RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 PRDX5P30044 214 aa16.14■□□□□ 0.17
CLCN1-201ENST00000343257 MMP13P45452 471 aa16.14■□□□□ 0.17
CLCN1-201ENST00000343257 MECOMQ03112 1051 aa16.14■□□□□ 0.17
CLCN1-201ENST00000343257 ZNF268Q14587 947 aaPredicted RBP16.14■□□□□ 0.17
CLCN1-201ENST00000343257 ITIH4Q14624 930 aa16.14■□□□□ 0.17
CLCN1-201ENST00000343257 ARMC3Q5W041 872 aa16.14■□□□□ 0.17
CLCN1-201ENST00000343257 IRF2BP2Q7Z5L9 587 aa16.14■□□□□ 0.17
CLCN1-201ENST00000343257 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.14■□□□□ 0.17
CLCN1-201ENST00000343257 NUCKS1Q9H1E3 243 aaKnown RBP16.14■□□□□ 0.17
CLCN1-201ENST00000343257 PPP1R9AQ9ULJ8 1098 aa16.14■□□□□ 0.17
CLCN1-201ENST00000343257 PTPN22Q9Y2R2 807 aa16.14■□□□□ 0.17
CLCN1-201ENST00000343257 AFF2P51816 1311 aa16.13■□□□□ 0.17
CLCN1-201ENST00000343257 CFAP73A6NFT4 308 aa16.13■□□□□ 0.17
CLCN1-201ENST00000343257 CCDC188H7C350 402 aa16.13■□□□□ 0.17
CLCN1-201ENST00000343257 PPFIA2O75334 1257 aa16.13■□□□□ 0.17
CLCN1-201ENST00000343257 GFPT2O94808 682 aa16.13■□□□□ 0.17
CLCN1-201ENST00000343257 H2AFZP0C0S5 128 aa16.13■□□□□ 0.17
CLCN1-201ENST00000343257 LINGO3P0C6S8 592 aa16.13■□□□□ 0.17
CLCN1-201ENST00000343257 TNIP1Q15025 636 aa16.13■□□□□ 0.17
CLCN1-201ENST00000343257 LONRF1Q17RB8 773 aa16.13■□□□□ 0.17
CLCN1-201ENST00000343257 SEPT14Q6ZU15 432 aa16.13■□□□□ 0.17
CLCN1-201ENST00000343257 H2AFVQ71UI9 128 aa16.13■□□□□ 0.17
CLCN1-201ENST00000343257 RAD54LQ92698 747 aa16.13■□□□□ 0.17
CLCN1-201ENST00000343257 SH3GL3Q99963 347 aa16.13■□□□□ 0.17
CLCN1-201ENST00000343257 AMFRQ9UKV5 643 aa16.13■□□□□ 0.17
CLCN1-201ENST00000343257 KCPQ6ZWJ8 1503 aa16.13■□□□□ 0.17
CLCN1-201ENST00000343257 PHRF1Q9P1Y6 1649 aaKnown RBP16.13■□□□□ 0.17
CLCN1-201ENST00000343257 E9PMD0 336 aa16.13■□□□□ 0.17
CLCN1-201ENST00000343257 LAD1O00515 517 aa16.13■□□□□ 0.17
CLCN1-201ENST00000343257 GSTA1P08263 222 aa16.13■□□□□ 0.17
CLCN1-201ENST00000343257 TSPY3P0CV98 308 aa16.13■□□□□ 0.17
CLCN1-201ENST00000343257 TSPY8P0CW00 308 aa16.13■□□□□ 0.17
CLCN1-201ENST00000343257 PLCG2P16885 1265 aa16.13■□□□□ 0.17
CLCN1-201ENST00000343257 MSH2P43246 934 aa16.13■□□□□ 0.17
CLCN1-201ENST00000343257 RBM46Q8TBY0 533 aaKnown RBP16.13■□□□□ 0.17
CLCN1-201ENST00000343257 C18orf8Q96DM3 657 aa16.13■□□□□ 0.17
CLCN1-201ENST00000343257 EDEM3Q9BZQ6 932 aa16.13■□□□□ 0.17
CLCN1-201ENST00000343257 GANQ9H2C0 597 aa16.13■□□□□ 0.17
CLCN1-201ENST00000343257 ADAM22Q9P0K1 906 aa16.13■□□□□ 0.17
CLCN1-201ENST00000343257 CPSF2Q9P2I0 782 aaKnown RBP16.13■□□□□ 0.17
CLCN1-201ENST00000343257 NKX1-2Q9UD57 310 aaPredicted RBP16.13■□□□□ 0.17
CLCN1-201ENST00000343257 SAP30BPQ9UHR5 308 aaKnown RBP16.13■□□□□ 0.17
CLCN1-201ENST00000343257 CCDC169A6NNP5 214 aa16.12■□□□□ 0.17
CLCN1-201ENST00000343257 SNX3O60493 162 aa16.12■□□□□ 0.17
CLCN1-201ENST00000343257 LGR5O75473 907 aa16.12■□□□□ 0.17
CLCN1-201ENST00000343257 KRT18P05783 430 aaKnown RBP16.12■□□□□ 0.17
CLCN1-201ENST00000343257 ATP2A2P16615 1042 aaKnown RBP16.12■□□□□ 0.17
CLCN1-201ENST00000343257 KRT79Q5XKE5 535 aa16.12■□□□□ 0.17
CLCN1-201ENST00000343257 COA7Q96BR5 231 aa16.12■□□□□ 0.17
CLCN1-201ENST00000343257 CRNKL1Q9BZJ0 848 aaKnown RBP16.12■□□□□ 0.17
CLCN1-201ENST00000343257 NSRP1Q9H0G5 558 aaKnown RBP16.12■□□□□ 0.17
CLCN1-201ENST00000343257 SH3GLB2Q9NR46 395 aa16.12■□□□□ 0.17
CLCN1-201ENST00000343257 ZMYND8Q9ULU4 1186 aaPredicted RBP16.12■□□□□ 0.17
CLCN1-201ENST00000343257 MYH1P12882 1939 aa16.12■□□□□ 0.17
CLCN1-201ENST00000343257 PVALEFA0A1B0GWK0 134 aa16.12■□□□□ 0.17
CLCN1-201ENST00000343257 MAP3K13O43283 966 aa16.12■□□□□ 0.17
CLCN1-201ENST00000343257 EIF3BP55884 814 aaKnown RBP16.12■□□□□ 0.17
CLCN1-201ENST00000343257 COPS2P61201 443 aa16.12■□□□□ 0.17
CLCN1-201ENST00000343257 IFI16Q16666 785 aaKnown RBP16.12■□□□□ 0.17
CLCN1-201ENST00000343257 NT5DC3Q86UY8 548 aa16.12■□□□□ 0.17
CLCN1-201ENST00000343257 SLC4A9Q96Q91 983 aa16.12■□□□□ 0.17
CLCN1-201ENST00000343257 PIGSQ96S52 555 aa16.12■□□□□ 0.17
CLCN1-201ENST00000343257 PABPC3Q9H361 631 aaKnown RBP16.12■□□□□ 0.17
CLCN1-201ENST00000343257 SLITRK6Q9H5Y7 841 aa16.12■□□□□ 0.17
CLCN1-201ENST00000343257 AIPL1Q9NZN9 384 aa16.12■□□□□ 0.17
CLCN1-201ENST00000343257 USP15Q9Y4E8 981 aaPredicted RBP16.12■□□□□ 0.17
CLCN1-201ENST00000343257 DUOX1Q9NRD9 1551 aa16.12■□□□□ 0.17
CLCN1-201ENST00000343257 UCHL3P15374 230 aa16.12■□□□□ 0.17
CLCN1-201ENST00000343257 CCND1P24385 295 aa16.12■□□□□ 0.17
CLCN1-201ENST00000343257 PCK1P35558 622 aa16.12■□□□□ 0.17
CLCN1-201ENST00000343257 TNNI2P48788 182 aa16.12■□□□□ 0.17
CLCN1-201ENST00000343257 CTCFP49711 727 aaPredicted RBP16.12■□□□□ 0.17
CLCN1-201ENST00000343257 LACTBP83111 547 aaPredicted RBP16.12■□□□□ 0.17
CLCN1-201ENST00000343257 KRT25Q7Z3Z0 450 aa16.12■□□□□ 0.17
CLCN1-201ENST00000343257 CCHCR1Q8TD31 782 aa16.12■□□□□ 0.17
CLCN1-201ENST00000343257 HDAC9Q9UKV0 1011 aa16.12■□□□□ 0.17
CLCN1-201ENST00000343257 ACSL3O95573 720 aa16.11■□□□□ 0.17
CLCN1-201ENST00000343257 IL2RBP14784 551 aa16.11■□□□□ 0.17
CLCN1-201ENST00000343257 GALCP54803 685 aa16.11■□□□□ 0.17
CLCN1-201ENST00000343257 ATP11AP98196 1134 aa16.11■□□□□ 0.17
CLCN1-201ENST00000343257 RIPK1Q13546 671 aa16.11■□□□□ 0.17
CLCN1-201ENST00000343257 TRIM59Q8IWR1 403 aa16.11■□□□□ 0.17
CLCN1-201ENST00000343257 FITM2Q8N6M3 262 aa16.11■□□□□ 0.17
CLCN1-201ENST00000343257 SYN2Q92777 582 aaPredicted RBP16.11■□□□□ 0.17
CLCN1-201ENST00000343257 CENPTQ96BT3 561 aa16.11■□□□□ 0.17
CLCN1-201ENST00000343257 RMDN2Q96LZ7 410 aa16.11■□□□□ 0.17
CLCN1-201ENST00000343257 PAIP2Q9BPZ3 127 aaKnown RBP16.11■□□□□ 0.17
CLCN1-201ENST00000343257 ERP44Q9BS26 406 aa16.11■□□□□ 0.17
CLCN1-201ENST00000343257 PIDD1Q9HB75 910 aa16.11■□□□□ 0.17
CLCN1-201ENST00000343257 C6orf50Q9HD87 102 aa16.11■□□□□ 0.17
CLCN1-201ENST00000343257 MYH4Q9Y623 1939 aa16.11■□□□□ 0.17
CLCN1-201ENST00000343257 DPPA5A6NC42 116 aa16.11■□□□□ 0.17
CLCN1-201ENST00000343257 RASGRF2O14827 1237 aa16.11■□□□□ 0.17
CLCN1-201ENST00000343257 SMIM24O75264 130 aa16.11■□□□□ 0.17
CLCN1-201ENST00000343257 GH1P01241 217 aa16.11■□□□□ 0.17
CLCN1-201ENST00000343257 TUBP50607 506 aa16.11■□□□□ 0.17
CLCN1-201ENST00000343257 CNGA2Q16280 664 aa16.11■□□□□ 0.17
CLCN1-201ENST00000343257 TMEM266Q2M3C6 531 aa16.11■□□□□ 0.17
CLCN1-201ENST00000343257 DCAF12L1Q5VU92 463 aa16.11■□□□□ 0.17
CLCN1-201ENST00000343257 BARGINQ6ZT62 677 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms