RNA–Protein interactions for RNA: ENST00000361337.2

TOP1-201, Transcript of DNA topoisomerase I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP1, Length 3,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1-201ENST00000361337 ARID5AQ03989 594 aa9.94□□□□□ -0.82
TOP1-201ENST00000361337 CFAP58Q5T655 872 aa9.94□□□□□ -0.82
TOP1-201ENST00000361337 ALS2CLQ60I27 953 aa9.94□□□□□ -0.82
TOP1-201ENST00000361337 DDX42Q86XP3 938 aaKnown RBP eCLIP9.94□□□□□ -0.82
TOP1-201ENST00000361337 ZBTB10Q96DT7 871 aa9.94□□□□□ -0.82
TOP1-201ENST00000361337 DEFB129Q9H1M3 183 aa9.94□□□□□ -0.82
TOP1-201ENST00000361337 GDF3Q9NR23 364 aa9.94□□□□□ -0.82
TOP1-201ENST00000361337 YDJCA8MPS7 323 aa9.93□□□□□ -0.82
TOP1-201ENST00000361337 PRLRP16471 622 aa9.93□□□□□ -0.82
TOP1-201ENST00000361337 NR1D1P20393 614 aa9.93□□□□□ -0.82
TOP1-201ENST00000361337 PAFAH1B1P43034 410 aa9.93□□□□□ -0.82
TOP1-201ENST00000361337 MRPL12P52815 198 aaKnown RBP9.93□□□□□ -0.82
TOP1-201ENST00000361337 ITIH3Q06033 890 aa9.93□□□□□ -0.82
TOP1-201ENST00000361337 TDRD12Q587J7 1177 aaKnown RBP9.93□□□□□ -0.82
TOP1-201ENST00000361337 NBPF12Q5TAG4 269 aaPredicted RBP9.93□□□□□ -0.82
TOP1-201ENST00000361337 C9orf131Q5VYM1 1079 aa9.93□□□□□ -0.82
TOP1-201ENST00000361337 APOBEC3HQ6NTF7 200 aaKnown RBP9.93□□□□□ -0.82
TOP1-201ENST00000361337 KLHL7Q8IXQ5 586 aa9.93□□□□□ -0.82
TOP1-201ENST00000361337 ALS2CR12Q96Q35 445 aa9.93□□□□□ -0.82
TOP1-201ENST00000361337 MYOZ2Q9NPC6 264 aa9.93□□□□□ -0.82
TOP1-201ENST00000361337 MAD2L2Q9UI95 211 aa9.93□□□□□ -0.82
TOP1-201ENST00000361337 CACNA1SQ13698 1873 aa9.93□□□□□ -0.82
TOP1-201ENST00000361337 MYMKA6NI61 221 aa9.93□□□□□ -0.82
TOP1-201ENST00000361337 LCA5LO95447 670 aa9.93□□□□□ -0.82
TOP1-201ENST00000361337 KLRC1P26715 233 aa9.93□□□□□ -0.82
TOP1-201ENST00000361337 PCK1P35558 622 aa9.93□□□□□ -0.82
TOP1-201ENST00000361337 ADCY7P51828 1080 aa9.93□□□□□ -0.82
TOP1-201ENST00000361337 GSCP56915 257 aaPredicted RBP9.93□□□□□ -0.82
TOP1-201ENST00000361337 CACNB1Q02641 598 aaPredicted RBP9.93□□□□□ -0.82
TOP1-201ENST00000361337 KCNMA1Q12791 1236 aa9.93□□□□□ -0.82
TOP1-201ENST00000361337 TMEM266Q2M3C6 531 aa9.93□□□□□ -0.82
TOP1-201ENST00000361337 FIGNQ5HY92 759 aa9.93□□□□□ -0.82
TOP1-201ENST00000361337 DACT2Q5SW24 774 aa9.93□□□□□ -0.82
TOP1-201ENST00000361337 CCT8L2Q96SF2 557 aa9.93□□□□□ -0.82
TOP1-201ENST00000361337 SH2D3AQ9BRG2 576 aa9.93□□□□□ -0.82
TOP1-201ENST00000361337 CSADQ9Y600 493 aa9.93□□□□□ -0.82
TOP1-201ENST00000361337 KIF13BQ9NQT8 1826 aa9.93□□□□□ -0.82
TOP1-201ENST00000361337 BICDL2A1A5D9 508 aa9.93□□□□□ -0.82
TOP1-201ENST00000361337 STXBP3O00186 592 aa9.93□□□□□ -0.82
TOP1-201ENST00000361337 RAD51CO43502 376 aa9.93□□□□□ -0.82
TOP1-201ENST00000361337 RANBP1P43487 201 aa9.93□□□□□ -0.82
TOP1-201ENST00000361337 EHHADHQ08426 723 aa9.93□□□□□ -0.82
TOP1-201ENST00000361337 RBBP5Q15291 538 aaKnown RBP9.93□□□□□ -0.82
TOP1-201ENST00000361337 PTGISQ16647 500 aa9.93□□□□□ -0.82
TOP1-201ENST00000361337 B4GALNT4Q76KP1 1039 aa9.93□□□□□ -0.82
TOP1-201ENST00000361337 MYCBPAPQ8TBZ2 947 aa9.93□□□□□ -0.82
TOP1-201ENST00000361337 OTUD5Q96G74 571 aa9.93□□□□□ -0.82
TOP1-201ENST00000361337 SELENOSQ9BQE4 189 aa9.93□□□□□ -0.82
TOP1-201ENST00000361337 NUDT12Q9BQG2 462 aa9.93□□□□□ -0.82
TOP1-201ENST00000361337 EPN3Q9H201 632 aa9.93□□□□□ -0.82
TOP1-201ENST00000361337 PPP1R37O75864 691 aa9.92□□□□□ -0.82
TOP1-201ENST00000361337 BMP3P12645 472 aa9.92□□□□□ -0.82
TOP1-201ENST00000361337 ELF1P32519 619 aa9.92□□□□□ -0.82
TOP1-201ENST00000361337 QPCTQ16769 361 aa9.92□□□□□ -0.82
TOP1-201ENST00000361337 KDM7AQ6ZMT4 941 aa9.92□□□□□ -0.82
TOP1-201ENST00000361337 RNF217Q8TC41 542 aa9.92□□□□□ -0.82
TOP1-201ENST00000361337 LBHD1Q9BQE6 289 aaPredicted RBP9.92□□□□□ -0.82
TOP1-201ENST00000361337 FGFBP2Q9BYJ0 223 aa9.92□□□□□ -0.82
TOP1-201ENST00000361337 HACL1Q9UJ83 578 aa9.92□□□□□ -0.82
TOP1-201ENST00000361337 TESPA1A2RU30 521 aaPredicted RBP9.92□□□□□ -0.82
TOP1-201ENST00000361337 DCDC2CA8MYV0 355 aa9.92□□□□□ -0.82
TOP1-201ENST00000361337 ORC4O43929 436 aa9.92□□□□□ -0.82
TOP1-201ENST00000361337 TMOD1P28289 359 aa9.92□□□□□ -0.82
TOP1-201ENST00000361337 HMGCS2P54868 508 aa9.92□□□□□ -0.82
TOP1-201ENST00000361337 NONOQ15233 471 aaKnown RBP eCLIP9.92□□□□□ -0.82
TOP1-201ENST00000361337 CENPPQ6IPU0 288 aa9.92□□□□□ -0.82
TOP1-201ENST00000361337 MOB2Q70IA6 237 aa9.92□□□□□ -0.82
TOP1-201ENST00000361337 KCNK18Q7Z418 384 aa9.92□□□□□ -0.82
TOP1-201ENST00000361337 TBCKQ8TEA7 893 aa9.92□□□□□ -0.82
TOP1-201ENST00000361337 UPF1Q92900 1129 aaKnown RBP eCLIP9.92□□□□□ -0.82
TOP1-201ENST00000361337 NEUROG2Q9H2A3 272 aa9.92□□□□□ -0.82
TOP1-201ENST00000361337 BLOC1S4Q9NUP1 217 aa9.92□□□□□ -0.82
TOP1-201ENST00000361337 TMOD4Q9NZQ9 345 aa9.92□□□□□ -0.82
TOP1-201ENST00000361337 GINS2Q9Y248 185 aa9.92□□□□□ -0.82
TOP1-201ENST00000361337 PLAAQ9Y263 795 aa9.92□□□□□ -0.82
TOP1-201ENST00000361337 WNT10BO00744 389 aa9.92□□□□□ -0.82
TOP1-201ENST00000361337 IL1R1P14778 569 aa9.92□□□□□ -0.82
TOP1-201ENST00000361337 FLT3P36888 993 aa9.92□□□□□ -0.82
TOP1-201ENST00000361337 ITGB3BPQ13352 177 aaPredicted RBP9.92□□□□□ -0.82
TOP1-201ENST00000361337 PDXDC1Q6P996 788 aa9.92□□□□□ -0.82
TOP1-201ENST00000361337 NLRP14Q86W24 1093 aa9.92□□□□□ -0.82
TOP1-201ENST00000361337 FBXO11Q86XK2 927 aa9.92□□□□□ -0.82
TOP1-201ENST00000361337 NOX5Q96PH1 765 aa9.92□□□□□ -0.82
TOP1-201ENST00000361337 C7orf25Q9BPX7 421 aa9.92□□□□□ -0.82
TOP1-201ENST00000361337 NOL4O94818 638 aa9.91□□□□□ -0.82
TOP1-201ENST00000361337 FSBPO95073 299 aa9.91□□□□□ -0.82
TOP1-201ENST00000361337 OR52Z1P0C646 297 aa9.91□□□□□ -0.82
TOP1-201ENST00000361337 ECHS1P30084 290 aa9.91□□□□□ -0.82
TOP1-201ENST00000361337 ERVK-9P63128 1117 aa9.91□□□□□ -0.82
TOP1-201ENST00000361337 CFAP221Q4G0U5 840 aa9.91□□□□□ -0.82
TOP1-201ENST00000361337 LRRC55Q6ZSA7 311 aa9.91□□□□□ -0.82
TOP1-201ENST00000361337 IFT20Q8IY31 132 aa9.91□□□□□ -0.82
TOP1-201ENST00000361337 CALML4Q96GE6 196 aa9.91□□□□□ -0.82
TOP1-201ENST00000361337 PAIP2Q9BPZ3 127 aaKnown RBP9.91□□□□□ -0.82
TOP1-201ENST00000361337 DHX36Q9H2U1 1008 aaKnown RBP9.91□□□□□ -0.82
TOP1-201ENST00000361337 RAVER2Q9HCJ3 691 aaKnown RBP9.91□□□□□ -0.82
TOP1-201ENST00000361337 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.91□□□□□ -0.825e-7■■■■■ 64
TOP1-201ENST00000361337 MTMR4Q9NYA4 1195 aa9.91□□□□□ -0.82
TOP1-201ENST00000361337 DONSONQ9NYP3 566 aa9.91□□□□□ -0.82
TOP1-201ENST00000361337 CCPG1Q9ULG6 757 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms