RNA–Protein interactions for RNA: ENST00000318842.11

RPGR-201, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPGR, Length 3,108 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-201ENST00000318842 ALG3Q92685 438 aa10.49□□□□□ -0.73
RPGR-201ENST00000318842 RNF25Q96BH1 459 aaPredicted RBP10.49□□□□□ -0.73
RPGR-201ENST00000318842 P2RX7Q99572 595 aaKnown RBP10.49□□□□□ -0.73
RPGR-201ENST00000318842 DDX23Q9BUQ8 820 aaKnown RBP10.49□□□□□ -0.73
RPGR-201ENST00000318842 NAGPAQ9UK23 515 aa10.49□□□□□ -0.73
RPGR-201ENST00000318842 CEP83Q9Y592 693 aa10.49□□□□□ -0.73
RPGR-201ENST00000318842 PCDHAC2Q9Y5I4 1007 aa10.49□□□□□ -0.73
RPGR-201ENST00000318842 EME2A4GXA9 379 aaPredicted RBP10.49□□□□□ -0.73
RPGR-201ENST00000318842 MPHOSPH10O00566 681 aaKnown RBP10.49□□□□□ -0.73
RPGR-201ENST00000318842 DDX3XO00571 662 aaKnown RBP eCLIP10.49□□□□□ -0.73
RPGR-201ENST00000318842 CHUKO15111 745 aa10.49□□□□□ -0.73
RPGR-201ENST00000318842 PJA2O43164 708 aa10.49□□□□□ -0.73
RPGR-201ENST00000318842 DRD4P21917 467 aa10.49□□□□□ -0.73
RPGR-201ENST00000318842 GBP2P32456 591 aaPredicted RBP10.49□□□□□ -0.73
RPGR-201ENST00000318842 HOXD13P35453 343 aa10.49□□□□□ -0.73
RPGR-201ENST00000318842 RPS8P62241 208 aaKnown RBP10.49□□□□□ -0.73
RPGR-201ENST00000318842 TNNC1P63316 161 aa10.49□□□□□ -0.73
RPGR-201ENST00000318842 SNX1Q13596 522 aa10.49□□□□□ -0.73
RPGR-201ENST00000318842 SLC29A2Q14542 456 aa10.49□□□□□ -0.73
RPGR-201ENST00000318842 PPP2R5BQ15173 497 aa10.49□□□□□ -0.73
RPGR-201ENST00000318842 ZNF572Q7Z3I7 529 aaPredicted RBP10.49□□□□□ -0.73
RPGR-201ENST00000318842 SFR1Q86XK3 245 aa10.49□□□□□ -0.73
RPGR-201ENST00000318842 ZDHHC14Q8IZN3 488 aa10.49□□□□□ -0.73
RPGR-201ENST00000318842 MTMR9Q96QG7 549 aa10.49□□□□□ -0.73
RPGR-201ENST00000318842 GANQ9H2C0 597 aa10.49□□□□□ -0.73
RPGR-201ENST00000318842 C6orf50Q9HD87 102 aa10.49□□□□□ -0.73
RPGR-201ENST00000318842 CEP72Q9P209 647 aa10.49□□□□□ -0.73
RPGR-201ENST00000318842 BCL9O00512 1426 aa10.48□□□□□ -0.73
RPGR-201ENST00000318842 PARP4Q9UKK3 1724 aaKnown RBP10.48□□□□□ -0.73
RPGR-201ENST00000318842 MYH7BA7E2Y1 1941 aa10.48□□□□□ -0.73
RPGR-201ENST00000318842 F8VZ95 297 aa10.48□□□□□ -0.73
RPGR-201ENST00000318842 LDHBP07195 334 aaKnown RBP10.48□□□□□ -0.73
RPGR-201ENST00000318842 USP8P40818 1118 aa10.48□□□□□ -0.73
RPGR-201ENST00000318842 BTDP43251 543 aa10.48□□□□□ -0.73
RPGR-201ENST00000318842 SMTNP53814 917 aa10.48□□□□□ -0.73
RPGR-201ENST00000318842 FKBP3Q00688 224 aaKnown RBP10.48□□□□□ -0.73
RPGR-201ENST00000318842 LONRF1Q17RB8 773 aa10.48□□□□□ -0.73
RPGR-201ENST00000318842 USH1GQ495M9 461 aa10.48□□□□□ -0.73
RPGR-201ENST00000318842 ARSHQ5FYA8 562 aa10.48□□□□□ -0.73
RPGR-201ENST00000318842 MSL1Q68DK7 614 aa10.48□□□□□ -0.73
RPGR-201ENST00000318842 DPP8Q6V1X1 898 aaPredicted RBP10.48□□□□□ -0.73
RPGR-201ENST00000318842 NSMFQ6X4W1 530 aa10.48□□□□□ -0.73
RPGR-201ENST00000318842 CAPN12Q6ZSI9 719 aa10.48□□□□□ -0.73
RPGR-201ENST00000318842 FAM47EQ6ZV65 393 aa10.48□□□□□ -0.73
RPGR-201ENST00000318842 FBXO33Q7Z6M2 555 aa10.48□□□□□ -0.73
RPGR-201ENST00000318842 GUF1Q8N442 669 aaKnown RBP10.48□□□□□ -0.73
RPGR-201ENST00000318842 ZSWIM2Q8NEG5 633 aa10.48□□□□□ -0.73
RPGR-201ENST00000318842 ATP8B4Q8TF62 1192 aa10.48□□□□□ -0.73
RPGR-201ENST00000318842 ISCUQ9H1K1 167 aa10.48□□□□□ -0.73
RPGR-201ENST00000318842 EMILIN3Q9NT22 766 aa10.48□□□□□ -0.73
RPGR-201ENST00000318842 RGL1Q9NZL6 768 aa10.48□□□□□ -0.73
RPGR-201ENST00000318842 DDX25Q9UHL0 483 aaKnown RBP10.48□□□□□ -0.73
RPGR-201ENST00000318842 PCDHGC5Q9Y5F6 944 aa10.48□□□□□ -0.73
RPGR-201ENST00000318842 DOCK2Q92608 1830 aa10.48□□□□□ -0.73
RPGR-201ENST00000318842 HMGB1P1B2RPK0 211 aaPredicted RBP10.48□□□□□ -0.73
RPGR-201ENST00000318842 ERVV-1B6SEH8 477 aa10.48□□□□□ -0.73
RPGR-201ENST00000318842 ACSL3O95573 720 aa10.48□□□□□ -0.73
RPGR-201ENST00000318842 AKR1B1P15121 316 aa10.48□□□□□ -0.73
RPGR-201ENST00000318842 GALCP54803 685 aa10.48□□□□□ -0.73
RPGR-201ENST00000318842 ELF3P78545 371 aaPredicted RBP10.48□□□□□ -0.73
RPGR-201ENST00000318842 CDK17Q00537 523 aa10.48□□□□□ -0.73
RPGR-201ENST00000318842 AMPD3Q01432 767 aa10.48□□□□□ -0.73
RPGR-201ENST00000318842 LLGL2Q6P1M3 1020 aa10.48□□□□□ -0.73
RPGR-201ENST00000318842 ZNF662Q6ZS27 426 aa10.48□□□□□ -0.73
RPGR-201ENST00000318842 LRRC57Q8N9N7 239 aa10.48□□□□□ -0.73
RPGR-201ENST00000318842 TPCN2Q8NHX9 752 aa10.48□□□□□ -0.73
RPGR-201ENST00000318842 SLC20A1Q8WUM9 679 aa10.48□□□□□ -0.73
RPGR-201ENST00000318842 NSMCE1Q8WV22 266 aa10.48□□□□□ -0.73
RPGR-201ENST00000318842 CRAMP1Q96RY5 1269 aa10.48□□□□□ -0.73
RPGR-201ENST00000318842 TSG101Q99816 390 aa10.48□□□□□ -0.73
RPGR-201ENST00000318842 EPB41L4BQ9H329 900 aa10.48□□□□□ -0.73
RPGR-201ENST00000318842 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.48□□□□□ -0.734e-9■■■■□ 22.8
RPGR-201ENST00000318842 ENO4A6NNW6 628 aa10.47□□□□□ -0.73
RPGR-201ENST00000318842 PGRMC1O00264 195 aaKnown RBP10.47□□□□□ -0.73
RPGR-201ENST00000318842 PLA2G4BP0C869 781 aa10.47□□□□□ -0.73
RPGR-201ENST00000318842 PRLRP16471 622 aa10.47□□□□□ -0.73
RPGR-201ENST00000318842 PON1P27169 355 aa10.47□□□□□ -0.73
RPGR-201ENST00000318842 HOXA13P31271 388 aaPredicted RBP10.47□□□□□ -0.73
RPGR-201ENST00000318842 ZCWPW2Q504Y3 356 aa10.47□□□□□ -0.73
RPGR-201ENST00000318842 EAPPQ56P03 285 aaPredicted RBP10.47□□□□□ -0.73
RPGR-201ENST00000318842 FIGNQ5HY92 759 aa10.47□□□□□ -0.73
RPGR-201ENST00000318842 LNX1Q8TBB1 728 aaPredicted RBP10.47□□□□□ -0.73
RPGR-201ENST00000318842 THAP2Q9H0W7 228 aa10.47□□□□□ -0.73
RPGR-201ENST00000318842 NOD2Q9HC29 1040 aa10.47□□□□□ -0.73
RPGR-201ENST00000318842 PLCB1Q9NQ66 1216 aa10.47□□□□□ -0.73
RPGR-201ENST00000318842 USP40Q9NVE5 1235 aa10.47□□□□□ -0.73
RPGR-201ENST00000318842 FGFR1OP2Q9NVK5 253 aa10.47□□□□□ -0.73
RPGR-201ENST00000318842 PKD2L1Q9P0L9 805 aa10.47□□□□□ -0.73
RPGR-201ENST00000318842 UBAP1LF5GYI3 381 aa10.47□□□□□ -0.73
RPGR-201ENST00000318842 NEDD9Q14511 834 aa10.47□□□□□ -0.73
RPGR-201ENST00000318842 KRT25Q7Z3Z0 450 aa10.47□□□□□ -0.73
RPGR-201ENST00000318842 RPAINQ86UA6 219 aa10.47□□□□□ -0.73
RPGR-201ENST00000318842 TRIM59Q8IWR1 403 aa10.47□□□□□ -0.73
RPGR-201ENST00000318842 TATDN2Q93075 761 aa10.47□□□□□ -0.73
RPGR-201ENST00000318842 PSMD1Q99460 953 aa10.47□□□□□ -0.73
RPGR-201ENST00000318842 RUSC1Q9BVN2 902 aa10.47□□□□□ -0.73
RPGR-201ENST00000318842 ATP8A2Q9NTI2 1148 aa10.47□□□□□ -0.73
RPGR-201ENST00000318842 BSDC1Q9NW68 430 aaPredicted RBP10.47□□□□□ -0.73
RPGR-201ENST00000318842 GCNT4Q9P109 453 aa10.47□□□□□ -0.73
RPGR-201ENST00000318842 COG5Q9UP83 839 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms