RNA–Protein interactions for RNA: ENST00000356948.10

PTBP1-203, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTBP1, Length 3,598 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-203ENST00000356948 RNPC3Q96LT9 517 aaKnown RBP16.68■□□□□ 0.26
PTBP1-203ENST00000356948 JPH2Q9BR39 696 aaPredicted RBP16.68■□□□□ 0.26
PTBP1-203ENST00000356948 TRIM31Q9BZY9 425 aa16.68■□□□□ 0.26
PTBP1-203ENST00000356948 hCG_1984214I3L0E3 225 aa16.67■□□□□ 0.26
PTBP1-203ENST00000356948 DDX39AO00148 427 aaKnown RBP16.67■□□□□ 0.26
PTBP1-203ENST00000356948 EBAG9O00559 213 aa16.67■□□□□ 0.26
PTBP1-203ENST00000356948 CFBP00751 764 aa16.67■□□□□ 0.26
PTBP1-203ENST00000356948 ALKBH5Q6P6C2 394 aaKnown RBP16.67■□□□□ 0.26
PTBP1-203ENST00000356948 ZNF713Q8N859 430 aaPredicted RBP16.67■□□□□ 0.26
PTBP1-203ENST00000356948 CRAMP1Q96RY5 1269 aa16.67■□□□□ 0.26
PTBP1-203ENST00000356948 CAPS2Q9BXY5 557 aa16.67■□□□□ 0.26
PTBP1-203ENST00000356948 AIPL1Q9NZN9 384 aa16.67■□□□□ 0.26
PTBP1-203ENST00000356948 DNM3Q9UQ16 869 aa16.67■□□□□ 0.26
PTBP1-203ENST00000356948 PCDHGC5Q9Y5F6 944 aa16.67■□□□□ 0.26
PTBP1-203ENST00000356948 NR3C1P04150 777 aa16.67■□□□□ 0.26
PTBP1-203ENST00000356948 MCM3P25205 808 aa16.67■□□□□ 0.26
PTBP1-203ENST00000356948 EPHB4P54760 987 aa16.67■□□□□ 0.26
PTBP1-203ENST00000356948 IQCEQ6IPM2 695 aa16.67■□□□□ 0.26
PTBP1-203ENST00000356948 SLC35C1Q96A29 364 aa16.67■□□□□ 0.26
PTBP1-203ENST00000356948 CEP63Q96MT8 703 aa16.67■□□□□ 0.26
PTBP1-203ENST00000356948 SH3GL2Q99962 352 aa16.67■□□□□ 0.26
PTBP1-203ENST00000356948 EIF2AK1Q9BQI3 630 aaKnown RBP16.67■□□□□ 0.26
PTBP1-203ENST00000356948 ACP6Q9NPH0 428 aa16.67■□□□□ 0.26
PTBP1-203ENST00000356948 GCNT4Q9P109 453 aa16.67■□□□□ 0.26
PTBP1-203ENST00000356948 DDX3XO00571 662 aaKnown RBP eCLIP16.67■□□□□ 0.265e-19■■■■□ 22.3
PTBP1-203ENST00000356948 KIAA0754O94854 1291 aa16.67■□□□□ 0.26
PTBP1-203ENST00000356948 ORC2Q13416 577 aaPredicted RBP16.67■□□□□ 0.26
PTBP1-203ENST00000356948 UBAP2Q5T6F2 1119 aaKnown RBP16.67■□□□□ 0.26
PTBP1-203ENST00000356948 CCDC70Q6NSX1 233 aa16.67■□□□□ 0.26
PTBP1-203ENST00000356948 GLYCTKQ8IVS8 523 aa16.67■□□□□ 0.26
PTBP1-203ENST00000356948 METTL13Q8N6R0 699 aa16.67■□□□□ 0.26
PTBP1-203ENST00000356948 GDF3Q9NR23 364 aa16.67■□□□□ 0.26
PTBP1-203ENST00000356948 AMACRQ9UHK6 382 aa16.67■□□□□ 0.26
PTBP1-203ENST00000356948 VAV3Q9UKW4 847 aa16.67■□□□□ 0.26
PTBP1-203ENST00000356948 ABCB11O95342 1321 aa16.67■□□□□ 0.26
PTBP1-203ENST00000356948 ECHS1P30084 290 aa16.66■□□□□ 0.26
PTBP1-203ENST00000356948 HLTFQ14527 1009 aaKnown RBP eCLIP16.66■□□□□ 0.26
PTBP1-203ENST00000356948 EPHA7Q15375 998 aa16.66■□□□□ 0.26
PTBP1-203ENST00000356948 CBWD6Q4V339 395 aa16.66■□□□□ 0.26
PTBP1-203ENST00000356948 CBWD3Q5JTY5 395 aa16.66■□□□□ 0.26
PTBP1-203ENST00000356948 CBWD5Q5RIA9 395 aa16.66■□□□□ 0.26
PTBP1-203ENST00000356948 U2AF1L4Q8WU68 220 aaKnown RBP16.66■□□□□ 0.26
PTBP1-203ENST00000356948 FAM84AQ96KN4 292 aa16.66■□□□□ 0.26
PTBP1-203ENST00000356948 RUFY1Q96T51 708 aa16.66■□□□□ 0.26
PTBP1-203ENST00000356948 TMEM150BA6NC51 233 aa16.66■□□□□ 0.26
PTBP1-203ENST00000356948 PPFIA4O75335 1185 aa16.66■□□□□ 0.26
PTBP1-203ENST00000356948 RPS6KA5O75582 802 aa16.66■□□□□ 0.26
PTBP1-203ENST00000356948 XRCC5P13010 732 aaKnown RBP16.66■□□□□ 0.26
PTBP1-203ENST00000356948 HPDP32754 393 aaPredicted RBP16.66■□□□□ 0.26
PTBP1-203ENST00000356948 CYP2J2P51589 502 aa16.66■□□□□ 0.26
PTBP1-203ENST00000356948 MEX3CQ5U5Q3 659 aaKnown RBP16.66■□□□□ 0.26
PTBP1-203ENST00000356948 SYT2Q8N9I0 419 aaPredicted RBP16.66■□□□□ 0.26
PTBP1-203ENST00000356948 USP38Q8NB14 1042 aa16.66■□□□□ 0.26
PTBP1-203ENST00000356948 DYDC2Q96IM9 177 aa16.66■□□□□ 0.26
PTBP1-203ENST00000356948 SWAP70Q9UH65 585 aa16.66■□□□□ 0.26
PTBP1-203ENST00000356948 DCDC2CA8MYV0 355 aa16.66■□□□□ 0.26
PTBP1-203ENST00000356948 AFPP02771 609 aaKnown RBP16.66■□□□□ 0.26
PTBP1-203ENST00000356948 COL23A1Q86Y22 540 aaPredicted RBP16.66■□□□□ 0.26
PTBP1-203ENST00000356948 CPNE8Q86YQ8 564 aa16.66■□□□□ 0.26
PTBP1-203ENST00000356948 IQCKQ8N0W5 287 aa16.66■□□□□ 0.26
PTBP1-203ENST00000356948 RNF10Q8N5U6 811 aaKnown RBP16.66■□□□□ 0.26
PTBP1-203ENST00000356948 OLIG1Q8TAK6 271 aa16.66■□□□□ 0.26
PTBP1-203ENST00000356948 CLRN2A0PK11 232 aa16.65■□□□□ 0.26
PTBP1-203ENST00000356948 SPDYE3A6NKU9 549 aa16.65■□□□□ 0.26
PTBP1-203ENST00000356948 ZNF76P36508 570 aa16.65■□□□□ 0.26
PTBP1-203ENST00000356948 ZNF211Q13398 564 aaPredicted RBP16.65■□□□□ 0.26
PTBP1-203ENST00000356948 DGKZQ13574 1117 aa16.65■□□□□ 0.26
PTBP1-203ENST00000356948 EPM2AIP1Q7L775 607 aaPredicted RBP16.65■□□□□ 0.26
PTBP1-203ENST00000356948 FBXO11Q86XK2 927 aa16.65■□□□□ 0.26
PTBP1-203ENST00000356948 LNX1Q8TBB1 728 aaPredicted RBP16.65■□□□□ 0.26
PTBP1-203ENST00000356948 PRMT6Q96LA8 375 aaPredicted RBP16.65■□□□□ 0.26
PTBP1-203ENST00000356948 KDM3AQ9Y4C1 1321 aa16.65■□□□□ 0.26
PTBP1-203ENST00000356948 CENPFP49454 3210 aa16.65■□□□□ 0.26
PTBP1-203ENST00000356948 GCFC2P16383 781 aaKnown RBP16.65■□□□□ 0.26
PTBP1-203ENST00000356948 RPA1P27694 616 aa16.65■□□□□ 0.26
PTBP1-203ENST00000356948 CHRNA5P30532 468 aa16.65■□□□□ 0.26
PTBP1-203ENST00000356948 RINT1Q6NUQ1 792 aa16.65■□□□□ 0.26
PTBP1-203ENST00000356948 PPP1R18Q6NYC8 613 aa16.65■□□□□ 0.26
PTBP1-203ENST00000356948 LRRC57Q8N9N7 239 aa16.65■□□□□ 0.26
PTBP1-203ENST00000356948 FOCADQ5VW36 1801 aa16.65■□□□□ 0.26
PTBP1-203ENST00000356948 HSF2BPO75031 334 aa16.64■□□□□ 0.26
PTBP1-203ENST00000356948 USP11P51784 963 aa16.64■□□□□ 0.26
PTBP1-203ENST00000356948 RPS6KA1Q15418 735 aa16.64■□□□□ 0.26
PTBP1-203ENST00000356948 MYCT1Q8N699 235 aa16.64■□□□□ 0.26
PTBP1-203ENST00000356948 AMNQ9BXJ7 453 aa16.64■□□□□ 0.26
PTBP1-203ENST00000356948 GLIS2Q9BZE0 524 aaPredicted RBP16.64■□□□□ 0.26
PTBP1-203ENST00000356948 AFF2P51816 1311 aa16.64■□□□□ 0.26
PTBP1-203ENST00000356948 ZMYM2Q9UBW7 1377 aa16.64■□□□□ 0.26
PTBP1-203ENST00000356948 SHOX2O60902 331 aaPredicted RBP16.64■□□□□ 0.25
PTBP1-203ENST00000356948 KIF4AO95239 1232 aa16.64■□□□□ 0.25
PTBP1-203ENST00000356948 MARSP56192 900 aaKnown RBP16.64■□□□□ 0.25
PTBP1-203ENST00000356948 ARHGAP44Q17R89 818 aa16.64■□□□□ 0.25
PTBP1-203ENST00000356948 LRRC27Q9C0I9 530 aa16.64■□□□□ 0.25
PTBP1-203ENST00000356948 FBXO28Q9NVF7 368 aa16.64■□□□□ 0.25
PTBP1-203ENST00000356948 SCN9AQ15858 1988 aa16.64■□□□□ 0.25
PTBP1-203ENST00000356948 LY75O60449 1722 aa16.64■□□□□ 0.25
PTBP1-203ENST00000356948 SHTN1A0MZ66 631 aa16.64■□□□□ 0.25
PTBP1-203ENST00000356948 SLITRK3O94933 977 aa16.64■□□□□ 0.25
PTBP1-203ENST00000356948 MMP10P09238 476 aa16.64■□□□□ 0.25
PTBP1-203ENST00000356948 DLG4P78352 724 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms