RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 GMNCA6NCL1 334 aa19.3■□□□□ 0.68
RTN4-204ENST00000357732 SPIRE1Q08AE8 756 aa19.3■□□□□ 0.68
RTN4-204ENST00000357732 TAX1BP1Q86VP1 789 aa19.3■□□□□ 0.68
RTN4-204ENST00000357732 CRYGNQ8WXF5 182 aa19.3■□□□□ 0.68
RTN4-204ENST00000357732 NAP1L3Q99457 506 aaPredicted RBP19.3■□□□□ 0.68
RTN4-204ENST00000357732 VCPKMTQ9H867 229 aa19.3■□□□□ 0.68
RTN4-204ENST00000357732 TAF1LQ8IZX4 1826 aa19.3■□□□□ 0.68
RTN4-204ENST00000357732 LTBP4Q8N2S1 1624 aa19.3■□□□□ 0.68
RTN4-204ENST00000357732 NCANO14594 1321 aa19.29■□□□□ 0.68
RTN4-204ENST00000357732 NPHP3-ACAD11A0A0J9YXS1 232 aa19.29■□□□□ 0.68
RTN4-204ENST00000357732 E7EVH7 732 aa19.29■□□□□ 0.68
RTN4-204ENST00000357732 TRAPPC3O43617 180 aa19.29■□□□□ 0.68
RTN4-204ENST00000357732 BBOX1O75936 387 aa19.29■□□□□ 0.68
RTN4-204ENST00000357732 ACTN3Q08043 901 aaPredicted RBP19.29■□□□□ 0.68
RTN4-204ENST00000357732 TRADDQ15628 312 aa19.29■□□□□ 0.68
RTN4-204ENST00000357732 CCDC91Q7Z6B0 441 aa19.29■□□□□ 0.68
RTN4-204ENST00000357732 NT5DC3Q86UY8 548 aa19.29■□□□□ 0.68
RTN4-204ENST00000357732 ETNPPLQ8TBG4 499 aa19.29■□□□□ 0.68
RTN4-204ENST00000357732 RBM46Q8TBY0 533 aaKnown RBP19.29■□□□□ 0.68
RTN4-204ENST00000357732 RBM17Q96I25 401 aaKnown RBP19.29■□□□□ 0.68
RTN4-204ENST00000357732 FAM20AQ96MK3 541 aa19.29■□□□□ 0.68
RTN4-204ENST00000357732 RAB17Q9H0T7 212 aa19.29■□□□□ 0.68
RTN4-204ENST00000357732 CNOT10Q9H9A5 744 aaKnown RBP19.29■□□□□ 0.68
RTN4-204ENST00000357732 UTP11Q9Y3A2 253 aaKnown RBP19.29■□□□□ 0.68
RTN4-204ENST00000357732 USP17L10C9JJH3 530 aa19.29■□□□□ 0.68
RTN4-204ENST00000357732 ACTN1P12814 892 aa19.29■□□□□ 0.68
RTN4-204ENST00000357732 LMNB1P20700 586 aa19.29■□□□□ 0.68
RTN4-204ENST00000357732 RNASE9P60153 205 aaKnown RBP19.29■□□□□ 0.68
RTN4-204ENST00000357732 PPP2R2AP63151 447 aa19.29■□□□□ 0.68
RTN4-204ENST00000357732 GTF2IP78347 998 aa19.29■□□□□ 0.68
RTN4-204ENST00000357732 KCNV1Q6PIU1 500 aa19.29■□□□□ 0.68
RTN4-204ENST00000357732 CATSPER3Q86XQ3 398 aa19.29■□□□□ 0.68
RTN4-204ENST00000357732 TEX2Q8IWB9 1127 aa19.29■□□□□ 0.68
RTN4-204ENST00000357732 CYFIP2Q96F07 1278 aa19.29■□□□□ 0.68
RTN4-204ENST00000357732 KANSL2Q9H9L4 492 aa19.29■□□□□ 0.68
RTN4-204ENST00000357732 SIX2Q9NPC8 291 aa19.29■□□□□ 0.68
RTN4-204ENST00000357732 OLFML3Q9NRN5 406 aa19.29■□□□□ 0.68
RTN4-204ENST00000357732 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.28■□□□□ 0.68
RTN4-204ENST00000357732 C5orf60A6NFR6 353 aa19.28■□□□□ 0.68
RTN4-204ENST00000357732 TMCO5BA8MYB1 307 aa19.28■□□□□ 0.68
RTN4-204ENST00000357732 C6orf229H3BNL8 230 aa19.28■□□□□ 0.68
RTN4-204ENST00000357732 CCDC172P0C7W6 258 aa19.28■□□□□ 0.68
RTN4-204ENST00000357732 GAP43P17677 238 aa19.28■□□□□ 0.68
RTN4-204ENST00000357732 STAT1P42224 750 aa19.28■□□□□ 0.68
RTN4-204ENST00000357732 SMTNP53814 917 aa19.28■□□□□ 0.68
RTN4-204ENST00000357732 ENOX2Q16206 610 aaKnown RBP19.28■□□□□ 0.68
RTN4-204ENST00000357732 FBXW10Q5XX13 1052 aa19.28■□□□□ 0.68
RTN4-204ENST00000357732 TTBK2Q6IQ55 1244 aa19.28■□□□□ 0.68
RTN4-204ENST00000357732 TMC3Q7Z5M5 1100 aa19.28■□□□□ 0.68
RTN4-204ENST00000357732 DCAF4Q8WV16 495 aa19.28■□□□□ 0.68
RTN4-204ENST00000357732 SLC35C1Q96A29 364 aa19.28■□□□□ 0.68
RTN4-204ENST00000357732 TACO1Q9BSH4 297 aaKnown RBP19.28■□□□□ 0.68
RTN4-204ENST00000357732 DDX4Q9NQI0 724 aaKnown RBP19.28■□□□□ 0.68
RTN4-204ENST00000357732 LRRC4BQ9NT99 713 aa19.28■□□□□ 0.68
RTN4-204ENST00000357732 GEMIN8Q9NWZ8 242 aaKnown RBP19.28■□□□□ 0.68
RTN4-204ENST00000357732 POTEFA5A3E0 1075 aa19.28■□□□□ 0.68
RTN4-204ENST00000357732 F8W031 263 aaPredicted RBP19.28■□□□□ 0.68
RTN4-204ENST00000357732 EIF3DO15371 548 aaKnown RBP eCLIP19.28■□□□□ 0.68
RTN4-204ENST00000357732 PPP1R12BO60237 982 aaPredicted RBP19.28■□□□□ 0.68
RTN4-204ENST00000357732 FOSP01100 380 aaPredicted RBP19.28■□□□□ 0.68
RTN4-204ENST00000357732 NR3C1P04150 777 aa19.28■□□□□ 0.68
RTN4-204ENST00000357732 POTEIP0CG38 1075 aa19.28■□□□□ 0.68
RTN4-204ENST00000357732 HDLBPQ00341 1268 aaKnown RBP19.28■□□□□ 0.68
RTN4-204ENST00000357732 POTEGQ6S5H5 508 aa19.28■□□□□ 0.68
RTN4-204ENST00000357732 POTEEQ6S8J3 1075 aa19.28■□□□□ 0.68
RTN4-204ENST00000357732 RPAINQ86UA6 219 aa19.28■□□□□ 0.68
RTN4-204ENST00000357732 SFR1Q86XK3 245 aa19.28■□□□□ 0.68
RTN4-204ENST00000357732 REEP2Q9BRK0 252 aa19.28■□□□□ 0.68
RTN4-204ENST00000357732 MKNK1Q9BUB5 465 aa19.28■□□□□ 0.68
RTN4-204ENST00000357732 ZHX3Q9H4I2 956 aa19.28■□□□□ 0.68
RTN4-204ENST00000357732 AMFRQ9UKV5 643 aa19.28■□□□□ 0.68
RTN4-204ENST00000357732 MYO1FO00160 1098 aa19.27■□□□□ 0.68
RTN4-204ENST00000357732 TULP1O00294 542 aaPredicted RBP19.27■□□□□ 0.68
RTN4-204ENST00000357732 AKAP3O75969 853 aa19.27■□□□□ 0.68
RTN4-204ENST00000357732 SERPINB2P05120 415 aa19.27■□□□□ 0.68
RTN4-204ENST00000357732 HLA-DOAP06340 250 aa19.27■□□□□ 0.68
RTN4-204ENST00000357732 SHMT1P34896 483 aa19.27■□□□□ 0.68
RTN4-204ENST00000357732 CASP5P51878 434 aa19.27■□□□□ 0.68
RTN4-204ENST00000357732 CACNB1Q02641 598 aaPredicted RBP19.27■□□□□ 0.68
RTN4-204ENST00000357732 SLC15A2Q16348 729 aa19.27■□□□□ 0.68
RTN4-204ENST00000357732 DAAM2Q86T65 1068 aa19.27■□□□□ 0.68
RTN4-204ENST00000357732 GCNT4Q9P109 453 aa19.27■□□□□ 0.68
RTN4-204ENST00000357732 LY75O60449 1722 aa19.27■□□□□ 0.68
RTN4-204ENST00000357732 TMEM253P0C7T8 217 aa19.27■□□□□ 0.67
RTN4-204ENST00000357732 HPDP32754 393 aaPredicted RBP19.27■□□□□ 0.67
RTN4-204ENST00000357732 HOXD13P35453 343 aa19.27■□□□□ 0.67
RTN4-204ENST00000357732 SLC16A2P36021 539 aa19.27■□□□□ 0.67
RTN4-204ENST00000357732 SLC30A5Q8TAD4 765 aa19.27■□□□□ 0.67
RTN4-204ENST00000357732 RFFLQ8WZ73 363 aa19.27■□□□□ 0.67
RTN4-204ENST00000357732 CENPTQ96BT3 561 aa19.27■□□□□ 0.67
RTN4-204ENST00000357732 UIMC1Q96RL1 719 aa19.27■□□□□ 0.67
RTN4-204ENST00000357732 DDX47Q9H0S4 455 aaKnown RBP19.27■□□□□ 0.67
RTN4-204ENST00000357732 CARD9Q9H257 536 aa19.27■□□□□ 0.67
RTN4-204ENST00000357732 PCDHA1Q9Y5I3 950 aa19.27■□□□□ 0.67
RTN4-204ENST00000357732 LRRC37AA6NMS7 1700 aa19.26■□□□□ 0.67
RTN4-204ENST00000357732 LTBP1Q14766 1721 aa19.26■□□□□ 0.67
RTN4-204ENST00000357732 ASTN1O14525 1302 aa19.26■□□□□ 0.67
RTN4-204ENST00000357732 GOLGA6L7A0A1B0GV03 622 aa19.26■□□□□ 0.67
RTN4-204ENST00000357732 DDX3XO00571 662 aaKnown RBP eCLIP19.26■□□□□ 0.672e-35■□□□□ 10.1
RTN4-204ENST00000357732 TRIM37O94972 964 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms