RNA–Protein interactions for RNA: ENST00000335727.13

TNRC6B-202, Transcript of trinucleotide repeat containing 6B, humanhuman

TSL 1 (best) BASIC

Gene TNRC6B, Length 17,933 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6B-202ENST00000335727 TNNI3KQ59H18 835 aa5.71□□□□□ -1.5
TNRC6B-202ENST00000335727 LGSNQ5TDP6 509 aa5.71□□□□□ -1.5
TNRC6B-202ENST00000335727 CENPUQ71F23 418 aa5.71□□□□□ -1.5
TNRC6B-202ENST00000335727 MARK2Q7KZI7 788 aaKnown RBP5.71□□□□□ -1.5
TNRC6B-202ENST00000335727 NECTIN2Q92692 538 aa5.71□□□□□ -1.5
TNRC6B-202ENST00000335727 GAKO14976 1311 aa5.71□□□□□ -1.5
TNRC6B-202ENST00000335727 MARK3P27448 753 aa5.71□□□□□ -1.5
TNRC6B-202ENST00000335727 INPP1P49441 399 aa5.71□□□□□ -1.5
TNRC6B-202ENST00000335727 EDC3Q96F86 508 aaKnown RBP5.71□□□□□ -1.5
TNRC6B-202ENST00000335727 KAT14Q9H8E8 782 aa5.71□□□□□ -1.5
TNRC6B-202ENST00000335727 WASHC2DQ5SRD0 308 aa5.71□□□□□ -1.5
TNRC6B-202ENST00000335727 IARS2Q9NSE4 1012 aaKnown RBP5.71□□□□□ -1.5
TNRC6B-202ENST00000335727 TBC1D14Q9P2M4 693 aa5.71□□□□□ -1.5
TNRC6B-202ENST00000335727 SAMM50Q9Y512 469 aa5.71□□□□□ -1.5
TNRC6B-202ENST00000335727 NCOA3Q9Y6Q9 1424 aa5.71□□□□□ -1.5
TNRC6B-202ENST00000335727 WASLO00401 505 aaPredicted RBP5.71□□□□□ -1.5
TNRC6B-202ENST00000335727 MTSS1O43312 755 aa5.71□□□□□ -1.5
TNRC6B-202ENST00000335727 DNAL1Q4LDG9 190 aa5.71□□□□□ -1.5
TNRC6B-202ENST00000335727 GSTA5Q7RTV2 222 aa5.71□□□□□ -1.5
TNRC6B-202ENST00000335727 NME9Q86XW9 330 aa5.71□□□□□ -1.5
TNRC6B-202ENST00000335727 USP15Q9Y4E8 981 aaPredicted RBP5.71□□□□□ -1.5
TNRC6B-202ENST00000335727 TTLL3Q9Y4R7 772 aa5.71□□□□□ -1.5
TNRC6B-202ENST00000335727 IFIT3O14879 490 aaKnown RBP5.71□□□□□ -1.5
TNRC6B-202ENST00000335727 DDB1Q16531 1140 aa5.71□□□□□ -1.5
TNRC6B-202ENST00000335727 PTGISQ16647 500 aa5.71□□□□□ -1.5
TNRC6B-202ENST00000335727 CCDC103Q8IW40 242 aa5.71□□□□□ -1.5
TNRC6B-202ENST00000335727 STK32AQ8WU08 396 aa5.71□□□□□ -1.5
TNRC6B-202ENST00000335727 BORCS5Q969J3 196 aa5.71□□□□□ -1.5
TNRC6B-202ENST00000335727 TUFT1Q9NNX1 390 aa5.71□□□□□ -1.5
TNRC6B-202ENST00000335727 POTEMA6NI47 508 aa5.71□□□□□ -1.5
TNRC6B-202ENST00000335727 INO80B-WBP1J3KQ70 363 aa5.71□□□□□ -1.5
TNRC6B-202ENST00000335727 FOXN3O00409 490 aaPredicted RBP5.71□□□□□ -1.5
TNRC6B-202ENST00000335727 ARMC3Q5W041 872 aa5.71□□□□□ -1.5
TNRC6B-202ENST00000335727 POTEHQ6S545 545 aa5.71□□□□□ -1.5
TNRC6B-202ENST00000335727 POTEGQ6S5H5 508 aa5.71□□□□□ -1.5
TNRC6B-202ENST00000335727 USP16Q9Y5T5 823 aa5.71□□□□□ -1.5
TNRC6B-202ENST00000335727 CLPTM1O96005 669 aa5.71□□□□□ -1.5
TNRC6B-202ENST00000335727 SYKP43405 635 aa5.71□□□□□ -1.5
TNRC6B-202ENST00000335727 IST1P53990 364 aa5.71□□□□□ -1.5
TNRC6B-202ENST00000335727 ANKRD13DQ6ZTN6 518 aa5.71□□□□□ -1.5
TNRC6B-202ENST00000335727 PJA1Q8NG27 643 aa5.71□□□□□ -1.5
TNRC6B-202ENST00000335727 CD248Q9HCU0 757 aa5.71□□□□□ -1.5
TNRC6B-202ENST00000335727 FADS2P1A8MWK0 482 aa5.71□□□□□ -1.5
TNRC6B-202ENST00000335727 ARF4P18085 180 aaPredicted RBP5.71□□□□□ -1.5
TNRC6B-202ENST00000335727 GRM1Q13255 1194 aa5.71□□□□□ -1.5
TNRC6B-202ENST00000335727 CNPY3Q9BT09 278 aa5.71□□□□□ -1.5
TNRC6B-202ENST00000335727 WDR12Q9GZL7 423 aaKnown RBP5.71□□□□□ -1.5
TNRC6B-202ENST00000335727 PNMA8CA0A1B0GUJ8 204 aa5.7□□□□□ -1.5
TNRC6B-202ENST00000335727 NR1H2P55055 460 aa5.7□□□□□ -1.5
TNRC6B-202ENST00000335727 EPC2Q52LR7 807 aa5.7□□□□□ -1.5
TNRC6B-202ENST00000335727 PLA2G4DQ86XP0 818 aa5.7□□□□□ -1.5
TNRC6B-202ENST00000335727 TEX13BQ9BXU2 312 aa5.7□□□□□ -1.5
TNRC6B-202ENST00000335727 ZNF180Q9UJW8 692 aa5.7□□□□□ -1.5
TNRC6B-202ENST00000335727 VCPP55072 806 aaKnown RBP5.7□□□□□ -1.5
TNRC6B-202ENST00000335727 SFMBT2Q5VUG0 894 aa5.7□□□□□ -1.5
TNRC6B-202ENST00000335727 ANKRD44Q8N8A2 993 aa5.7□□□□□ -1.5
TNRC6B-202ENST00000335727 TATDN2Q93075 761 aa5.7□□□□□ -1.5
TNRC6B-202ENST00000335727 BEGAINQ9BUH8 593 aa5.7□□□□□ -1.5
TNRC6B-202ENST00000335727 NRBP1Q9UHY1 535 aa5.7□□□□□ -1.5
TNRC6B-202ENST00000335727 H7C1W4 665 aa5.7□□□□□ -1.5
TNRC6B-202ENST00000335727 CFAP70Q5T0N1 1121 aa5.7□□□□□ -1.5
TNRC6B-202ENST00000335727 DDI2Q5TDH0 399 aa5.7□□□□□ -1.5
TNRC6B-202ENST00000335727 ZSCAN29Q8IWY8 852 aaPredicted RBP5.7□□□□□ -1.5
TNRC6B-202ENST00000335727 TBATAQ96M53 351 aa5.7□□□□□ -1.5
TNRC6B-202ENST00000335727 CCDC134Q9H6E4 229 aa5.7□□□□□ -1.5
TNRC6B-202ENST00000335727 HERC5Q9UII4 1024 aaKnown RBP5.7□□□□□ -1.5
TNRC6B-202ENST00000335727 MAP3K15Q6ZN16 1313 aa5.7□□□□□ -1.5
TNRC6B-202ENST00000335727 NQO1P15559 274 aaKnown RBP5.7□□□□□ -1.5
TNRC6B-202ENST00000335727 CYP4F8P98187 520 aa5.7□□□□□ -1.5
TNRC6B-202ENST00000335727 SPATA5Q8NB90 893 aa5.7□□□□□ -1.5
TNRC6B-202ENST00000335727 ACAP3Q96P50 834 aa5.7□□□□□ -1.5
TNRC6B-202ENST00000335727 CINPQ9BW66 212 aaPredicted RBP5.7□□□□□ -1.5
TNRC6B-202ENST00000335727 MAGEE1Q9HCI5 957 aa5.7□□□□□ -1.5
TNRC6B-202ENST00000335727 VPS4AQ9UN37 437 aa5.7□□□□□ -1.5
TNRC6B-202ENST00000335727 APAF1O14727 1248 aa5.7□□□□□ -1.5
TNRC6B-202ENST00000335727 FANCCQ00597 558 aa5.7□□□□□ -1.5
TNRC6B-202ENST00000335727 ANKRD35Q8N283 1001 aa5.7□□□□□ -1.5
TNRC6B-202ENST00000335727 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.7□□□□□ -1.5
TNRC6B-202ENST00000335727 MDM1Q8TC05 714 aa5.7□□□□□ -1.5
TNRC6B-202ENST00000335727 C8orf48Q96LL4 319 aa5.7□□□□□ -1.5
TNRC6B-202ENST00000335727 ASCC2Q9H1I8 757 aaPredicted RBP5.7□□□□□ -1.5
TNRC6B-202ENST00000335727 ABCC12Q96J65 1359 aa5.7□□□□□ -1.5
TNRC6B-202ENST00000335727 NFIL3Q16649 462 aa5.7□□□□□ -1.5
TNRC6B-202ENST00000335727 AKAP14Q86UN6 197 aa5.7□□□□□ -1.5
TNRC6B-202ENST00000335727 TCEAL7Q9BRU2 100 aa5.7□□□□□ -1.5
TNRC6B-202ENST00000335727 ELAC1Q9H777 363 aaKnown RBP5.7□□□□□ -1.5
TNRC6B-202ENST00000335727 NUP62P37198 522 aaPredicted RBP5.7□□□□□ -1.5
TNRC6B-202ENST00000335727 RESTQ13127 1097 aa5.7□□□□□ -1.5
TNRC6B-202ENST00000335727 TRMT5Q32P41 509 aaKnown RBP5.7□□□□□ -1.5
TNRC6B-202ENST00000335727 MTERF2Q49AM1 385 aa5.7□□□□□ -1.5
TNRC6B-202ENST00000335727 C6orf62Q9GZU0 229 aaPredicted RBP5.7□□□□□ -1.5
TNRC6B-202ENST00000335727 PFDN6O15212 129 aa5.7□□□□□ -1.5
TNRC6B-202ENST00000335727 SULT1C3Q6IMI6 304 aa5.7□□□□□ -1.5
TNRC6B-202ENST00000335727 ANKRD49Q8WVL7 239 aa5.7□□□□□ -1.5
TNRC6B-202ENST00000335727 OTULINQ96BN8 352 aa5.7□□□□□ -1.5
TNRC6B-202ENST00000335727 MND1Q9BWT6 205 aa5.7□□□□□ -1.5
TNRC6B-202ENST00000335727 TCP11X1B4DZS4 312 aa5.7□□□□□ -1.5
TNRC6B-202ENST00000335727 RAB25P57735 213 aa5.7□□□□□ -1.5
TNRC6B-202ENST00000335727 EFR3AQ14156 821 aa5.7□□□□□ -1.5
TNRC6B-202ENST00000335727 ASIC2Q16515 512 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms