RNA–Protein interactions for RNA: ENST00000361162.10

RBM39-203, Transcript of RNA binding motif protein 39, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RBM39, Length 2,831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-203ENST00000361162 PCDHA6Q9UN73 950 aa13.32□□□□□ -0.28
RBM39-203ENST00000361162 PCDHGC5Q9Y5F6 944 aa13.32□□□□□ -0.28
RBM39-203ENST00000361162 PCDHA8Q9Y5H6 950 aa13.32□□□□□ -0.28
RBM39-203ENST00000361162 MYMKA6NI61 221 aa13.32□□□□□ -0.28
RBM39-203ENST00000361162 CCNT1O60563 726 aaKnown RBP13.32□□□□□ -0.28
RBM39-203ENST00000361162 CYP2D6P10635 497 aa13.32□□□□□ -0.28
RBM39-203ENST00000361162 GHRP10912 638 aa13.32□□□□□ -0.28
RBM39-203ENST00000361162 AGBL2Q5U5Z8 902 aa13.32□□□□□ -0.28
RBM39-203ENST00000361162 C3orf20Q8ND61 904 aa13.32□□□□□ -0.28
RBM39-203ENST00000361162 WDR66Q8TBY9 1149 aa13.32□□□□□ -0.28
RBM39-203ENST00000361162 SCFD2Q8WU76 684 aa13.32□□□□□ -0.28
RBM39-203ENST00000361162 C7orf43Q8WVR3 580 aa13.32□□□□□ -0.28
RBM39-203ENST00000361162 FAM129AQ9BZQ8 928 aa13.32□□□□□ -0.28
RBM39-203ENST00000361162 PCDHA4Q9UN74 947 aa13.32□□□□□ -0.28
RBM39-203ENST00000361162 NOC2LQ9Y3T9 749 aaKnown RBP13.32□□□□□ -0.28
RBM39-203ENST00000361162 FLT1P17948 1338 aa13.32□□□□□ -0.28
RBM39-203ENST00000361162 LTBP3Q9NS15 1303 aa13.32□□□□□ -0.28
RBM39-203ENST00000361162 SSU72P8A0A1W2PR75 194 aa13.31□□□□□ -0.28
RBM39-203ENST00000361162 SERPING1P05155 500 aa13.31□□□□□ -0.28
RBM39-203ENST00000361162 PAEPP09466 180 aa13.31□□□□□ -0.28
RBM39-203ENST00000361162 CALRP27797 417 aaKnown RBP13.31□□□□□ -0.28
RBM39-203ENST00000361162 LRRC14Q15048 493 aa13.31□□□□□ -0.28
RBM39-203ENST00000361162 TRIM68Q6AZZ1 485 aa13.31□□□□□ -0.28
RBM39-203ENST00000361162 CNNM4Q6P4Q7 775 aa13.31□□□□□ -0.28
RBM39-203ENST00000361162 TRPM8Q7Z2W7 1104 aa13.31□□□□□ -0.28
RBM39-203ENST00000361162 MGARPQ8TDB4 240 aa13.31□□□□□ -0.28
RBM39-203ENST00000361162 COA1Q9GZY4 146 aa13.31□□□□□ -0.28
RBM39-203ENST00000361162 MLXIPLQ9NP71 852 aa13.31□□□□□ -0.28
RBM39-203ENST00000361162 SLC12A4Q9UP95 1085 aa13.31□□□□□ -0.28
RBM39-203ENST00000361162 DICER1Q9UPY3 1922 aaKnown RBP13.31□□□□□ -0.28
RBM39-203ENST00000361162 IGF2BP3O00425 579 aaKnown RBP eCLIP13.31□□□□□ -0.28
RBM39-203ENST00000361162 ACTN1P12814 892 aa13.31□□□□□ -0.28
RBM39-203ENST00000361162 HIBADHP31937 336 aaKnown RBP13.31□□□□□ -0.28
RBM39-203ENST00000361162 MAP2K1Q02750 393 aaPredicted RBP13.31□□□□□ -0.28
RBM39-203ENST00000361162 PRPF4BQ13523 1007 aaKnown RBP13.31□□□□□ -0.28
RBM39-203ENST00000361162 SLC18A3Q16572 532 aa13.31□□□□□ -0.28
RBM39-203ENST00000361162 DEFB132Q7Z7B7 95 aa13.31□□□□□ -0.28
RBM39-203ENST00000361162 L3MBTL3Q96JM7 780 aaPredicted RBP13.31□□□□□ -0.28
RBM39-203ENST00000361162 TRAF5O00463 557 aa13.31□□□□□ -0.28
RBM39-203ENST00000361162 KIF3CO14782 793 aa13.31□□□□□ -0.28
RBM39-203ENST00000361162 CALM1P0DP23 149 aa13.31□□□□□ -0.28
RBM39-203ENST00000361162 CALM2P0DP24 149 aa13.31□□□□□ -0.28
RBM39-203ENST00000361162 CALM3P0DP25 149 aa13.31□□□□□ -0.28
RBM39-203ENST00000361162 POLD1P28340 1107 aa13.31□□□□□ -0.28
RBM39-203ENST00000361162 TXKP42681 527 aa13.31□□□□□ -0.28
RBM39-203ENST00000361162 CDCA2Q69YH5 1023 aaPredicted RBP13.31□□□□□ -0.28
RBM39-203ENST00000361162 MIS18BP1Q6P0N0 1132 aa13.31□□□□□ -0.28
RBM39-203ENST00000361162 TAX1BP1Q86VP1 789 aa13.31□□□□□ -0.28
RBM39-203ENST00000361162 C7orf25Q9BPX7 421 aa13.31□□□□□ -0.28
RBM39-203ENST00000361162 AZI2Q9H6S1 392 aa13.31□□□□□ -0.28
RBM39-203ENST00000361162 NOP53Q9NZM5 478 aaKnown RBP13.31□□□□□ -0.28
RBM39-203ENST00000361162 SWAP70Q9UH65 585 aa13.31□□□□□ -0.28
RBM39-203ENST00000361162 COL2A1P02458 1487 aaPredicted RBP13.3□□□□□ -0.28
RBM39-203ENST00000361162 MYH2Q9UKX2 1941 aa13.3□□□□□ -0.28
RBM39-203ENST00000361162 GOLGA8HP0CJ92 632 aa13.3□□□□□ -0.28
RBM39-203ENST00000361162 GPSM2P81274 684 aa13.3□□□□□ -0.28
RBM39-203ENST00000361162 DAAM2Q86T65 1068 aa13.3□□□□□ -0.28
RBM39-203ENST00000361162 NELFCDQ8IXH7 590 aa13.3□□□□□ -0.28
RBM39-203ENST00000361162 SLC17A8Q8NDX2 589 aa13.3□□□□□ -0.28
RBM39-203ENST00000361162 GLG1Q92896 1179 aa13.3□□□□□ -0.28
RBM39-203ENST00000361162 MTA3Q9BTC8 594 aa13.3□□□□□ -0.28
RBM39-203ENST00000361162 MRIQ9BWK5 157 aa13.3□□□□□ -0.28
RBM39-203ENST00000361162 TMX4Q9H1E5 349 aaPredicted RBP13.3□□□□□ -0.28
RBM39-203ENST00000361162 ECT2Q9H8V3 914 aa13.3□□□□□ -0.28
RBM39-203ENST00000361162 SAMD15Q9P1V8 674 aa13.3□□□□□ -0.28
RBM39-203ENST00000361162 PNMA3Q9UL41 463 aa13.3□□□□□ -0.28
RBM39-203ENST00000361162 FOXO6A8MYZ6 492 aa13.3□□□□□ -0.28
RBM39-203ENST00000361162 RBAK-RBAKDNI3L0D1 243 aa13.3□□□□□ -0.28
RBM39-203ENST00000361162 EVI5O60447 810 aa13.3□□□□□ -0.28
RBM39-203ENST00000361162 KRT16P08779 473 aa13.3□□□□□ -0.28
RBM39-203ENST00000361162 CALML3P27482 149 aa13.3□□□□□ -0.28
RBM39-203ENST00000361162 AP1ARQ63HQ0 302 aa13.3□□□□□ -0.28
RBM39-203ENST00000361162 LRRC55Q6ZSA7 311 aa13.3□□□□□ -0.28
RBM39-203ENST00000361162 ARMC9Q7Z3E5 817 aa13.3□□□□□ -0.28
RBM39-203ENST00000361162 TBC1D16Q8TBP0 767 aa13.3□□□□□ -0.28
RBM39-203ENST00000361162 CALR3Q96L12 384 aaKnown RBP13.3□□□□□ -0.28
RBM39-203ENST00000361162 MMTAG2Q9BU76 263 aaKnown RBP13.3□□□□□ -0.28
RBM39-203ENST00000361162 INTS9Q9NV88 658 aaKnown RBP13.3□□□□□ -0.28
RBM39-203ENST00000361162 PGRMC1O00264 195 aaKnown RBP13.29□□□□□ -0.28
RBM39-203ENST00000361162 IRF6O14896 467 aa13.29□□□□□ -0.28
RBM39-203ENST00000361162 SMNDC1O75940 238 aaKnown RBP eCLIP13.29□□□□□ -0.288e-11■■■□□ 15.9
RBM39-203ENST00000361162 DDAH1O94760 285 aa13.29□□□□□ -0.28
RBM39-203ENST00000361162 NQO1P15559 274 aaKnown RBP13.29□□□□□ -0.28
RBM39-203ENST00000361162 GYG1P46976 350 aa13.29□□□□□ -0.28
RBM39-203ENST00000361162 PLTPP55058 493 aa13.29□□□□□ -0.28
RBM39-203ENST00000361162 PTK2Q05397 1052 aa13.29□□□□□ -0.28
RBM39-203ENST00000361162 GNPTABQ3T906 1256 aa13.29□□□□□ -0.28
RBM39-203ENST00000361162 PIGWQ7Z7B1 504 aa13.29□□□□□ -0.28
RBM39-203ENST00000361162 ADAM7Q9H2U9 754 aa13.29□□□□□ -0.28
RBM39-203ENST00000361162 TSPY2A6NKD2 308 aa13.29□□□□□ -0.28
RBM39-203ENST00000361162 SPDYE3A6NKU9 549 aa13.29□□□□□ -0.28
RBM39-203ENST00000361162 MYL1P05976 194 aa13.29□□□□□ -0.28
RBM39-203ENST00000361162 ABL2P42684 1182 aa13.29□□□□□ -0.28
RBM39-203ENST00000361162 NCALDP61601 193 aa13.29□□□□□ -0.28
RBM39-203ENST00000361162 GSTO1P78417 241 aa13.29□□□□□ -0.28
RBM39-203ENST00000361162 MTMR3Q13615 1198 aa13.29□□□□□ -0.28
RBM39-203ENST00000361162 ATXN2LQ8WWM7 1075 aaKnown RBP13.29□□□□□ -0.28
RBM39-203ENST00000361162 TLCD1Q96CP7 247 aa13.29□□□□□ -0.28
RBM39-203ENST00000361162 LUC7LQ9NQ29 371 aaKnown RBP13.29□□□□□ -0.28
RBM39-203ENST00000361162 SLC5A4Q9NY91 659 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms