RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 A0A087X0T9 212 aa24.39■■□□□ 1.5
NKX2-1-201ENST00000354822 SHTN1A0MZ66 631 aa24.39■■□□□ 1.5
NKX2-1-201ENST00000354822 LRRIQ3A6PVS8 624 aaPredicted RBP24.39■■□□□ 1.5
NKX2-1-201ENST00000354822 FAM228BP0C875 321 aa24.39■■□□□ 1.5
NKX2-1-201ENST00000354822 KIAA0753Q2KHM9 967 aa24.39■■□□□ 1.5
NKX2-1-201ENST00000354822 CFAP221Q4G0U5 840 aa24.39■■□□□ 1.5
NKX2-1-201ENST00000354822 AGBL3Q8NEM8 1001 aa24.39■■□□□ 1.5
NKX2-1-201ENST00000354822 ZNF577Q9BSK1 485 aa24.39■■□□□ 1.5
NKX2-1-201ENST00000354822 ODF2LQ9ULJ1 636 aa24.39■■□□□ 1.5
NKX2-1-201ENST00000354822 PSMC2P35998 433 aaKnown RBP24.39■■□□□ 1.49
NKX2-1-201ENST00000354822 CAP2P40123 477 aa24.39■■□□□ 1.49
NKX2-1-201ENST00000354822 APBA1Q02410 837 aa24.39■■□□□ 1.49
NKX2-1-201ENST00000354822 ARID5AQ03989 594 aa24.39■■□□□ 1.49
NKX2-1-201ENST00000354822 TAF3Q5VWG9 929 aa24.39■■□□□ 1.49
NKX2-1-201ENST00000354822 MKNK1Q9BUB5 465 aa24.39■■□□□ 1.49
NKX2-1-201ENST00000354822 PCDHGC5Q9Y5F6 944 aa24.39■■□□□ 1.49
NKX2-1-201ENST00000354822 TGFB1I1O43294 461 aa24.38■■□□□ 1.49
NKX2-1-201ENST00000354822 PRKCIP41743 596 aa24.38■■□□□ 1.49
NKX2-1-201ENST00000354822 AARSP49588 968 aaKnown RBP eCLIP24.38■■□□□ 1.49
NKX2-1-201ENST00000354822 GLE1Q53GS7 698 aaKnown RBP24.38■■□□□ 1.49
NKX2-1-201ENST00000354822 DCAF17Q5H9S7 520 aaPredicted RBP24.38■■□□□ 1.49
NKX2-1-201ENST00000354822 SLC35C1Q96A29 364 aa24.38■■□□□ 1.49
NKX2-1-201ENST00000354822 TEKT3Q9BXF9 490 aa24.38■■□□□ 1.49
NKX2-1-201ENST00000354822 VEZTQ9HBM0 779 aa24.38■■□□□ 1.49
NKX2-1-201ENST00000354822 CHMP2AO43633 222 aa24.37■■□□□ 1.49
NKX2-1-201ENST00000354822 ACTN1P12814 892 aa24.37■■□□□ 1.49
NKX2-1-201ENST00000354822 ZNF131P52739 623 aa24.37■■□□□ 1.49
NKX2-1-201ENST00000354822 TCERG1LQ5VWI1 586 aa24.37■■□□□ 1.49
NKX2-1-201ENST00000354822 LDHDQ86WU2 507 aa24.37■■□□□ 1.49
NKX2-1-201ENST00000354822 CCDC102AQ96A19 550 aa24.37■■□□□ 1.49
NKX2-1-201ENST00000354822 RIT2Q99578 217 aa24.37■■□□□ 1.49
NKX2-1-201ENST00000354822 KLRC1P26715 233 aa24.37■■□□□ 1.49
NKX2-1-201ENST00000354822 TNNT3P45378 269 aaPredicted RBP24.37■■□□□ 1.49
NKX2-1-201ENST00000354822 IFI16Q16666 785 aaKnown RBP24.37■■□□□ 1.49
NKX2-1-201ENST00000354822 NEK9Q8TD19 979 aa24.37■■□□□ 1.49
NKX2-1-201ENST00000354822 ATP8B3O60423 1300 aa24.37■■□□□ 1.49
NKX2-1-201ENST00000354822 FRMPD4Q14CM0 1322 aa24.37■■□□□ 1.49
NKX2-1-201ENST00000354822 SMCHD1A6NHR9 2005 aa24.37■■□□□ 1.49
NKX2-1-201ENST00000354822 SFI1A8K8P3 1242 aa24.36■■□□□ 1.49
NKX2-1-201ENST00000354822 PALMO75781 387 aa24.36■■□□□ 1.49
NKX2-1-201ENST00000354822 ASNSP08243 561 aa24.36■■□□□ 1.49
NKX2-1-201ENST00000354822 PTK2Q05397 1052 aa24.36■■□□□ 1.49
NKX2-1-201ENST00000354822 ZNF720Q7Z2F6 126 aa24.36■■□□□ 1.49
NKX2-1-201ENST00000354822 BORCS6Q96GS4 357 aa24.36■■□□□ 1.49
NKX2-1-201ENST00000354822 PIM2Q9P1W9 311 aa24.36■■□□□ 1.49
NKX2-1-201ENST00000354822 PCDHB13Q9Y5F0 798 aa24.36■■□□□ 1.49
NKX2-1-201ENST00000354822 A0A0U1RQG5 324 aaPredicted RBP24.36■■□□□ 1.49
NKX2-1-201ENST00000354822 CLIC2O15247 247 aa24.36■■□□□ 1.49
NKX2-1-201ENST00000354822 CASP4P49662 377 aa24.36■■□□□ 1.49
NKX2-1-201ENST00000354822 MAP3K10Q02779 954 aa24.36■■□□□ 1.49
NKX2-1-201ENST00000354822 B3GNT9Q6UX72 402 aa24.36■■□□□ 1.49
NKX2-1-201ENST00000354822 HS2ST1Q7LGA3 356 aa24.36■■□□□ 1.49
NKX2-1-201ENST00000354822 VPS36Q86VN1 386 aa24.36■■□□□ 1.49
NKX2-1-201ENST00000354822 VPS18Q9P253 973 aa24.36■■□□□ 1.49
NKX2-1-201ENST00000354822 NCK2O43639 380 aa24.35■■□□□ 1.49
NKX2-1-201ENST00000354822 CXCR5P32302 372 aa24.35■■□□□ 1.49
NKX2-1-201ENST00000354822 TGFB2P61812 414 aa24.35■■□□□ 1.49
NKX2-1-201ENST00000354822 MEI1Q5TIA1 1274 aa24.35■■□□□ 1.49
NKX2-1-201ENST00000354822 FAM186BQ8IYM0 893 aa24.35■■□□□ 1.49
NKX2-1-201ENST00000354822 GOLGA5Q8TBA6 731 aa24.35■■□□□ 1.49
NKX2-1-201ENST00000354822 MXRA8Q9BRK3 442 aa24.35■■□□□ 1.49
NKX2-1-201ENST00000354822 LRRC1Q9BTT6 524 aa24.35■■□□□ 1.49
NKX2-1-201ENST00000354822 UNC45AQ9H3U1 944 aa24.35■■□□□ 1.49
NKX2-1-201ENST00000354822 GRID2IPA4D2P6 1211 aa24.35■■□□□ 1.49
NKX2-1-201ENST00000354822 FLOT1O75955 427 aa24.35■■□□□ 1.49
NKX2-1-201ENST00000354822 BCRP11274 1271 aa24.35■■□□□ 1.49
NKX2-1-201ENST00000354822 GUCY2CP25092 1073 aa24.35■■□□□ 1.49
NKX2-1-201ENST00000354822 NMT1P30419 496 aaKnown RBP24.35■■□□□ 1.49
NKX2-1-201ENST00000354822 KCNA1Q09470 495 aa24.35■■□□□ 1.49
NKX2-1-201ENST00000354822 ZNF571Q7Z3V5 609 aaPredicted RBP24.35■■□□□ 1.49
NKX2-1-201ENST00000354822 FAM178BQ8IXR5 827 aa24.35■■□□□ 1.49
NKX2-1-201ENST00000354822 TMEM39BQ9GZU3 492 aa24.35■■□□□ 1.49
NKX2-1-201ENST00000354822 HPCAL4Q9UM19 191 aa24.35■■□□□ 1.49
NKX2-1-201ENST00000354822 IPO5O00410 1097 aaKnown RBP24.34■■□□□ 1.49
NKX2-1-201ENST00000354822 ARP10275 920 aa24.34■■□□□ 1.49
NKX2-1-201ENST00000354822 PTGER2P43116 358 aa24.34■■□□□ 1.49
NKX2-1-201ENST00000354822 HSD17B4P51659 736 aa24.34■■□□□ 1.49
NKX2-1-201ENST00000354822 GCNT4Q9P109 453 aa24.34■■□□□ 1.49
NKX2-1-201ENST00000354822 ZMYND10O75800 440 aa24.33■■□□□ 1.49
NKX2-1-201ENST00000354822 ICAM1P05362 532 aa24.33■■□□□ 1.49
NKX2-1-201ENST00000354822 JAM2P57087 298 aa24.33■■□□□ 1.49
NKX2-1-201ENST00000354822 UBXN2AP68543 259 aa24.33■■□□□ 1.49
NKX2-1-201ENST00000354822 ZYXQ15942 572 aaKnown RBP24.33■■□□□ 1.49
NKX2-1-201ENST00000354822 ENOX2Q16206 610 aaKnown RBP24.33■■□□□ 1.49
NKX2-1-201ENST00000354822 MIGA2Q7L4E1 593 aa24.33■■□□□ 1.49
NKX2-1-201ENST00000354822 FMNL3Q8IVF7 1028 aa24.33■■□□□ 1.49
NKX2-1-201ENST00000354822 PSMB7Q99436 277 aa24.33■■□□□ 1.49
NKX2-1-201ENST00000354822 POLD4Q9HCU8 107 aa24.33■■□□□ 1.49
NKX2-1-201ENST00000354822 DAAM1Q9Y4D1 1078 aa24.33■■□□□ 1.49
NKX2-1-201ENST00000354822 ZMYM2Q9UBW7 1377 aa24.33■■□□□ 1.49
NKX2-1-201ENST00000354822 ERICH4A6NGS2 130 aa24.33■■□□□ 1.48
NKX2-1-201ENST00000354822 CES2O00748 559 aa24.33■■□□□ 1.48
NKX2-1-201ENST00000354822 N4BP1O75113 896 aaKnown RBP24.33■■□□□ 1.48
NKX2-1-201ENST00000354822 CXCL9Q07325 125 aa24.33■■□□□ 1.48
NKX2-1-201ENST00000354822 TNIP1Q15025 636 aa24.33■■□□□ 1.48
NKX2-1-201ENST00000354822 NIPA1Q7RTP0 329 aa24.33■■□□□ 1.48
NKX2-1-201ENST00000354822 AENQ8WTP8 325 aaKnown RBP24.33■■□□□ 1.48
NKX2-1-201ENST00000354822 ZBED3Q96IU2 234 aaPredicted RBP24.33■■□□□ 1.48
NKX2-1-201ENST00000354822 FIZ1Q96SL8 496 aa24.33■■□□□ 1.48
NKX2-1-201ENST00000354822 SELENOOQ9BVL4 669 aa24.33■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms