQ9H3R0 1056 aa13.93□□□□□ -0.18
CAPN8-201ENST00000366872 DDX20Q9UHI6 824 aaKnown RBP13.93□□□□□ -0.18
CAPN8-201ENST00000366872 POTEB3A0JP26 581 aa13.92□□□□□ -0.18
CAPN8-201ENST00000366872 POTECB2RU33 542 aa13.92□□□□□ -0.18
CAPN8-201ENST00000366872 KCNQ2O43526 872 aa13.92□□□□□ -0.18
CAPN8-201ENST00000366872 CCDC172P0C7W6 258 aa13.92□□□□□ -0.18
CAPN8-201ENST00000366872 RFX1P22670 979 aa13.92□□□□□ -0.18
CAPN8-201ENST00000366872 HOXD13P35453 343 aa13.92□□□□□ -0.18
CAPN8-201ENST00000366872 SEC24CP53992 1094 aa13.92□□□□□ -0.18
CAPN8-201ENST00000366872 DHX34Q14147 1143 aaKnown RBP13.92□□□□□ -0.18
CAPN8-201ENST00000366872 SKIDA1Q1XH10 827 aa13.92□□□□□ -0.18
CAPN8-201ENST00000366872 CRY2Q49AN0 593 aa13.92□□□□□ -0.18
CAPN8-201ENST00000366872 POTEBQ6S5H4 581 aa13.92□□□□□ -0.18
CAPN8-201ENST00000366872 ETNPPLQ8TBG4 499 aa13.92□□□□□ -0.18
CAPN8-201ENST00000366872 RFFLQ8WZ73 363 aa13.92□□□□□ -0.18
CAPN8-201ENST00000366872 SLC35C1Q96A29 364 aa13.92□□□□□ -0.18
CAPN8-201ENST00000366872 PGM2Q96G03 612 aa13.92□□□□□ -0.18
CAPN8-201ENST00000366872 NEUROG2Q9H2A3 272 aa13.92□□□□□ -0.18
CAPN8-201ENST00000366872 AMFRQ9UKV5 643 aa13.92□□□□□ -0.18
CAPN8-201ENST00000366872 DDX3XO00571 662 aaKnown RBP eCLIP13.92□□□□□ -0.18
CAPN8-201ENST00000366872 MED24O75448 989 aa13.92□□□□□ -0.18
CAPN8-201ENST00000366872 STAT1P42224 750 aa13.92□□□□□ -0.18
CAPN8-201ENST00000366872 MMP14P50281 582 aa13.92□□□□□ -0.18
CAPN8-201ENST00000366872 BYSLQ13895 437 aaKnown RBP13.92□□□□□ -0.18
CAPN8-201ENST00000366872 UBE2SQ16763 222 aa13.92□□□□□ -0.18
CAPN8-201ENST00000366872 POLR3CQ9BUI4 534 aaPredicted RBP13.92□□□□□ -0.18
CAPN8-201ENST00000366872 CCDC134Q9H6E4 229 aa13.92□□□□□ -0.18
CAPN8-201ENST00000366872 KLC4Q9NSK0 619 aa13.92□□□□□ -0.18
CAPN8-201ENST00000366872 SRP68Q9UHB9 627 aaKnown RBP13.92□□□□□ -0.18
CAPN8-201ENST00000366872 FRMPD4Q14CM0 1322 aa13.91□□□□□ -0.18
CAPN8-201ENST00000366872 MYH11P35749 1972 aa13.91□□□□□ -0.18
CAPN8-201ENST00000366872 C21orf2O43822 256 aa13.91□□□□□ -0.18
CAPN8-201ENST00000366872 DNAJC8O75937 253 aaPredicted RBP13.91□□□□□ -0.18
CAPN8-201ENST00000366872 AKR1B1P15121 316 aa13.91□□□□□ -0.18
CAPN8-201ENST00000366872 CIITAP33076 1130 aa13.91□□□□□ -0.18
CAPN8-201ENST00000366872 XRCC4Q13426 336 aa13.91□□□□□ -0.18
CAPN8-201ENST00000366872 WLSQ5T9L3 541 aa13.91□□□□□ -0.18
CAPN8-201ENST00000366872 CACNA2D3Q8IZS8 1091 aa13.91□□□□□ -0.18
CAPN8-201ENST00000366872 DCAF4Q8WV16 495 aa13.91□□□□□ -0.18
CAPN8-201ENST00000366872 MKL1Q969V6 931 aa13.91□□□□□ -0.18
CAPN8-201ENST00000366872 CCDC17Q96LX7 622 aa13.91□□□□□ -0.18
CAPN8-201ENST00000366872 PSMD1Q99460 953 aa13.91□□□□□ -0.18
CAPN8-201ENST00000366872 STK33Q9BYT3 514 aa13.91□□□□□ -0.18
CAPN8-201ENST00000366872 ANO3Q9BYT9 981 aa13.91□□□□□ -0.18
CAPN8-201ENST00000366872 CNOT7Q9UIV1 285 aaKnown RBP13.91□□□□□ -0.18
CAPN8-201ENST00000366872 DNM3Q9UQ16 869 aa13.91□□□□□ -0.18
CAPN8-201ENST00000366872 RTCBQ9Y3I0 505 aaKnown RBP13.91□□□□□ -0.18
CAPN8-201ENST00000366872 ASTN1O14525 1302 aa13.91□□□□□ -0.18
CAPN8-201ENST00000366872 FOSP01100 380 aaPredicted RBP13.91□□□□□ -0.18
CAPN8-201ENST00000366872 NR3C1P04150 777 aa13.91□□□□□ -0.18
CAPN8-201ENST00000366872 GSTA1P08263 222 aa13.91□□□□□ -0.18
CAPN8-201ENST00000366872 MUTP22033 750 aa13.91□□□□□ -0.18
CAPN8-201ENST00000366872 ARID5AQ03989 594 aa13.91□□□□□ -0.18
CAPN8-201ENST00000366872 IFT88Q13099 833 aa13.91□□□□□ -0.18
CAPN8-201ENST00000366872 NFIXQ14938 502 aa13.91□□□□□ -0.18
CAPN8-201ENST00000366872 ANKRD20A8PQ5CZ79 823 aa13.91□□□□□ -0.18
CAPN8-201ENST00000366872 ERMARDQ5T6L9 678 aa13.91□□□□□ -0.18
CAPN8-201ENST00000366872 DUPD1Q68J44 220 aa13.91□□□□□ -0.18
CAPN8-201ENST00000366872 SEC16BQ96JE7 1060 aa13.91□□□□□ -0.18
CAPN8-201ENST00000366872 DDX47Q9H0S4 455 aaKnown RBP13.91□□□□□ -0.18
CAPN8-201ENST00000366872 RABEP2Q9H5N1 569 aa13.91□□□□□ -0.18
CAPN8-201ENST00000366872 DDX3YO15523 660 aaKnown RBP13.9□□□□□ -0.18
CAPN8-201ENST00000366872 SSBP05455 408 aaKnown RBP eCLIP13.9□□□□□ -0.18
CAPN8-201ENST00000366872 KRT18P05783 430 aaKnown RBP13.9□□□□□ -0.18
CAPN8-201ENST00000366872 ACTN1P12814 892 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms