RNA–Protein interactions for RNA: ENST00000344280.7

CCDC38-201, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-201ENST00000344280 SLC5A5Q92911 643 aa23.46■■□□□ 1.35
CCDC38-201ENST00000344280 TMEM39BQ9GZU3 492 aa23.46■■□□□ 1.35
CCDC38-201ENST00000344280 RANBP17Q9H2T7 1088 aaKnown RBP23.46■■□□□ 1.35
CCDC38-201ENST00000344280 GOLPH3Q9H4A6 298 aa23.46■■□□□ 1.35
CCDC38-201ENST00000344280 GOPCQ9HD26 462 aa23.46■■□□□ 1.35
CCDC38-201ENST00000344280 TMOD2Q9NZR1 351 aa23.46■■□□□ 1.35
CCDC38-201ENST00000344280 GRID2IPA4D2P6 1211 aa23.45■■□□□ 1.35
CCDC38-201ENST00000344280 FAM13AO94988 1023 aa23.45■■□□□ 1.35
CCDC38-201ENST00000344280 GGCXP38435 758 aa23.45■■□□□ 1.35
CCDC38-201ENST00000344280 PAFAH1B1P43034 410 aa23.45■■□□□ 1.35
CCDC38-201ENST00000344280 PPP2R5CQ13362 524 aa23.45■■□□□ 1.35
CCDC38-201ENST00000344280 CCDC70Q6NSX1 233 aa23.45■■□□□ 1.35
CCDC38-201ENST00000344280 RSBN1LQ6PCB5 846 aaPredicted RBP23.45■■□□□ 1.35
CCDC38-201ENST00000344280 BORCS6Q96GS4 357 aa23.45■■□□□ 1.35
CCDC38-201ENST00000344280 FIZ1Q96SL8 496 aa23.45■■□□□ 1.35
CCDC38-201ENST00000344280 ACBD3Q9H3P7 528 aa23.45■■□□□ 1.35
CCDC38-201ENST00000344280 PLEKHA4Q9H4M7 779 aa23.45■■□□□ 1.35
CCDC38-201ENST00000344280 SYNPO2Q9UMS6 1093 aa23.45■■□□□ 1.35
CCDC38-201ENST00000344280 EPB41P11171 864 aaKnown RBP23.45■■□□□ 1.34
CCDC38-201ENST00000344280 FAM151AQ8WW52 585 aa23.45■■□□□ 1.34
CCDC38-201ENST00000344280 FAM204AQ9H8W3 233 aa23.45■■□□□ 1.34
CCDC38-201ENST00000344280 VEZTQ9HBM0 779 aa23.45■■□□□ 1.34
CCDC38-201ENST00000344280 TUFT1Q9NNX1 390 aa23.45■■□□□ 1.34
CCDC38-201ENST00000344280 LUC7LQ9NQ29 371 aaKnown RBP23.45■■□□□ 1.34
CCDC38-201ENST00000344280 GCNT4Q9P109 453 aa23.45■■□□□ 1.34
CCDC38-201ENST00000344280 GAS7O60861 476 aa23.44■■□□□ 1.34
CCDC38-201ENST00000344280 RNASE9P60153 205 aaKnown RBP23.44■■□□□ 1.34
CCDC38-201ENST00000344280 CEP55Q53EZ4 464 aa23.44■■□□□ 1.34
CCDC38-201ENST00000344280 MEI1Q5TIA1 1274 aa23.44■■□□□ 1.34
CCDC38-201ENST00000344280 UNC45AQ9H3U1 944 aa23.44■■□□□ 1.34
CCDC38-201ENST00000344280 UTRNP46939 3433 aa23.44■■□□□ 1.34
CCDC38-201ENST00000344280 SLC16A3O15427 465 aaKnown RBP23.44■■□□□ 1.34
CCDC38-201ENST00000344280 RPL13P26373 211 aaKnown RBP23.44■■□□□ 1.34
CCDC38-201ENST00000344280 SND1Q7KZF4 910 aaKnown RBP eCLIP23.44■■□□□ 1.34
CCDC38-201ENST00000344280 STIM2Q9P246 746 aa23.44■■□□□ 1.34
CCDC38-201ENST00000344280 RBBP6Q7Z6E9 1792 aaKnown RBP23.43■■□□□ 1.34
CCDC38-201ENST00000344280 A0A0U1RQG5 324 aaPredicted RBP23.43■■□□□ 1.34
CCDC38-201ENST00000344280 VIL1P09327 827 aaKnown RBP23.43■■□□□ 1.34
CCDC38-201ENST00000344280 PRELPP51888 382 aa23.43■■□□□ 1.34
CCDC38-201ENST00000344280 DLGAP5Q15398 846 aa23.43■■□□□ 1.34
CCDC38-201ENST00000344280 PTPROQ16827 1216 aa23.43■■□□□ 1.34
CCDC38-201ENST00000344280 CFAP221Q4G0U5 840 aa23.43■■□□□ 1.34
CCDC38-201ENST00000344280 METTL14Q9HCE5 456 aaKnown RBP23.43■■□□□ 1.34
CCDC38-201ENST00000344280 SCAF8Q9UPN6 1271 aaKnown RBP23.43■■□□□ 1.34
CCDC38-201ENST00000344280 COL4A5P29400 1685 aa23.43■■□□□ 1.34
CCDC38-201ENST00000344280 GAP43P17677 238 aa23.43■■□□□ 1.34
CCDC38-201ENST00000344280 GBP6Q6ZN66 633 aa23.43■■□□□ 1.34
CCDC38-201ENST00000344280 GMLQ99445 158 aa23.43■■□□□ 1.34
CCDC38-201ENST00000344280 ZNF577Q9BSK1 485 aa23.43■■□□□ 1.34
CCDC38-201ENST00000344280 VCPKMTQ9H867 229 aa23.43■■□□□ 1.34
CCDC38-201ENST00000344280 PARVGQ9HBI0 331 aa23.43■■□□□ 1.34
CCDC38-201ENST00000344280 TSKSQ9UJT2 592 aa23.43■■□□□ 1.34
CCDC38-201ENST00000344280 NAGPAQ9UK23 515 aa23.43■■□□□ 1.34
CCDC38-201ENST00000344280 ZSCAN5CA6NGD5 496 aaPredicted RBP23.42■■□□□ 1.34
CCDC38-201ENST00000344280 JAM2P57087 298 aa23.42■■□□□ 1.34
CCDC38-201ENST00000344280 C8orf74Q6P047 294 aa23.42■■□□□ 1.34
CCDC38-201ENST00000344280 AEBP2Q6ZN18 517 aaPredicted RBP23.42■■□□□ 1.34
CCDC38-201ENST00000344280 SUPT20HQ8NEM7 779 aa23.42■■□□□ 1.34
CCDC38-201ENST00000344280 ZNF277Q9NRM2 450 aaPredicted RBP23.42■■□□□ 1.34
CCDC38-201ENST00000344280 GLI1P08151 1106 aa23.42■■□□□ 1.34
CCDC38-201ENST00000344280 SLC15A2Q16348 729 aa23.42■■□□□ 1.34
CCDC38-201ENST00000344280 LDHDQ86WU2 507 aa23.42■■□□□ 1.34
CCDC38-201ENST00000344280 PDGFDQ9GZP0 370 aaPredicted RBP23.42■■□□□ 1.34
CCDC38-201ENST00000344280 SHTN1A0MZ66 631 aa23.41■■□□□ 1.34
CCDC38-201ENST00000344280 DDX39AO00148 427 aaKnown RBP23.41■■□□□ 1.34
CCDC38-201ENST00000344280 EIF3DO15371 548 aaKnown RBP eCLIP23.41■■□□□ 1.34
CCDC38-201ENST00000344280 CAPN2P17655 700 aa23.41■■□□□ 1.34
CCDC38-201ENST00000344280 ZSCAN26Q16670 478 aa23.41■■□□□ 1.34
CCDC38-201ENST00000344280 SPDYE2Q495Y8 402 aa23.41■■□□□ 1.34
CCDC38-201ENST00000344280 ALKBH5Q6P6C2 394 aaKnown RBP23.41■■□□□ 1.34
CCDC38-201ENST00000344280 ZNF720Q7Z2F6 126 aa23.41■■□□□ 1.34
CCDC38-201ENST00000344280 FAM186BQ8IYM0 893 aa23.41■■□□□ 1.34
CCDC38-201ENST00000344280 BANK1Q8NDB2 785 aa23.41■■□□□ 1.34
CCDC38-201ENST00000344280 CHURC1Q8WUH1 139 aa23.41■■□□□ 1.34
CCDC38-201ENST00000344280 FRMPD4Q14CM0 1322 aa23.41■■□□□ 1.34
CCDC38-201ENST00000344280 AGBL1Q96MI9 1066 aa23.4■■□□□ 1.34
CCDC38-201ENST00000344280 INPP4AQ96PE3 977 aaPredicted RBP23.4■■□□□ 1.34
CCDC38-201ENST00000344280 PKD2L1Q9P0L9 805 aa23.4■■□□□ 1.34
CCDC38-201ENST00000344280 CALCOCO1Q9P1Z2 691 aa23.4■■□□□ 1.34
CCDC38-201ENST00000344280 MRPL11Q9Y3B7 192 aaKnown RBP23.4■■□□□ 1.34
CCDC38-201ENST00000344280 ESYT3A0FGR9 886 aa23.4■■□□□ 1.34
CCDC38-201ENST00000344280 PRKCIP41743 596 aa23.4■■□□□ 1.34
CCDC38-201ENST00000344280 LXNQ9BS40 222 aa23.4■■□□□ 1.34
CCDC38-201ENST00000344280 PSMC2P35998 433 aaKnown RBP23.39■■□□□ 1.34
CCDC38-201ENST00000344280 B3GNT9Q6UX72 402 aa23.39■■□□□ 1.34
CCDC38-201ENST00000344280 TSEN2Q8NCE0 465 aaKnown RBP23.39■■□□□ 1.34
CCDC38-201ENST00000344280 BZW2Q9Y6E2 419 aaKnown RBP23.39■■□□□ 1.34
CCDC38-201ENST00000344280 KIF13BQ9NQT8 1826 aa23.39■■□□□ 1.34
CCDC38-201ENST00000344280 ITGB5P18084 799 aa23.39■■□□□ 1.33
CCDC38-201ENST00000344280 CYP2J2P51589 502 aa23.39■■□□□ 1.33
CCDC38-201ENST00000344280 ZNF131P52739 623 aa23.39■■□□□ 1.33
CCDC38-201ENST00000344280 FAM178BQ8IXR5 827 aa23.39■■□□□ 1.33
CCDC38-201ENST00000344280 LARGE2Q8N3Y3 721 aa23.39■■□□□ 1.33
CCDC38-201ENST00000344280 OGFOD1Q8N543 542 aa23.39■■□□□ 1.33
CCDC38-201ENST00000344280 KCTD17Q8N5Z5 321 aa23.39■■□□□ 1.33
CCDC38-201ENST00000344280 COL20A1Q9P218 1284 aa23.39■■□□□ 1.33
CCDC38-201ENST00000344280 FBXL5Q9UKA1 691 aa23.39■■□□□ 1.33
CCDC38-201ENST00000344280 NENFQ9UMX5 172 aa23.39■■□□□ 1.33
CCDC38-201ENST00000344280 FAM170AA1A519 330 aa23.38■■□□□ 1.33
CCDC38-201ENST00000344280 GOLGA6BA6NDN3 693 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms