RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 CNOT1A5YKK6 2376 aaKnown RBP17.14■□□□□ 0.33
CTHRC1-201ENST00000330295 MBLAC1A4D2B0 266 aaPredicted RBP17.14■□□□□ 0.33
CTHRC1-201ENST00000330295 SLC30A4O14863 429 aa17.14■□□□□ 0.33
CTHRC1-201ENST00000330295 RPLP2P05387 115 aaKnown RBP17.14■□□□□ 0.33
CTHRC1-201ENST00000330295 GOLGA8HP0CJ92 632 aa17.14■□□□□ 0.33
CTHRC1-201ENST00000330295 GLULP15104 373 aa17.14■□□□□ 0.33
CTHRC1-201ENST00000330295 KRT17Q04695 432 aa17.14■□□□□ 0.33
CTHRC1-201ENST00000330295 IER5Q5VY09 327 aa17.14■□□□□ 0.33
CTHRC1-201ENST00000330295 STOX1Q6ZVD7 989 aa17.14■□□□□ 0.33
CTHRC1-201ENST00000330295 FEZF2Q8TBJ5 459 aa17.14■□□□□ 0.33
CTHRC1-201ENST00000330295 NETO1Q8TDF5 533 aa17.14■□□□□ 0.33
CTHRC1-201ENST00000330295 PARD6AQ9NPB6 346 aa17.14■□□□□ 0.33
CTHRC1-201ENST00000330295 TCP11L1Q9NUJ3 509 aa17.14■□□□□ 0.33
CTHRC1-201ENST00000330295 PCDHGA2Q9Y5H1 932 aa17.14■□□□□ 0.33
CTHRC1-201ENST00000330295 IGSF9BQ9UPX0 1349 aa17.14■□□□□ 0.33
CTHRC1-201ENST00000330295 CEP295Q9C0D2 2601 aa17.14■□□□□ 0.33
CTHRC1-201ENST00000330295 SOBPA7XYQ1 873 aa17.13■□□□□ 0.33
CTHRC1-201ENST00000330295 PDE4AP27815 886 aa17.13■□□□□ 0.33
CTHRC1-201ENST00000330295 CCND2P30279 289 aa17.13■□□□□ 0.33
CTHRC1-201ENST00000330295 PPM1AP35813 382 aa17.13■□□□□ 0.33
CTHRC1-201ENST00000330295 NEDD9Q14511 834 aa17.13■□□□□ 0.33
CTHRC1-201ENST00000330295 GRIK4Q16099 956 aa17.13■□□□□ 0.33
CTHRC1-201ENST00000330295 MARCH8Q5T0T0 291 aa17.13■□□□□ 0.33
CTHRC1-201ENST00000330295 TMC5Q6UXY8 1006 aa17.13■□□□□ 0.33
CTHRC1-201ENST00000330295 ATRIPQ8WXE1 791 aa17.13■□□□□ 0.33
CTHRC1-201ENST00000330295 SEC62Q99442 399 aaKnown RBP17.13■□□□□ 0.33
CTHRC1-201ENST00000330295 FAM49AQ9H0Q0 323 aaPredicted RBP17.13■□□□□ 0.33
CTHRC1-201ENST00000330295 EPC1Q9H2F5 836 aa17.13■□□□□ 0.33
CTHRC1-201ENST00000330295 TELO2Q9Y4R8 837 aa17.13■□□□□ 0.33
CTHRC1-201ENST00000330295 TRPV2Q9Y5S1 764 aa17.13■□□□□ 0.33
CTHRC1-201ENST00000330295 OPLAHO14841 1288 aa17.12■□□□□ 0.33
CTHRC1-201ENST00000330295 PMLP29590 882 aa17.12■□□□□ 0.33
CTHRC1-201ENST00000330295 GHRHRQ02643 423 aa17.12■□□□□ 0.33
CTHRC1-201ENST00000330295 NONOQ15233 471 aaKnown RBP eCLIP17.12■□□□□ 0.33
CTHRC1-201ENST00000330295 QRICH1Q2TAL8 776 aa17.12■□□□□ 0.33
CTHRC1-201ENST00000330295 C20orf194Q5TEA3 1177 aa17.12■□□□□ 0.33
CTHRC1-201ENST00000330295 KCNT2Q6UVM3 1135 aa17.12■□□□□ 0.33
CTHRC1-201ENST00000330295 RSAD2Q8WXG1 361 aa17.12■□□□□ 0.33
CTHRC1-201ENST00000330295 ANAPC4Q9UJX5 808 aa17.12■□□□□ 0.33
CTHRC1-201ENST00000330295 FBXO4Q9UKT5 387 aa17.12■□□□□ 0.33
CTHRC1-201ENST00000330295 M0QZ92 97 aa17.11■□□□□ 0.33
CTHRC1-201ENST00000330295 PROS1P07225 676 aa17.11■□□□□ 0.33
CTHRC1-201ENST00000330295 FGRP09769 529 aa17.11■□□□□ 0.33
CTHRC1-201ENST00000330295 SRFP11831 508 aa17.11■□□□□ 0.33
CTHRC1-201ENST00000330295 EPCAMP16422 314 aa17.11■□□□□ 0.33
CTHRC1-201ENST00000330295 CA8P35219 290 aa17.11■□□□□ 0.33
CTHRC1-201ENST00000330295 PBX3P40426 434 aa17.11■□□□□ 0.33
CTHRC1-201ENST00000330295 SHC2P98077 582 aa17.11■□□□□ 0.33
CTHRC1-201ENST00000330295 TMEM62Q0P6H9 643 aa17.11■□□□□ 0.33
CTHRC1-201ENST00000330295 GPR149Q86SP6 731 aa17.11■□□□□ 0.33
CTHRC1-201ENST00000330295 ADGRF4Q8IZF3 695 aa17.11■□□□□ 0.33
CTHRC1-201ENST00000330295 PJA1Q8NG27 643 aa17.11■□□□□ 0.33
CTHRC1-201ENST00000330295 ZNF558Q96NG5 402 aa17.11■□□□□ 0.33
CTHRC1-201ENST00000330295 ARHGEF3Q9NR81 526 aa17.11■□□□□ 0.33
CTHRC1-201ENST00000330295 TOMM22Q9NS69 142 aa17.11■□□□□ 0.33
CTHRC1-201ENST00000330295 FRYQ5TBA9 3013 aa17.1■□□□□ 0.33
CTHRC1-201ENST00000330295 MIA3Q5JRA6 1907 aa17.1■□□□□ 0.33
CTHRC1-201ENST00000330295 C2orf16Q68DN1 1984 aa17.1■□□□□ 0.33
CTHRC1-201ENST00000330295 MGEA5O60502 916 aa17.1■□□□□ 0.33
CTHRC1-201ENST00000330295 FGFR1P11362 822 aa17.1■□□□□ 0.33
CTHRC1-201ENST00000330295 TMEM266Q2M3C6 531 aa17.1■□□□□ 0.33
CTHRC1-201ENST00000330295 GNPTABQ3T906 1256 aa17.1■□□□□ 0.33
CTHRC1-201ENST00000330295 RRP12Q5JTH9 1297 aaKnown RBP17.1■□□□□ 0.33
CTHRC1-201ENST00000330295 SLC24A5Q71RS6 500 aa17.1■□□□□ 0.33
CTHRC1-201ENST00000330295 CABP7Q86V35 215 aa17.1■□□□□ 0.33
CTHRC1-201ENST00000330295 ZBTB44Q8NCP5 570 aa17.1■□□□□ 0.33
CTHRC1-201ENST00000330295 GPR152Q8TDT2 470 aa17.1■□□□□ 0.33
CTHRC1-201ENST00000330295 TTC14Q96N46 770 aa17.1■□□□□ 0.33
CTHRC1-201ENST00000330295 FOXQ1Q9C009 403 aa17.1■□□□□ 0.33
CTHRC1-201ENST00000330295 C1orf112Q9NSG2 853 aa17.1■□□□□ 0.33
CTHRC1-201ENST00000330295 MAP3K20Q9NYL2 800 aaKnown RBP17.1■□□□□ 0.33
CTHRC1-201ENST00000330295 SPG21Q9NZD8 308 aa17.1■□□□□ 0.33
CTHRC1-201ENST00000330295 GMEB2Q9UKD1 530 aa17.1■□□□□ 0.33
CTHRC1-201ENST00000330295 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.1■□□□□ 0.33
CTHRC1-201ENST00000330295 PATJQ8NI35 1801 aa17.1■□□□□ 0.33
CTHRC1-201ENST00000330295 SPEGQ15772 3267 aa17.09■□□□□ 0.33
CTHRC1-201ENST00000330295 FOXP2O15409 715 aa17.09■□□□□ 0.33
CTHRC1-201ENST00000330295 LAMTOR5O43504 91 aa17.09■□□□□ 0.33
CTHRC1-201ENST00000330295 HOXA13P31271 388 aaPredicted RBP17.09■□□□□ 0.33
CTHRC1-201ENST00000330295 SP4Q02446 784 aa17.09■□□□□ 0.33
CTHRC1-201ENST00000330295 NFX1Q12986 1120 aaKnown RBP17.09■□□□□ 0.33
CTHRC1-201ENST00000330295 SLC44A3Q8N4M1 653 aa17.09■□□□□ 0.33
CTHRC1-201ENST00000330295 ZBTB10Q96DT7 871 aa17.09■□□□□ 0.33
CTHRC1-201ENST00000330295 ADAM2Q99965 735 aa17.09■□□□□ 0.33
CTHRC1-201ENST00000330295 CELF4Q9BZC1 486 aaKnown RBP17.09■□□□□ 0.33
CTHRC1-201ENST00000330295 SFXN1Q9H9B4 322 aa17.09■□□□□ 0.33
CTHRC1-201ENST00000330295 ATP6V0A4Q9HBG4 840 aa17.09■□□□□ 0.33
CTHRC1-201ENST00000330295 RGS18Q9NS28 235 aa17.09■□□□□ 0.33
CTHRC1-201ENST00000330295 ECHDC1Q9NTX5 307 aa17.09■□□□□ 0.33
CTHRC1-201ENST00000330295 SPATA6Q9NWH7 488 aaPredicted RBP17.09■□□□□ 0.33
CTHRC1-201ENST00000330295 PCDHA1Q9Y5I3 950 aa17.09■□□□□ 0.33
CTHRC1-201ENST00000330295 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.08■□□□□ 0.32
CTHRC1-201ENST00000330295 DENND3A2RUS2 1198 aa17.08■□□□□ 0.32
CTHRC1-201ENST00000330295 SPATA31C2B4DYI2 1134 aa17.08■□□□□ 0.32
CTHRC1-201ENST00000330295 C9IYK1 514 aa17.08■□□□□ 0.32
CTHRC1-201ENST00000330295 TBC1D4O60343 1298 aa17.08■□□□□ 0.32
CTHRC1-201ENST00000330295 LILRB5O75023 590 aa17.08■□□□□ 0.32
CTHRC1-201ENST00000330295 LRRN2O75325 713 aa17.08■□□□□ 0.32
CTHRC1-201ENST00000330295 CXCL14O95715 111 aa17.08■□□□□ 0.32
CTHRC1-201ENST00000330295 MARK3P27448 753 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms