RNA–Protein interactions for RNA: ENST00000340513.4

TPX2-202, Transcript of TPX2, microtubule nucleation factor, humanhuman

TSL 1 (best) BASIC

Gene TPX2, Length 3,605 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPX2-202ENST00000340513 ATICP31939 592 aa12.85□□□□□ -0.35
TPX2-202ENST00000340513 RFC1P35251 1148 aaPredicted RBP12.85□□□□□ -0.35
TPX2-202ENST00000340513 ADD1P35611 737 aaKnown RBP12.85□□□□□ -0.35
TPX2-202ENST00000340513 IARSP41252 1262 aaKnown RBP12.85□□□□□ -0.35
TPX2-202ENST00000340513 PRKCIP41743 596 aa12.85□□□□□ -0.35
TPX2-202ENST00000340513 KCNA1Q09470 495 aa12.85□□□□□ -0.35
TPX2-202ENST00000340513 NMIQ13287 307 aaPredicted RBP12.85□□□□□ -0.35
TPX2-202ENST00000340513 E2F2Q14209 437 aa12.85□□□□□ -0.35
TPX2-202ENST00000340513 ITIH4Q14624 930 aa12.85□□□□□ -0.35
TPX2-202ENST00000340513 LRRC14Q15048 493 aa12.85□□□□□ -0.35
TPX2-202ENST00000340513 ANKRD13BQ86YJ7 626 aa12.85□□□□□ -0.35
TPX2-202ENST00000340513 CCDC125Q86Z20 511 aa12.85□□□□□ -0.35
TPX2-202ENST00000340513 LRRC43Q8N309 656 aa12.85□□□□□ -0.35
TPX2-202ENST00000340513 PDZD8Q8NEN9 1154 aa12.85□□□□□ -0.35
TPX2-202ENST00000340513 CASKIN2Q8WXE0 1202 aa12.85□□□□□ -0.35
TPX2-202ENST00000340513 IQCDQ96DY2 449 aa12.85□□□□□ -0.35
TPX2-202ENST00000340513 ZNF333Q96JL9 665 aa12.85□□□□□ -0.35
TPX2-202ENST00000340513 VPS16Q9H269 839 aa12.85□□□□□ -0.35
TPX2-202ENST00000340513 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.85□□□□□ -0.35
TPX2-202ENST00000340513 PCDHA5Q9Y5H7 936 aa12.85□□□□□ -0.35
TPX2-202ENST00000340513 CFAP69A5D8W1 941 aa12.85□□□□□ -0.35
TPX2-202ENST00000340513 TTC34A8MYJ7 566 aa12.85□□□□□ -0.35
TPX2-202ENST00000340513 CAPN9O14815 690 aa12.85□□□□□ -0.35
TPX2-202ENST00000340513 ERVK-24P63145 666 aa12.85□□□□□ -0.35
TPX2-202ENST00000340513 CNGA3Q16281 694 aa12.85□□□□□ -0.35
TPX2-202ENST00000340513 ARHGAP24Q8N264 748 aa12.85□□□□□ -0.35
TPX2-202ENST00000340513 PHACTR3Q96KR7 559 aa12.85□□□□□ -0.35
TPX2-202ENST00000340513 KRT12Q99456 494 aa12.85□□□□□ -0.35
TPX2-202ENST00000340513 C12orf4Q9NQ89 552 aa12.85□□□□□ -0.35
TPX2-202ENST00000340513 COMMD8Q9NX08 183 aa12.85□□□□□ -0.35
TPX2-202ENST00000340513 MED14O60244 1454 aa12.85□□□□□ -0.35
TPX2-202ENST00000340513 SRRM3A6NNA2 597 aaPredicted RBP12.85□□□□□ -0.35
TPX2-202ENST00000340513 NDUFA10O95299 355 aa12.85□□□□□ -0.35
TPX2-202ENST00000340513 TCEA1P23193 301 aaKnown RBP12.85□□□□□ -0.35
TPX2-202ENST00000340513 TRADDQ15628 312 aa12.85□□□□□ -0.35
TPX2-202ENST00000340513 CACTIN-AS1Q8N1I8 211 aa12.85□□□□□ -0.35
TPX2-202ENST00000340513 CAVIN3Q969G5 261 aa12.85□□□□□ -0.35
TPX2-202ENST00000340513 ACAP3Q96P50 834 aa12.85□□□□□ -0.35
TPX2-202ENST00000340513 CYTH2Q99418 400 aa12.85□□□□□ -0.35
TPX2-202ENST00000340513 DDX56Q9NY93 547 aaKnown RBP12.85□□□□□ -0.35
TPX2-202ENST00000340513 GIT1Q9Y2X7 761 aa12.85□□□□□ -0.35
TPX2-202ENST00000340513 DEPDC5O75140 1603 aa12.84□□□□□ -0.35
TPX2-202ENST00000340513 FOXN1O15353 648 aa12.84□□□□□ -0.35
TPX2-202ENST00000340513 GIGYF1O75420 1035 aaPredicted RBP12.84□□□□□ -0.35
TPX2-202ENST00000340513 HOXD10P28358 340 aa12.84□□□□□ -0.35
TPX2-202ENST00000340513 TAF12Q16514 161 aa12.84□□□□□ -0.35
TPX2-202ENST00000340513 NFRKBQ6P4R8 1299 aa12.84□□□□□ -0.35
TPX2-202ENST00000340513 HDGFL2Q7Z4V5 671 aaPredicted RBP12.84□□□□□ -0.35
TPX2-202ENST00000340513 DTX3Q8N9I9 347 aa12.84□□□□□ -0.35
TPX2-202ENST00000340513 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.84□□□□□ -0.35
TPX2-202ENST00000340513 C1orf131Q8NDD1 294 aaKnown RBP12.84□□□□□ -0.35
TPX2-202ENST00000340513 HAPLN3Q96S86 360 aa12.84□□□□□ -0.35
TPX2-202ENST00000340513 VPS51Q9UID3 782 aa12.84□□□□□ -0.35
TPX2-202ENST00000340513 AFF2P51816 1311 aa12.84□□□□□ -0.35
TPX2-202ENST00000340513 PASKQ96RG2 1323 aa12.84□□□□□ -0.35
TPX2-202ENST00000340513 ZBED1O96006 694 aa12.84□□□□□ -0.35
TPX2-202ENST00000340513 CYP27A1Q02318 531 aa12.84□□□□□ -0.35
TPX2-202ENST00000340513 PTK2Q05397 1052 aa12.84□□□□□ -0.35
TPX2-202ENST00000340513 FMR1Q06787 632 aaKnown RBP eCLIP12.84□□□□□ -0.354e-7■■■□□ 16.3
TPX2-202ENST00000340513 CCDC81Q6ZN84 652 aa12.84□□□□□ -0.35
TPX2-202ENST00000340513 RFPL4BQ6ZWI9 263 aa12.84□□□□□ -0.35
TPX2-202ENST00000340513 ANKRD36BP1Q96IX9 119 aa12.84□□□□□ -0.35
TPX2-202ENST00000340513 FAM227BQ96M60 508 aa12.84□□□□□ -0.35
TPX2-202ENST00000340513 PPP1R10Q96QC0 940 aaKnown RBP12.84□□□□□ -0.35
TPX2-202ENST00000340513 KCNMB3Q9NPA1 279 aa12.84□□□□□ -0.35
TPX2-202ENST00000340513 FGFR1OP2Q9NVK5 253 aa12.84□□□□□ -0.35
TPX2-202ENST00000340513 TLR7Q9NYK1 1049 aaKnown RBP12.84□□□□□ -0.35
TPX2-202ENST00000340513 DUSP10Q9Y6W6 482 aa12.84□□□□□ -0.35
TPX2-202ENST00000340513 IQSEC2Q5JU85 1478 aa12.84□□□□□ -0.35
TPX2-202ENST00000340513 TTI1O43156 1089 aa12.83□□□□□ -0.35
TPX2-202ENST00000340513 RASSF2P50749 326 aa12.83□□□□□ -0.35
TPX2-202ENST00000340513 AMPD3Q01432 767 aa12.83□□□□□ -0.35
TPX2-202ENST00000340513 CERKLQ49MI3 558 aaPredicted RBP12.83□□□□□ -0.35
TPX2-202ENST00000340513 ANKMY2Q8IV38 441 aa12.83□□□□□ -0.35
TPX2-202ENST00000340513 ESX1Q8N693 406 aa12.83□□□□□ -0.35
TPX2-202ENST00000340513 SPERTQ8NA61 448 aa12.83□□□□□ -0.35
TPX2-202ENST00000340513 RSPH9Q9H1X1 276 aaPredicted RBP12.83□□□□□ -0.35
TPX2-202ENST00000340513 WDR6Q9NNW5 1121 aaKnown RBP12.83□□□□□ -0.35
TPX2-202ENST00000340513 ARHGEF3Q9NR81 526 aa12.83□□□□□ -0.35
TPX2-202ENST00000340513 GJB4Q9NTQ9 266 aa12.83□□□□□ -0.35
TPX2-202ENST00000340513 FAIMQ9NVQ4 179 aa12.83□□□□□ -0.35
TPX2-202ENST00000340513 USP15Q9Y4E8 981 aaPredicted RBP12.83□□□□□ -0.35
TPX2-202ENST00000340513 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.83□□□□□ -0.36
TPX2-202ENST00000340513 E7ENQ6 273 aa12.83□□□□□ -0.36
TPX2-202ENST00000340513 PSMD14O00487 310 aa12.83□□□□□ -0.36
TPX2-202ENST00000340513 TARSP26639 723 aaKnown RBP12.83□□□□□ -0.36
TPX2-202ENST00000340513 BIRC3Q13489 604 aa12.83□□□□□ -0.36
TPX2-202ENST00000340513 ATP1A4Q13733 1029 aa12.83□□□□□ -0.36
TPX2-202ENST00000340513 TOB2Q14106 344 aaPredicted RBP12.83□□□□□ -0.36
TPX2-202ENST00000340513 HAUS3Q68CZ6 603 aa12.83□□□□□ -0.36
TPX2-202ENST00000340513 LRRC49Q8IUZ0 686 aa12.83□□□□□ -0.36
TPX2-202ENST00000340513 STARD8Q92502 1023 aa12.83□□□□□ -0.36
TPX2-202ENST00000340513 RBM12Q9NTZ6 932 aaKnown RBP12.83□□□□□ -0.36
TPX2-202ENST00000340513 KLHL14Q9P2G3 628 aa12.83□□□□□ -0.36
TPX2-202ENST00000340513 HAO1Q9UJM8 370 aa12.83□□□□□ -0.36
TPX2-202ENST00000340513 TTLL3Q9Y4R7 772 aa12.83□□□□□ -0.36
TPX2-202ENST00000340513 PTPDC1A2A3K4 754 aa12.83□□□□□ -0.36
TPX2-202ENST00000340513 BIRC5O15392 142 aa12.83□□□□□ -0.36
TPX2-202ENST00000340513 GMNNO75496 209 aa12.83□□□□□ -0.36
TPX2-202ENST00000340513 CDK4P11802 303 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms