RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 CNBD1Q8NA66 436 aa19.61■□□□□ 0.73
SPSB4-201ENST00000310546 MTA3Q9BTC8 594 aa19.61■□□□□ 0.73
SPSB4-201ENST00000310546 NSRP1Q9H0G5 558 aaKnown RBP19.61■□□□□ 0.73
SPSB4-201ENST00000310546 PNMA3Q9UL41 463 aa19.61■□□□□ 0.73
SPSB4-201ENST00000310546 RGS16O15492 202 aaPredicted RBP19.6■□□□□ 0.73
SPSB4-201ENST00000310546 MMP13P45452 471 aa19.6■□□□□ 0.73
SPSB4-201ENST00000310546 SLCO1A2P46721 670 aa19.6■□□□□ 0.73
SPSB4-201ENST00000310546 COPS2P61201 443 aa19.6■□□□□ 0.73
SPSB4-201ENST00000310546 KLHL30Q0D2K2 578 aa19.6■□□□□ 0.73
SPSB4-201ENST00000310546 KCNMA1Q12791 1236 aa19.6■□□□□ 0.73
SPSB4-201ENST00000310546 CABP7Q86V35 215 aa19.6■□□□□ 0.73
SPSB4-201ENST00000310546 FAM133AQ8N9E0 248 aa19.6■□□□□ 0.73
SPSB4-201ENST00000310546 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.6■□□□□ 0.73
SPSB4-201ENST00000310546 NUCKS1Q9H1E3 243 aaKnown RBP19.6■□□□□ 0.73
SPSB4-201ENST00000310546 KANSL2Q9H9L4 492 aa19.6■□□□□ 0.73
SPSB4-201ENST00000310546 ATP6V0A2Q9Y487 856 aa19.6■□□□□ 0.73
SPSB4-201ENST00000310546 CHD4Q14839 1912 aa19.6■□□□□ 0.73
SPSB4-201ENST00000310546 CCDC194A0A1B0GVG4 234 aa19.6■□□□□ 0.73
SPSB4-201ENST00000310546 USP11P51784 963 aa19.6■□□□□ 0.73
SPSB4-201ENST00000310546 LRRC14Q15048 493 aa19.6■□□□□ 0.73
SPSB4-201ENST00000310546 INF2Q27J81 1249 aa19.6■□□□□ 0.73
SPSB4-201ENST00000310546 CENPPQ6IPU0 288 aa19.6■□□□□ 0.73
SPSB4-201ENST00000310546 BLIDQ8IZY5 108 aa19.6■□□□□ 0.73
SPSB4-201ENST00000310546 SLC17A8Q8NDX2 589 aa19.6■□□□□ 0.73
SPSB4-201ENST00000310546 ACTRT1Q8TDG2 376 aa19.6■□□□□ 0.73
SPSB4-201ENST00000310546 DYDC1Q8WWB3 177 aa19.6■□□□□ 0.73
SPSB4-201ENST00000310546 ZCWPW1Q9H0M4 648 aa19.6■□□□□ 0.73
SPSB4-201ENST00000310546 MYH1P12882 1939 aa19.59■□□□□ 0.73
SPSB4-201ENST00000310546 MYH2Q9UKX2 1941 aa19.59■□□□□ 0.73
SPSB4-201ENST00000310546 SNX3O60493 162 aa19.59■□□□□ 0.73
SPSB4-201ENST00000310546 RTN3O95197 1032 aaPredicted RBP19.59■□□□□ 0.73
SPSB4-201ENST00000310546 GYS1P13807 737 aa19.59■□□□□ 0.73
SPSB4-201ENST00000310546 FERP16591 822 aa19.59■□□□□ 0.73
SPSB4-201ENST00000310546 GNAT2P19087 354 aa19.59■□□□□ 0.73
SPSB4-201ENST00000310546 PCK1P35558 622 aa19.59■□□□□ 0.73
SPSB4-201ENST00000310546 CWF19L1Q69YN2 538 aaKnown RBP19.59■□□□□ 0.73
SPSB4-201ENST00000310546 MGARPQ8TDB4 240 aa19.59■□□□□ 0.73
SPSB4-201ENST00000310546 ITFG2Q969R8 447 aa19.59■□□□□ 0.73
SPSB4-201ENST00000310546 PBKQ96KB5 322 aa19.59■□□□□ 0.73
SPSB4-201ENST00000310546 PIDD1Q9HB75 910 aa19.59■□□□□ 0.73
SPSB4-201ENST00000310546 TCP11L1Q9NUJ3 509 aa19.59■□□□□ 0.73
SPSB4-201ENST00000310546 SPDYE5A6NIY4 337 aa19.59■□□□□ 0.73
SPSB4-201ENST00000310546 DAAM2Q86T65 1068 aa19.59■□□□□ 0.73
SPSB4-201ENST00000310546 CCSER1Q9C0I3 900 aa19.59■□□□□ 0.73
SPSB4-201ENST00000310546 ZBTB12Q9Y330 459 aaPredicted RBP19.59■□□□□ 0.73
SPSB4-201ENST00000310546 LRRD1A4D1F6 860 aa19.58■□□□□ 0.73
SPSB4-201ENST00000310546 NMT2O60551 498 aa19.58■□□□□ 0.73
SPSB4-201ENST00000310546 SEPT2Q15019 361 aa19.58■□□□□ 0.73
SPSB4-201ENST00000310546 CCDC38Q502W7 563 aa19.58■□□□□ 0.73
SPSB4-201ENST00000310546 DYMQ7RTS9 669 aa19.58■□□□□ 0.73
SPSB4-201ENST00000310546 ADAT2Q7Z6V5 191 aaKnown RBP19.58■□□□□ 0.73
SPSB4-201ENST00000310546 ZNF526Q8TF50 670 aaPredicted RBP19.58■□□□□ 0.73
SPSB4-201ENST00000310546 FGFR1OP2Q9NVK5 253 aa19.58■□□□□ 0.73
SPSB4-201ENST00000310546 PDE6CP51160 858 aa19.58■□□□□ 0.73
SPSB4-201ENST00000310546 RBM5P52756 815 aaKnown RBP eCLIP19.58■□□□□ 0.73
SPSB4-201ENST00000310546 DENND2CQ68D51 928 aa19.58■□□□□ 0.73
SPSB4-201ENST00000310546 ADGRA1Q86SQ6 560 aa19.58■□□□□ 0.73
SPSB4-201ENST00000310546 LSM14BQ9BX40 385 aaKnown RBP19.58■□□□□ 0.73
SPSB4-201ENST00000310546 RAB17Q9H0T7 212 aa19.58■□□□□ 0.73
SPSB4-201ENST00000310546 BSDC1Q9NW68 430 aaPredicted RBP19.58■□□□□ 0.73
SPSB4-201ENST00000310546 USP15Q9Y4E8 981 aaPredicted RBP19.58■□□□□ 0.73
SPSB4-201ENST00000310546 MAP3K13O43283 966 aa19.58■□□□□ 0.72
SPSB4-201ENST00000310546 HIP1RO75146 1068 aa19.58■□□□□ 0.72
SPSB4-201ENST00000310546 ZNF131P52739 623 aa19.58■□□□□ 0.72
SPSB4-201ENST00000310546 PDCD2Q16342 344 aaPredicted RBP19.58■□□□□ 0.72
SPSB4-201ENST00000310546 IFT74Q96LB3 600 aa19.58■□□□□ 0.72
SPSB4-201ENST00000310546 ZMYND12Q9H0C1 365 aa19.58■□□□□ 0.72
SPSB4-201ENST00000310546 CEP72Q9P209 647 aa19.58■□□□□ 0.72
SPSB4-201ENST00000310546 LY75O60449 1722 aa19.58■□□□□ 0.72
SPSB4-201ENST00000310546 TNS1Q9HBL0 1735 aaKnown RBP19.57■□□□□ 0.72
SPSB4-201ENST00000310546 TUBP50607 506 aa19.57■□□□□ 0.72
SPSB4-201ENST00000310546 SF3B3Q15393 1217 aaKnown RBP19.57■□□□□ 0.72
SPSB4-201ENST00000310546 PRR5LQ6MZQ0 368 aa19.57■□□□□ 0.72
SPSB4-201ENST00000310546 FAM84BQ96KN1 310 aaPredicted RBP19.57■□□□□ 0.72
SPSB4-201ENST00000310546 FAM114A2Q9NRY5 505 aa19.57■□□□□ 0.72
SPSB4-201ENST00000310546 ZMYND8Q9ULU4 1186 aaPredicted RBP19.57■□□□□ 0.72
SPSB4-201ENST00000310546 SCN7AQ01118 1682 aa19.57■□□□□ 0.72
SPSB4-201ENST00000310546 SPDYE3A6NKU9 549 aa19.57■□□□□ 0.72
SPSB4-201ENST00000310546 CCDC169A6NNP5 214 aa19.57■□□□□ 0.72
SPSB4-201ENST00000310546 NOL4O94818 638 aa19.57■□□□□ 0.72
SPSB4-201ENST00000310546 SERPINB2P05120 415 aa19.57■□□□□ 0.72
SPSB4-201ENST00000310546 ROR2Q01974 943 aaKnown RBP19.57■□□□□ 0.72
SPSB4-201ENST00000310546 LAMB3Q13751 1172 aa19.57■□□□□ 0.72
SPSB4-201ENST00000310546 LRRC41Q15345 812 aa19.57■□□□□ 0.72
SPSB4-201ENST00000310546 PFKFB3Q16875 520 aaPredicted RBP19.57■□□□□ 0.72
SPSB4-201ENST00000310546 MFN1Q8IWA4 741 aa19.57■□□□□ 0.72
SPSB4-201ENST00000310546 TEKT4Q8WW24 435 aa19.57■□□□□ 0.72
SPSB4-201ENST00000310546 CCDC188H7C350 402 aa19.56■□□□□ 0.72
SPSB4-201ENST00000310546 PPFIA2O75334 1257 aa19.56■□□□□ 0.72
SPSB4-201ENST00000310546 CALM1P0DP23 149 aa19.56■□□□□ 0.72
SPSB4-201ENST00000310546 CALM2P0DP24 149 aa19.56■□□□□ 0.72
SPSB4-201ENST00000310546 CALM3P0DP25 149 aa19.56■□□□□ 0.72
SPSB4-201ENST00000310546 TM4SF1P30408 202 aa19.56■□□□□ 0.72
SPSB4-201ENST00000310546 PPP1R2P41236 205 aa19.56■□□□□ 0.72
SPSB4-201ENST00000310546 PLTPP55058 493 aa19.56■□□□□ 0.72
SPSB4-201ENST00000310546 BNIP1Q12981 228 aa19.56■□□□□ 0.72
SPSB4-201ENST00000310546 SLC29A2Q14542 456 aa19.56■□□□□ 0.72
SPSB4-201ENST00000310546 SLC5A9Q2M3M2 681 aa19.56■□□□□ 0.72
SPSB4-201ENST00000310546 ANO7Q6IWH7 933 aa19.56■□□□□ 0.72
SPSB4-201ENST00000310546 PEX26Q7Z412 305 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms