RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 IL17BQ9UHF5 180 aa7.85□□□□□ -1.15
CSTF3-201ENST00000323959 SYNPO2Q9UMS6 1093 aa7.85□□□□□ -1.15
CSTF3-201ENST00000323959 CARNS1A5YM72 827 aa7.84□□□□□ -1.15
CSTF3-201ENST00000323959 ERVH48-1M5A8F1 160 aa7.84□□□□□ -1.15
CSTF3-201ENST00000323959 PPFIA3O75145 1194 aa7.84□□□□□ -1.15
CSTF3-201ENST00000323959 TXNP10599 105 aaKnown RBP7.84□□□□□ -1.15
CSTF3-201ENST00000323959 KIAA0753Q2KHM9 967 aa7.84□□□□□ -1.15
CSTF3-201ENST00000323959 PAN2Q504Q3 1202 aaKnown RBP7.84□□□□□ -1.15
CSTF3-201ENST00000323959 ZNF710Q8N1W2 664 aa7.84□□□□□ -1.15
CSTF3-201ENST00000323959 DEFB124Q8NES8 71 aa7.84□□□□□ -1.15
CSTF3-201ENST00000323959 SPIRE2Q8WWL2 714 aa7.84□□□□□ -1.15
CSTF3-201ENST00000323959 SRCIN1Q9C0H9 1055 aa7.84□□□□□ -1.15
CSTF3-201ENST00000323959 PCDHB15Q9Y5E8 787 aa7.84□□□□□ -1.15
CSTF3-201ENST00000323959 SQORQ9Y6N5 450 aa7.84□□□□□ -1.15
CSTF3-201ENST00000323959 GREB1LQ9C091 1923 aaPredicted RBP7.84□□□□□ -1.15
CSTF3-201ENST00000323959 E9PAM4 449 aa7.84□□□□□ -1.15
CSTF3-201ENST00000323959 CFBP00751 764 aa7.84□□□□□ -1.15
CSTF3-201ENST00000323959 CXCL12P48061 93 aa7.84□□□□□ -1.15
CSTF3-201ENST00000323959 ARHGAP1Q07960 439 aa7.84□□□□□ -1.15
CSTF3-201ENST00000323959 ADCY1Q08828 1119 aa7.84□□□□□ -1.15
CSTF3-201ENST00000323959 APOBRQ0VD83 1088 aa7.84□□□□□ -1.15
CSTF3-201ENST00000323959 FZD5Q13467 585 aa7.84□□□□□ -1.15
CSTF3-201ENST00000323959 C4orf17Q53FE4 359 aa7.84□□□□□ -1.15
CSTF3-201ENST00000323959 TMC7Q7Z402 723 aa7.84□□□□□ -1.15
CSTF3-201ENST00000323959 DHX37Q8IY37 1157 aaKnown RBP7.84□□□□□ -1.15
CSTF3-201ENST00000323959 GAB3Q8WWW8 586 aa7.84□□□□□ -1.15
CSTF3-201ENST00000323959 FRAT1Q92837 279 aaPredicted RBP7.84□□□□□ -1.15
CSTF3-201ENST00000323959 LIN37Q96GY3 246 aaPredicted RBP7.84□□□□□ -1.15
CSTF3-201ENST00000323959 ZC3H10Q96K80 434 aaKnown RBP7.84□□□□□ -1.15
CSTF3-201ENST00000323959 PI4K2AQ9BTU6 479 aa7.84□□□□□ -1.15
CSTF3-201ENST00000323959 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.84□□□□□ -1.15
CSTF3-201ENST00000323959 AKAP13Q12802 2813 aa7.84□□□□□ -1.15
CSTF3-201ENST00000323959 MAN2B1O00754 1011 aa7.83□□□□□ -1.16
CSTF3-201ENST00000323959 RPLP2P05387 115 aaKnown RBP7.83□□□□□ -1.16
CSTF3-201ENST00000323959 UQCRFS1P1P0C7P4 283 aa7.83□□□□□ -1.16
CSTF3-201ENST00000323959 GNAT1P11488 350 aa7.83□□□□□ -1.16
CSTF3-201ENST00000323959 EDNRBP24530 442 aa7.83□□□□□ -1.16
CSTF3-201ENST00000323959 SLC4A3P48751 1232 aa7.83□□□□□ -1.16
CSTF3-201ENST00000323959 PDE4DQ08499 809 aa7.83□□□□□ -1.16
CSTF3-201ENST00000323959 MTSS1LQ765P7 747 aa7.83□□□□□ -1.16
CSTF3-201ENST00000323959 PIP4P1Q86T03 277 aa7.83□□□□□ -1.16
CSTF3-201ENST00000323959 LRFN2Q9ULH4 789 aa7.83□□□□□ -1.16
CSTF3-201ENST00000323959 AKAP2Q9Y2D5 859 aa7.83□□□□□ -1.16
CSTF3-201ENST00000323959 ASPMQ8IZT6 3477 aa7.83□□□□□ -1.16
CSTF3-201ENST00000323959 PIEZO2Q9H5I5 2752 aa7.83□□□□□ -1.16
CSTF3-201ENST00000323959 IGHDP01880 384 aa7.83□□□□□ -1.16
CSTF3-201ENST00000323959 BMP3P12645 472 aa7.83□□□□□ -1.16
CSTF3-201ENST00000323959 EEF2P13639 858 aaKnown RBP7.83□□□□□ -1.16
CSTF3-201ENST00000323959 SEMA3FQ13275 785 aa7.83□□□□□ -1.16
CSTF3-201ENST00000323959 SNW1Q13573 536 aaKnown RBP7.83□□□□□ -1.16
CSTF3-201ENST00000323959 ATP6V0A1Q93050 837 aa7.83□□□□□ -1.16
CSTF3-201ENST00000323959 PAXBP1Q9Y5B6 917 aa7.83□□□□□ -1.16
CSTF3-201ENST00000323959 IRAK3Q9Y616 596 aa7.83□□□□□ -1.16
CSTF3-201ENST00000323959 CCDC163A0A0D9SF12 145 aa7.82□□□□□ -1.16
CSTF3-201ENST00000323959 SHISA7A6NL88 538 aa7.82□□□□□ -1.16
CSTF3-201ENST00000323959 SLC28A2O43868 658 aa7.82□□□□□ -1.16
CSTF3-201ENST00000323959 N4BP1O75113 896 aaKnown RBP7.82□□□□□ -1.16
CSTF3-201ENST00000323959 POLR3DP05423 398 aaPredicted RBP7.82□□□□□ -1.16
CSTF3-201ENST00000323959 CCDC62Q6P9F0 684 aa7.82□□□□□ -1.16
CSTF3-201ENST00000323959 POTEHQ6S545 545 aa7.82□□□□□ -1.16
CSTF3-201ENST00000323959 TMC5Q6UXY8 1006 aa7.82□□□□□ -1.16
CSTF3-201ENST00000323959 KLHDC4Q8TBB5 520 aa7.82□□□□□ -1.16
CSTF3-201ENST00000323959 ADAMTS14Q8WXS8 1223 aa7.82□□□□□ -1.16
CSTF3-201ENST00000323959 COPS5Q92905 334 aa7.82□□□□□ -1.16
CSTF3-201ENST00000323959 TRERF1Q96PN7 1200 aa7.82□□□□□ -1.16
CSTF3-201ENST00000323959 HDAC5Q9UQL6 1122 aa7.82□□□□□ -1.16
CSTF3-201ENST00000323959 EIF5BO60841 1220 aaKnown RBP7.82□□□□□ -1.16
CSTF3-201ENST00000323959 SCG2P13521 617 aa7.82□□□□□ -1.16
CSTF3-201ENST00000323959 IL12RB1P42701 662 aa7.82□□□□□ -1.16
CSTF3-201ENST00000323959 POLGP54098 1239 aaPredicted RBP7.82□□□□□ -1.16
CSTF3-201ENST00000323959 NUCB1Q02818 461 aa7.82□□□□□ -1.16
CSTF3-201ENST00000323959 MTX1Q13505 466 aa7.82□□□□□ -1.16
CSTF3-201ENST00000323959 TSHZ1Q6ZSZ6 1077 aa7.82□□□□□ -1.16
CSTF3-201ENST00000323959 ZNF687Q8N1G0 1237 aa7.82□□□□□ -1.16
CSTF3-201ENST00000323959 LINC01599Q8WXQ3 324 aa7.82□□□□□ -1.16
CSTF3-201ENST00000323959 TCP11L1Q9NUJ3 509 aa7.82□□□□□ -1.16
CSTF3-201ENST00000323959 TNNQ9UQP3 1299 aa7.82□□□□□ -1.16
CSTF3-201ENST00000323959 GNAI3P08754 354 aa7.82□□□□□ -1.16
CSTF3-201ENST00000323959 CTSHP09668 335 aa7.82□□□□□ -1.16
CSTF3-201ENST00000323959 LAMP2P13473 410 aa7.82□□□□□ -1.16
CSTF3-201ENST00000323959 C6P13671 934 aa7.82□□□□□ -1.16
CSTF3-201ENST00000323959 LPIN1Q14693 890 aa7.82□□□□□ -1.16
CSTF3-201ENST00000323959 SPEM1Q8N4L4 309 aa7.82□□□□□ -1.16
CSTF3-201ENST00000323959 CHCHD4Q8N4Q1 142 aa7.82□□□□□ -1.16
CSTF3-201ENST00000323959 SPG21Q9NZD8 308 aa7.82□□□□□ -1.16
CSTF3-201ENST00000323959 DPP7Q9UHL4 492 aa7.82□□□□□ -1.16
CSTF3-201ENST00000323959 C2CD3Q4AC94 2353 aa7.81□□□□□ -1.16
CSTF3-201ENST00000323959 AKR1B1P15121 316 aa7.81□□□□□ -1.16
CSTF3-201ENST00000323959 EPCAMP16422 314 aa7.81□□□□□ -1.16
CSTF3-201ENST00000323959 SARSP49591 514 aaKnown RBP7.81□□□□□ -1.16
CSTF3-201ENST00000323959 SIM1P81133 766 aaPredicted RBP7.81□□□□□ -1.16
CSTF3-201ENST00000323959 MAPK8IP2Q13387 824 aaPredicted RBP7.81□□□□□ -1.16
CSTF3-201ENST00000323959 TPRG1Q6ZUI0 275 aa7.81□□□□□ -1.16
CSTF3-201ENST00000323959 ITPRIPQ8IWB1 547 aa7.81□□□□□ -1.16
CSTF3-201ENST00000323959 PPTC7Q8NI37 304 aa7.81□□□□□ -1.16
CSTF3-201ENST00000323959 XAGE2Q96GT9 111 aa7.81□□□□□ -1.16
CSTF3-201ENST00000323959 ZNF558Q96NG5 402 aa7.81□□□□□ -1.16
CSTF3-201ENST00000323959 BACH2Q9BYV9 841 aa7.81□□□□□ -1.16
CSTF3-201ENST00000323959 MAF1Q9H063 256 aa7.81□□□□□ -1.16
CSTF3-201ENST00000323959 DCTPP1Q9H773 170 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms