RNA–Protein interactions for RNA: ENST00000366767.7

CDC42BPA-204, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 9,320 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-204ENST00000366767 ZNF543Q08ER8 600 aa5.8□□□□□ -1.48
CDC42BPA-204ENST00000366767 TCP10Q12799 353 aa5.8□□□□□ -1.48
CDC42BPA-204ENST00000366767 TNFAIP1Q13829 316 aa5.8□□□□□ -1.48
CDC42BPA-204ENST00000366767 SLMAPQ14BN4 828 aa5.8□□□□□ -1.48
CDC42BPA-204ENST00000366767 PDCD2Q16342 344 aaPredicted RBP5.8□□□□□ -1.48
CDC42BPA-204ENST00000366767 GNPTABQ3T906 1256 aa5.8□□□□□ -1.48
CDC42BPA-204ENST00000366767 SPATA4Q8NEY3 305 aa5.8□□□□□ -1.48
CDC42BPA-204ENST00000366767 TCP11Q8WWU5 503 aa5.8□□□□□ -1.48
CDC42BPA-204ENST00000366767 TMEM60Q9H2L4 133 aa5.8□□□□□ -1.48
CDC42BPA-204ENST00000366767 NOP53Q9NZM5 478 aaKnown RBP5.8□□□□□ -1.48
CDC42BPA-204ENST00000366767 KCND2Q9NZV8 630 aa5.8□□□□□ -1.48
CDC42BPA-204ENST00000366767 ZNF219Q9P2Y4 722 aaPredicted RBP5.8□□□□□ -1.48
CDC42BPA-204ENST00000366767 INTUQ9ULD6 942 aa5.8□□□□□ -1.48
CDC42BPA-204ENST00000366767 PARP4Q9UKK3 1724 aaKnown RBP5.8□□□□□ -1.48
CDC42BPA-204ENST00000366767 PFASO15067 1338 aa5.8□□□□□ -1.48
CDC42BPA-204ENST00000366767 FAM187AA6NFU0 413 aa5.79□□□□□ -1.48
CDC42BPA-204ENST00000366767 ATP1A1P05023 1023 aaKnown RBP5.79□□□□□ -1.48
CDC42BPA-204ENST00000366767 FDX1P10109 184 aa5.79□□□□□ -1.48
CDC42BPA-204ENST00000366767 STAT2P52630 851 aa5.79□□□□□ -1.48
CDC42BPA-204ENST00000366767 SNRPFP62306 86 aaKnown RBP5.79□□□□□ -1.48
CDC42BPA-204ENST00000366767 UAP1Q16222 522 aaPredicted RBP5.79□□□□□ -1.48
CDC42BPA-204ENST00000366767 DOK7Q18PE1 504 aa5.79□□□□□ -1.48
CDC42BPA-204ENST00000366767 KRT71Q3SY84 523 aa5.79□□□□□ -1.48
CDC42BPA-204ENST00000366767 TRAPPC11Q7Z392 1133 aa5.79□□□□□ -1.48
CDC42BPA-204ENST00000366767 LINC00116Q8NCU8 138 aa5.79□□□□□ -1.48
CDC42BPA-204ENST00000366767 SPDL1Q96EA4 605 aa5.79□□□□□ -1.48
CDC42BPA-204ENST00000366767 NBPF3Q9H094 633 aa5.79□□□□□ -1.48
CDC42BPA-204ENST00000366767 MAP3K7O43318 606 aa5.79□□□□□ -1.48
CDC42BPA-204ENST00000366767 CHMP2AO43633 222 aa5.79□□□□□ -1.48
CDC42BPA-204ENST00000366767 PDHBP11177 359 aa5.79□□□□□ -1.48
CDC42BPA-204ENST00000366767 STX2P32856 288 aa5.79□□□□□ -1.48
CDC42BPA-204ENST00000366767 BIRC3Q13489 604 aa5.79□□□□□ -1.48
CDC42BPA-204ENST00000366767 EPHA7Q15375 998 aa5.79□□□□□ -1.48
CDC42BPA-204ENST00000366767 WDR78Q5VTH9 848 aa5.79□□□□□ -1.48
CDC42BPA-204ENST00000366767 ANKRD20A3Q5VUR7 823 aa5.79□□□□□ -1.48
CDC42BPA-204ENST00000366767 ANKRD42Q8N9B4 389 aa5.79□□□□□ -1.48
CDC42BPA-204ENST00000366767 JDP2Q8WYK2 163 aa5.79□□□□□ -1.48
CDC42BPA-204ENST00000366767 FHOD1Q9Y613 1164 aa5.79□□□□□ -1.48
CDC42BPA-204ENST00000366767 FOXP2O15409 715 aa5.79□□□□□ -1.48
CDC42BPA-204ENST00000366767 GAS8O95995 478 aa5.79□□□□□ -1.48
CDC42BPA-204ENST00000366767 PLA2G4AP47712 749 aa5.79□□□□□ -1.48
CDC42BPA-204ENST00000366767 SNX16P57768 344 aa5.79□□□□□ -1.48
CDC42BPA-204ENST00000366767 YWHAEP62258 255 aaKnown RBP5.79□□□□□ -1.48
CDC42BPA-204ENST00000366767 ERVK-24P63145 666 aa5.79□□□□□ -1.48
CDC42BPA-204ENST00000366767 ARHGAP4P98171 946 aa5.79□□□□□ -1.48
CDC42BPA-204ENST00000366767 CYP27A1Q02318 531 aa5.79□□□□□ -1.48
CDC42BPA-204ENST00000366767 ARHGAP44Q17R89 818 aa5.79□□□□□ -1.48
CDC42BPA-204ENST00000366767 TTI2Q6NXR4 508 aa5.79□□□□□ -1.48
CDC42BPA-204ENST00000366767 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.79□□□□□ -1.48
CDC42BPA-204ENST00000366767 PALMDQ9NP74 551 aa5.79□□□□□ -1.48
CDC42BPA-204ENST00000366767 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.79□□□□□ -1.48
CDC42BPA-204ENST00000366767 CAMTA1Q9Y6Y1 1673 aa5.79□□□□□ -1.48
CDC42BPA-204ENST00000366767 CHD2O14647 1828 aaKnown RBP5.79□□□□□ -1.48
CDC42BPA-204ENST00000366767 K7ENM7 598 aa5.79□□□□□ -1.48
CDC42BPA-204ENST00000366767 PCYT1AP49585 367 aa5.79□□□□□ -1.48
CDC42BPA-204ENST00000366767 GUCY2FP51841 1108 aa5.79□□□□□ -1.48
CDC42BPA-204ENST00000366767 RWDD2BP57060 319 aa5.79□□□□□ -1.48
CDC42BPA-204ENST00000366767 KRT5P13647 590 aa5.79□□□□□ -1.48
CDC42BPA-204ENST00000366767 CRKP46108 304 aa5.79□□□□□ -1.48
CDC42BPA-204ENST00000366767 ODR4Q5SWX8 454 aa5.79□□□□□ -1.48
CDC42BPA-204ENST00000366767 GRAMD4Q6IC98 578 aa5.79□□□□□ -1.48
CDC42BPA-204ENST00000366767 ST13P4Q8IZP2 240 aaPredicted RBP5.79□□□□□ -1.48
CDC42BPA-204ENST00000366767 ANKRD13CQ8N6S4 541 aa5.79□□□□□ -1.48
CDC42BPA-204ENST00000366767 ATP2A3Q93084 1043 aa5.79□□□□□ -1.48
CDC42BPA-204ENST00000366767 CDHR1Q96JP9 859 aa5.79□□□□□ -1.48
CDC42BPA-204ENST00000366767 EIF2AQ9BY44 585 aaKnown RBP5.79□□□□□ -1.48
CDC42BPA-204ENST00000366767 PASKQ96RG2 1323 aa5.79□□□□□ -1.48
CDC42BPA-204ENST00000366767 BCL9LQ86UU0 1499 aa5.79□□□□□ -1.48
CDC42BPA-204ENST00000366767 I3L4J1 428 aa5.79□□□□□ -1.48
CDC42BPA-204ENST00000366767 RGS16O15492 202 aaPredicted RBP5.79□□□□□ -1.48
CDC42BPA-204ENST00000366767 CENPPQ6IPU0 288 aa5.79□□□□□ -1.48
CDC42BPA-204ENST00000366767 USP54Q70EL1 1684 aa5.79□□□□□ -1.48
CDC42BPA-204ENST00000366767 CCDC105Q8IYK2 499 aa5.79□□□□□ -1.48
CDC42BPA-204ENST00000366767 L1RE1Q9UN81 338 aa5.79□□□□□ -1.48
CDC42BPA-204ENST00000366767 NUB1Q9Y5A7 615 aa5.79□□□□□ -1.48
CDC42BPA-204ENST00000366767 ARHGAP42A6NI28 874 aa5.79□□□□□ -1.48
CDC42BPA-204ENST00000366767 EIF3DO15371 548 aaKnown RBP eCLIP5.79□□□□□ -1.48
CDC42BPA-204ENST00000366767 TDP2O95551 362 aa5.79□□□□□ -1.48
CDC42BPA-204ENST00000366767 SKIP12755 728 aa5.79□□□□□ -1.48
CDC42BPA-204ENST00000366767 PRELPP51888 382 aa5.79□□□□□ -1.48
CDC42BPA-204ENST00000366767 RNASE9P60153 205 aaKnown RBP5.79□□□□□ -1.48
CDC42BPA-204ENST00000366767 VSNL1P62760 191 aa5.79□□□□□ -1.48
CDC42BPA-204ENST00000366767 PLS1Q14651 629 aa5.79□□□□□ -1.48
CDC42BPA-204ENST00000366767 NFIXQ14938 502 aa5.79□□□□□ -1.48
CDC42BPA-204ENST00000366767 BEND6Q5SZJ8 279 aaPredicted RBP5.79□□□□□ -1.48
CDC42BPA-204ENST00000366767 FUT8Q9BYC5 575 aa5.79□□□□□ -1.48
CDC42BPA-204ENST00000366767 STK32BQ9NY57 414 aa5.79□□□□□ -1.48
CDC42BPA-204ENST00000366767 PALMO75781 387 aa5.79□□□□□ -1.48
CDC42BPA-204ENST00000366767 HDLBPQ00341 1268 aaKnown RBP5.79□□□□□ -1.48
CDC42BPA-204ENST00000366767 TBC1D16Q8TBP0 767 aa5.79□□□□□ -1.48
CDC42BPA-204ENST00000366767 TMEM260Q9NX78 707 aa5.79□□□□□ -1.48
CDC42BPA-204ENST00000366767 ADAMTS1Q9UHI8 967 aa5.79□□□□□ -1.48
CDC42BPA-204ENST00000366767 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.79□□□□□ -1.48
CDC42BPA-204ENST00000366767 MYMKA6NI61 221 aa5.78□□□□□ -1.48
CDC42BPA-204ENST00000366767 CES2O00748 559 aa5.78□□□□□ -1.48
CDC42BPA-204ENST00000366767 CYP2J2P51589 502 aa5.78□□□□□ -1.48
CDC42BPA-204ENST00000366767 PSMD7P51665 324 aa5.78□□□□□ -1.48
CDC42BPA-204ENST00000366767 LRIG3Q6UXM1 1119 aa5.78□□□□□ -1.48
CDC42BPA-204ENST00000366767 EXOC8Q8IYI6 725 aa5.78□□□□□ -1.48
CDC42BPA-204ENST00000366767 P3H4Q92791 437 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms