RNA–Protein interactions for RNA: ENST00000357890.9

RNF40-202, Transcript of ring finger protein 40, humanhuman

TSL 2 BASIC

Gene RNF40, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-202ENST00000357890 PRCCQ92733 491 aaPredicted RBP10.84□□□□□ -0.67
RNF40-202ENST00000357890 HOOK2Q96ED9 719 aa10.84□□□□□ -0.67
RNF40-202ENST00000357890 CD209Q9NNX6 404 aa10.84□□□□□ -0.67
RNF40-202ENST00000357890 NUP98P52948 1817 aa10.84□□□□□ -0.67
RNF40-202ENST00000357890 RAD51CO43502 376 aa10.83□□□□□ -0.68
RNF40-202ENST00000357890 CYTH3O43739 400 aa10.83□□□□□ -0.68
RNF40-202ENST00000357890 GNAT1P11488 350 aa10.83□□□□□ -0.68
RNF40-202ENST00000357890 LRRC63Q05C16 580 aa10.83□□□□□ -0.68
RNF40-202ENST00000357890 ORC2Q13416 577 aaPredicted RBP10.83□□□□□ -0.68
RNF40-202ENST00000357890 ASPRV1Q53RT3 343 aa10.83□□□□□ -0.68
RNF40-202ENST00000357890 BATF3Q9NR55 127 aa10.83□□□□□ -0.68
RNF40-202ENST00000357890 PCDHB13Q9Y5F0 798 aa10.83□□□□□ -0.68
RNF40-202ENST00000357890 ABCB4P21439 1286 aa10.83□□□□□ -0.68
RNF40-202ENST00000357890 TRADDQ15628 312 aa10.83□□□□□ -0.68
RNF40-202ENST00000357890 GLE1Q53GS7 698 aaKnown RBP10.83□□□□□ -0.68
RNF40-202ENST00000357890 SEPT14Q6ZU15 432 aa10.83□□□□□ -0.68
RNF40-202ENST00000357890 CASKIN2Q8WXE0 1202 aa10.83□□□□□ -0.68
RNF40-202ENST00000357890 ERGIC2Q96RQ1 377 aa10.83□□□□□ -0.68
RNF40-202ENST00000357890 TAOK3Q9H2K8 898 aa10.83□□□□□ -0.68
RNF40-202ENST00000357890 TAF1DQ9H5J8 278 aaPredicted RBP10.83□□□□□ -0.68
RNF40-202ENST00000357890 PVALEFA0A1B0GWK0 134 aa10.83□□□□□ -0.68
RNF40-202ENST00000357890 CCT8L1PA6NM43 557 aa10.83□□□□□ -0.68
RNF40-202ENST00000357890 RGL2O15211 777 aa10.83□□□□□ -0.68
RNF40-202ENST00000357890 SUN1O94901 812 aa10.83□□□□□ -0.68
RNF40-202ENST00000357890 GTF2IP78347 998 aa10.83□□□□□ -0.68
RNF40-202ENST00000357890 ZBTB16Q05516 673 aa10.83□□□□□ -0.68
RNF40-202ENST00000357890 NFIXQ14938 502 aa10.83□□□□□ -0.68
RNF40-202ENST00000357890 QPCTQ16769 361 aa10.83□□□□□ -0.68
RNF40-202ENST00000357890 DPP8Q6V1X1 898 aaPredicted RBP10.83□□□□□ -0.68
RNF40-202ENST00000357890 ZC3H12CQ9C0D7 883 aaKnown RBP10.83□□□□□ -0.68
RNF40-202ENST00000357890 SEMA6BQ9H3T3 888 aa10.83□□□□□ -0.68
RNF40-202ENST00000357890 PSTPIP2Q9H939 334 aa10.83□□□□□ -0.68
RNF40-202ENST00000357890 RIC8AQ9NPQ8 531 aa10.83□□□□□ -0.68
RNF40-202ENST00000357890 KLHL14Q9P2G3 628 aa10.83□□□□□ -0.68
RNF40-202ENST00000357890 ARMCX3Q9UH62 379 aaPredicted RBP10.83□□□□□ -0.68
RNF40-202ENST00000357890 AMACRQ9UHK6 382 aa10.83□□□□□ -0.68
RNF40-202ENST00000357890 COL1A1P02452 1464 aaPredicted RBP10.82□□□□□ -0.68
RNF40-202ENST00000357890 EME2A4GXA9 379 aaPredicted RBP10.82□□□□□ -0.68
RNF40-202ENST00000357890 SPDYE3A6NKU9 549 aa10.82□□□□□ -0.68
RNF40-202ENST00000357890 NR2F2P24468 414 aa10.82□□□□□ -0.68
RNF40-202ENST00000357890 STX2P32856 288 aa10.82□□□□□ -0.68
RNF40-202ENST00000357890 GRIPAP1Q4V328 841 aa10.82□□□□□ -0.68
RNF40-202ENST00000357890 GUF1Q8N442 669 aaKnown RBP10.82□□□□□ -0.68
RNF40-202ENST00000357890 ERMNQ8TAM6 284 aa10.82□□□□□ -0.68
RNF40-202ENST00000357890 NAP1L4Q99733 375 aaKnown RBP10.82□□□□□ -0.68
RNF40-202ENST00000357890 ETAA1Q9NY74 926 aa10.82□□□□□ -0.68
RNF40-202ENST00000357890 MTRF1LQ9UGC7 380 aaKnown RBP10.82□□□□□ -0.68
RNF40-202ENST00000357890 INTUQ9ULD6 942 aa10.82□□□□□ -0.68
RNF40-202ENST00000357890 TOGARAM1Q9Y4F4 1720 aa10.82□□□□□ -0.68
RNF40-202ENST00000357890 IGF2BP3O00425 579 aaKnown RBP eCLIP10.82□□□□□ -0.68
RNF40-202ENST00000357890 DNM1LO00429 736 aa10.82□□□□□ -0.68
RNF40-202ENST00000357890 KLRC4O43908 158 aa10.82□□□□□ -0.68
RNF40-202ENST00000357890 SERPING1P05155 500 aa10.82□□□□□ -0.68
RNF40-202ENST00000357890 RAD23BP54727 409 aa10.82□□□□□ -0.68
RNF40-202ENST00000357890 SKOR1P84550 965 aa10.82□□□□□ -0.68
RNF40-202ENST00000357890 PLCB4Q15147 1175 aa10.82□□□□□ -0.68
RNF40-202ENST00000357890 PPP4R3AQ6IN85 833 aa10.82□□□□□ -0.68
RNF40-202ENST00000357890 ARMC9Q7Z3E5 817 aa10.82□□□□□ -0.68
RNF40-202ENST00000357890 PPFIBP2Q8ND30 876 aa10.82□□□□□ -0.68
RNF40-202ENST00000357890 SH3GL2Q99962 352 aa10.82□□□□□ -0.68
RNF40-202ENST00000357890 NT5C3AQ9H0P0 336 aa10.82□□□□□ -0.68
RNF40-202ENST00000357890 DNAJC17Q9NVM6 304 aaKnown RBP10.82□□□□□ -0.68
RNF40-202ENST00000357890 NKIRAS1Q9NYS0 192 aa10.82□□□□□ -0.68
RNF40-202ENST00000357890 EPHB6O15197 1021 aa10.82□□□□□ -0.68
RNF40-202ENST00000357890 FLOT1O75955 427 aa10.82□□□□□ -0.68
RNF40-202ENST00000357890 ATP2A2P16615 1042 aaKnown RBP10.82□□□□□ -0.68
RNF40-202ENST00000357890 HSD17B3P37058 310 aa10.82□□□□□ -0.68
RNF40-202ENST00000357890 MEA1Q16626 185 aa10.82□□□□□ -0.68
RNF40-202ENST00000357890 FAM182BQ5T319 152 aa10.82□□□□□ -0.68
RNF40-202ENST00000357890 C16orf86Q6ZW13 317 aa10.82□□□□□ -0.68
RNF40-202ENST00000357890 KIAA0895Q8NCT3 520 aa10.82□□□□□ -0.68
RNF40-202ENST00000357890 SLC17A8Q8NDX2 589 aa10.82□□□□□ -0.68
RNF40-202ENST00000357890 E9PMD0 336 aa10.81□□□□□ -0.68
RNF40-202ENST00000357890 XRCC5P13010 732 aaKnown RBP10.81□□□□□ -0.68
RNF40-202ENST00000357890 CHN1P15882 459 aa10.81□□□□□ -0.68
RNF40-202ENST00000357890 FECHP22830 423 aa10.81□□□□□ -0.68
RNF40-202ENST00000357890 CYP4A11Q02928 519 aa10.81□□□□□ -0.68
RNF40-202ENST00000357890 PABPC4Q13310 644 aaKnown RBP eCLIP10.81□□□□□ -0.683e-8■■■■□ 19.4
RNF40-202ENST00000357890 CREG2Q8IUH2 290 aa10.81□□□□□ -0.68
RNF40-202ENST00000357890 CLEC10AQ8IUN9 316 aa10.81□□□□□ -0.68
RNF40-202ENST00000357890 PRMT1Q99873 361 aaKnown RBP10.81□□□□□ -0.68
RNF40-202ENST00000357890 STMN4Q9H169 189 aaPredicted RBP10.81□□□□□ -0.68
RNF40-202ENST00000357890 AZI2Q9H6S1 392 aa10.81□□□□□ -0.68
RNF40-202ENST00000357890 ETNK1Q9HBU6 452 aa10.81□□□□□ -0.68
RNF40-202ENST00000357890 RASAL2Q9UJF2 1139 aa10.81□□□□□ -0.68
RNF40-202ENST00000357890 TIAM2Q8IVF5 1701 aa10.81□□□□□ -0.68
RNF40-202ENST00000357890 MEIS1O00470 390 aa10.81□□□□□ -0.68
RNF40-202ENST00000357890 VPS41P49754 854 aa10.81□□□□□ -0.68
RNF40-202ENST00000357890 PLS1Q14651 629 aa10.81□□□□□ -0.68
RNF40-202ENST00000357890 KCTD1Q719H9 257 aa10.81□□□□□ -0.68
RNF40-202ENST00000357890 CCHCR1Q8TD31 782 aa10.81□□□□□ -0.68
RNF40-202ENST00000357890 U2AF1L4Q8WU68 220 aaKnown RBP10.81□□□□□ -0.68
RNF40-202ENST00000357890 STMN2Q93045 179 aa10.81□□□□□ -0.68
RNF40-202ENST00000357890 EMILIN3Q9NT22 766 aa10.81□□□□□ -0.68
RNF40-202ENST00000357890 TBK1Q9UHD2 729 aa10.81□□□□□ -0.68
RNF40-202ENST00000357890 C15orf41Q9Y2V0 281 aa10.81□□□□□ -0.68
RNF40-202ENST00000357890 MYO5AQ9Y4I1 1855 aaKnown RBP10.81□□□□□ -0.68
RNF40-202ENST00000357890 MYH2Q9UKX2 1941 aa10.81□□□□□ -0.68
RNF40-202ENST00000357890 DUOX1Q9NRD9 1551 aa10.81□□□□□ -0.68
RNF40-202ENST00000357890 BCL9LQ86UU0 1499 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms