RNA–Protein interactions for RNA: ENST00000347662.8

TRAF3-201, Transcript of TNF receptor associated factor 3, humanhuman

TSL 5 BASIC

Gene TRAF3, Length 7,700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-201ENST00000347662 EEF2KMTQ96G04 330 aa12.66□□□□□ -0.38
TRAF3-201ENST00000347662 CCDC17Q96LX7 622 aa12.66□□□□□ -0.38
TRAF3-201ENST00000347662 CALN1Q9BXU9 219 aa12.66□□□□□ -0.38
TRAF3-201ENST00000347662 INO80BQ9C086 356 aaPredicted RBP12.66□□□□□ -0.38
TRAF3-201ENST00000347662 TRAF3IP3Q9Y228 551 aa12.66□□□□□ -0.38
TRAF3-201ENST00000347662 MOCS3O95396 460 aa12.66□□□□□ -0.38
TRAF3-201ENST00000347662 NNMTP40261 264 aa12.66□□□□□ -0.38
TRAF3-201ENST00000347662 CYP4F22Q6NT55 531 aa12.66□□□□□ -0.38
TRAF3-201ENST00000347662 SIX6OS1Q8N1H7 587 aa12.66□□□□□ -0.38
TRAF3-201ENST00000347662 RETREG2Q8NC44 543 aa12.66□□□□□ -0.38
TRAF3-201ENST00000347662 ZNF341Q9BYN7 854 aa12.66□□□□□ -0.38
TRAF3-201ENST00000347662 TDRD3Q9H7E2 651 aaKnown RBP12.66□□□□□ -0.38
TRAF3-201ENST00000347662 COPRSQ9NQ92 184 aa12.66□□□□□ -0.38
TRAF3-201ENST00000347662 EFCAB8A8MWE9 144 aa12.66□□□□□ -0.38
TRAF3-201ENST00000347662 PI4K2BG5E9Z4 385 aa12.66□□□□□ -0.38
TRAF3-201ENST00000347662 TTC23LQ6PF05 361 aa12.66□□□□□ -0.38
TRAF3-201ENST00000347662 ANKS3Q6ZW76 656 aa12.66□□□□□ -0.38
TRAF3-201ENST00000347662 YAF2Q8IY57 180 aa12.66□□□□□ -0.38
TRAF3-201ENST00000347662 ULK4Q96C45 1275 aa12.66□□□□□ -0.38
TRAF3-201ENST00000347662 CAPS2Q9BXY5 557 aa12.66□□□□□ -0.38
TRAF3-201ENST00000347662 PI4KBQ9UBF8 816 aa12.66□□□□□ -0.38
TRAF3-201ENST00000347662 DNAJC6O75061 913 aa12.66□□□□□ -0.38
TRAF3-201ENST00000347662 TCP11X2Q5H9J9 407 aa12.66□□□□□ -0.38
TRAF3-201ENST00000347662 PAMP19021 973 aa12.65□□□□□ -0.38
TRAF3-201ENST00000347662 CHRNA5P30532 468 aa12.65□□□□□ -0.38
TRAF3-201ENST00000347662 OSTNP61366 133 aa12.65□□□□□ -0.38
TRAF3-201ENST00000347662 KRT17Q04695 432 aa12.65□□□□□ -0.38
TRAF3-201ENST00000347662 CEP78Q5JTW2 689 aa12.65□□□□□ -0.38
TRAF3-201ENST00000347662 SRRM1Q8IYB3 904 aaKnown RBP12.65□□□□□ -0.38
TRAF3-201ENST00000347662 TRMT44Q8IYL2 757 aaKnown RBP12.65□□□□□ -0.38
TRAF3-201ENST00000347662 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.65□□□□□ -0.38
TRAF3-201ENST00000347662 ASPSCR1Q9BZE9 553 aa12.65□□□□□ -0.38
TRAF3-201ENST00000347662 E5RI56 91 aa12.65□□□□□ -0.38
TRAF3-201ENST00000347662 FAM133BQ5BKY9 247 aaKnown RBP12.65□□□□□ -0.38
TRAF3-201ENST00000347662 PPP6R3Q5H9R7 873 aaPredicted RBP12.65□□□□□ -0.38
TRAF3-201ENST00000347662 USP17L2Q6R6M4 530 aa12.65□□□□□ -0.38
TRAF3-201ENST00000347662 DYRK4Q9NR20 520 aa12.65□□□□□ -0.38
TRAF3-201ENST00000347662 STAT2P52630 851 aa12.65□□□□□ -0.38
TRAF3-201ENST00000347662 ADKP55263 362 aaKnown RBP12.65□□□□□ -0.38
TRAF3-201ENST00000347662 PTK2Q05397 1052 aa12.65□□□□□ -0.38
TRAF3-201ENST00000347662 E2F5Q15329 346 aa12.65□□□□□ -0.38
TRAF3-201ENST00000347662 ODR4Q5SWX8 454 aa12.65□□□□□ -0.38
TRAF3-201ENST00000347662 PLEKHF1Q96S99 279 aa12.65□□□□□ -0.38
TRAF3-201ENST00000347662 EIF3CQ99613 913 aaKnown RBP12.65□□□□□ -0.38
TRAF3-201ENST00000347662 DMC1Q14565 340 aa12.65□□□□□ -0.38
TRAF3-201ENST00000347662 RASGRP4Q8TDF6 673 aa12.65□□□□□ -0.38
TRAF3-201ENST00000347662 HSPH1Q92598 858 aa12.65□□□□□ -0.38
TRAF3-201ENST00000347662 NT5C3AQ9H0P0 336 aa12.65□□□□□ -0.38
TRAF3-201ENST00000347662 ABCC4O15439 1325 aa12.65□□□□□ -0.38
TRAF3-201ENST00000347662 A0A0G2JLW4 131 aa12.65□□□□□ -0.38
TRAF3-201ENST00000347662 SCG2P13521 617 aa12.65□□□□□ -0.38
TRAF3-201ENST00000347662 POLR2FP61218 127 aaKnown RBP12.65□□□□□ -0.38
TRAF3-201ENST00000347662 CENPKQ9BS16 269 aa12.65□□□□□ -0.38
TRAF3-201ENST00000347662 TEKT3Q9BXF9 490 aa12.65□□□□□ -0.38
TRAF3-201ENST00000347662 AMNQ9BXJ7 453 aa12.65□□□□□ -0.38
TRAF3-201ENST00000347662 ATP6V0A4Q9HBG4 840 aa12.65□□□□□ -0.38
TRAF3-201ENST00000347662 INTS9Q9NV88 658 aaKnown RBP12.65□□□□□ -0.38
TRAF3-201ENST00000347662 FARP1Q9Y4F1 1045 aaPredicted RBP12.65□□□□□ -0.38
TRAF3-201ENST00000347662 TAC1P20366 129 aa12.65□□□□□ -0.39
TRAF3-201ENST00000347662 CCDC142Q17RM4 750 aa12.65□□□□□ -0.39
TRAF3-201ENST00000347662 DSTYKQ6XUX3 929 aa12.65□□□□□ -0.39
TRAF3-201ENST00000347662 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.65□□□□□ -0.39
TRAF3-201ENST00000347662 FAM196BA6NMK8 535 aa12.64□□□□□ -0.39
TRAF3-201ENST00000347662 ATL3Q6DD88 541 aa12.64□□□□□ -0.39
TRAF3-201ENST00000347662 SCG3Q8WXD2 468 aaKnown RBP12.64□□□□□ -0.39
TRAF3-201ENST00000347662 SPON1Q9HCB6 807 aa12.64□□□□□ -0.39
TRAF3-201ENST00000347662 MYL7Q01449 175 aa12.64□□□□□ -0.39
TRAF3-201ENST00000347662 NKX1-1Q15270 411 aaPredicted RBP12.64□□□□□ -0.39
TRAF3-201ENST00000347662 CCDC84Q86UT8 332 aaPredicted RBP12.64□□□□□ -0.39
TRAF3-201ENST00000347662 DHX38Q92620 1227 aaKnown RBP12.64□□□□□ -0.39
TRAF3-201ENST00000347662 CDO1Q16878 200 aa12.64□□□□□ -0.39
TRAF3-201ENST00000347662 HDDC2Q7Z4H3 204 aa12.64□□□□□ -0.39
TRAF3-201ENST00000347662 SMYD3Q9H7B4 428 aa12.64□□□□□ -0.39
TRAF3-201ENST00000347662 YY1AP1Q9H869 796 aa12.64□□□□□ -0.39
TRAF3-201ENST00000347662 ZNF229Q9UJW7 825 aa12.64□□□□□ -0.39
TRAF3-201ENST00000347662 RASGRF2O14827 1237 aa12.64□□□□□ -0.39
TRAF3-201ENST00000347662 BMP3P12645 472 aa12.64□□□□□ -0.39
TRAF3-201ENST00000347662 MARK3P27448 753 aa12.64□□□□□ -0.39
TRAF3-201ENST00000347662 TFAMQ00059 246 aaKnown RBP12.64□□□□□ -0.39
TRAF3-201ENST00000347662 GOLGA8FQ08AF8 430 aa12.64□□□□□ -0.39
TRAF3-201ENST00000347662 NEK8Q86SG6 692 aa12.64□□□□□ -0.39
TRAF3-201ENST00000347662 TCP11Q8WWU5 503 aa12.64□□□□□ -0.39
TRAF3-201ENST00000347662 MTBPQ96DY7 904 aa12.64□□□□□ -0.39
TRAF3-201ENST00000347662 TMEM161AQ9NX61 479 aa12.64□□□□□ -0.39
TRAF3-201ENST00000347662 NDE1Q9NXR1 346 aa12.64□□□□□ -0.39
TRAF3-201ENST00000347662 NXF1Q9UBU9 619 aaKnown RBP12.64□□□□□ -0.39
TRAF3-201ENST00000347662 SHROOM2Q13796 1616 aa12.64□□□□□ -0.39
TRAF3-201ENST00000347662 BTBD18B2RXH4 712 aa12.64□□□□□ -0.39
TRAF3-201ENST00000347662 MAPK4P31152 587 aa12.64□□□□□ -0.39
TRAF3-201ENST00000347662 LCORLQ8N3X6 602 aa12.64□□□□□ -0.39
TRAF3-201ENST00000347662 ARHGAP10A1A4S6 786 aa12.63□□□□□ -0.39
TRAF3-201ENST00000347662 WDR47O94967 919 aa12.63□□□□□ -0.39
TRAF3-201ENST00000347662 KCTD16Q68DU8 428 aa12.63□□□□□ -0.39
TRAF3-201ENST00000347662 MYOCDQ8IZQ8 938 aa12.63□□□□□ -0.39
TRAF3-201ENST00000347662 GTSE1Q9NYZ3 720 aa12.63□□□□□ -0.39
TRAF3-201ENST00000347662 NARFQ9UHQ1 456 aa12.63□□□□□ -0.39
TRAF3-201ENST00000347662 H0YCG3 227 aa12.63□□□□□ -0.39
TRAF3-201ENST00000347662 KANSL2Q9H9L4 492 aa12.63□□□□□ -0.39
TRAF3-201ENST00000347662 ATP11BQ9Y2G3 1177 aa12.63□□□□□ -0.39
TRAF3-201ENST00000347662 AARSP49588 968 aaKnown RBP eCLIP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms