RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 KLHL14Q9P2G3 628 aa3.43□□□□□ -1.86
CLOCK-201ENST00000309964 CTNND2Q9UQB3 1225 aa3.43□□□□□ -1.86
CLOCK-201ENST00000309964 MADDQ8WXG6 1647 aa3.43□□□□□ -1.86
CLOCK-201ENST00000309964 PNMA6EA0A0J9YXQ4 647 aa3.43□□□□□ -1.86
CLOCK-201ENST00000309964 ZNF197O14709 1029 aa3.43□□□□□ -1.86
CLOCK-201ENST00000309964 RAD17O75943 681 aa3.43□□□□□ -1.86
CLOCK-201ENST00000309964 GNRH1P01148 92 aa3.43□□□□□ -1.86
CLOCK-201ENST00000309964 MYBL1P10243 752 aa3.43□□□□□ -1.86
CLOCK-201ENST00000309964 STX1BP61266 288 aa3.43□□□□□ -1.86
CLOCK-201ENST00000309964 CYP4A11Q02928 519 aa3.43□□□□□ -1.86
CLOCK-201ENST00000309964 THOC5Q13769 683 aaKnown RBP3.43□□□□□ -1.86
CLOCK-201ENST00000309964 PRKG1Q13976 671 aa3.43□□□□□ -1.86
CLOCK-201ENST00000309964 SF3B3Q15393 1217 aaKnown RBP3.43□□□□□ -1.86
CLOCK-201ENST00000309964 TXNRD1Q16881 649 aa3.43□□□□□ -1.86
CLOCK-201ENST00000309964 BTBD8Q5XKL5 378 aa3.43□□□□□ -1.86
CLOCK-201ENST00000309964 C4orf50Q6ZRC1 276 aa3.43□□□□□ -1.86
CLOCK-201ENST00000309964 FAM83AQ86UY5 434 aa3.43□□□□□ -1.86
CLOCK-201ENST00000309964 DNAAF3Q8N9W5 541 aa3.43□□□□□ -1.86
CLOCK-201ENST00000309964 FAM71BQ8TC56 605 aa3.43□□□□□ -1.86
CLOCK-201ENST00000309964 VPS50Q96JG6 964 aa3.43□□□□□ -1.86
CLOCK-201ENST00000309964 RILPQ96NA2 401 aa3.43□□□□□ -1.86
CLOCK-201ENST00000309964 DNAJC17Q9NVM6 304 aaKnown RBP3.43□□□□□ -1.86
CLOCK-201ENST00000309964 PTPRUQ92729 1446 aa3.43□□□□□ -1.86
CLOCK-201ENST00000309964 KNTC1P50748 2209 aa3.43□□□□□ -1.86
CLOCK-201ENST00000309964 GFPT2O94808 682 aa3.43□□□□□ -1.86
CLOCK-201ENST00000309964 RGS2P41220 211 aa3.43□□□□□ -1.86
CLOCK-201ENST00000309964 CDK8P49336 464 aa3.43□□□□□ -1.86
CLOCK-201ENST00000309964 DGKDQ16760 1214 aa3.43□□□□□ -1.86
CLOCK-201ENST00000309964 HSP90AA5PQ58FG0 334 aa3.43□□□□□ -1.86
CLOCK-201ENST00000309964 ITPRIPL1Q6GPH6 555 aa3.43□□□□□ -1.86
CLOCK-201ENST00000309964 SEPT14Q6ZU15 432 aa3.43□□□□□ -1.86
CLOCK-201ENST00000309964 CEP120Q8N960 986 aa3.43□□□□□ -1.86
CLOCK-201ENST00000309964 XXYLT1Q8NBI6 393 aa3.43□□□□□ -1.86
CLOCK-201ENST00000309964 TTLL11Q8NHH1 800 aa3.43□□□□□ -1.86
CLOCK-201ENST00000309964 DDX27Q96GQ7 796 aaKnown RBP3.43□□□□□ -1.86
CLOCK-201ENST00000309964 FSD1LQ9BXM9 530 aa3.43□□□□□ -1.86
CLOCK-201ENST00000309964 DBNDD1Q9H9R9 158 aa3.43□□□□□ -1.86
CLOCK-201ENST00000309964 ASNSD1Q9NWL6 643 aa3.43□□□□□ -1.86
CLOCK-201ENST00000309964 NDE1Q9NXR1 346 aa3.43□□□□□ -1.86
CLOCK-201ENST00000309964 ZNF148Q9UQR1 794 aa3.43□□□□□ -1.86
CLOCK-201ENST00000309964 PCDHB4Q9Y5E5 795 aa3.43□□□□□ -1.86
CLOCK-201ENST00000309964 KCNJ18B7U540 433 aa3.42□□□□□ -1.86
CLOCK-201ENST00000309964 GGPS1O95749 300 aa3.42□□□□□ -1.86
CLOCK-201ENST00000309964 MAPK4P31152 587 aa3.42□□□□□ -1.86
CLOCK-201ENST00000309964 GJC1P36383 396 aa3.42□□□□□ -1.86
CLOCK-201ENST00000309964 RFC5P40937 340 aa3.42□□□□□ -1.86
CLOCK-201ENST00000309964 TFAMQ00059 246 aaKnown RBP3.42□□□□□ -1.86
CLOCK-201ENST00000309964 BFSP2Q13515 415 aa3.42□□□□□ -1.86
CLOCK-201ENST00000309964 KCNJ12Q14500 433 aa3.42□□□□□ -1.86
CLOCK-201ENST00000309964 PHLDB3Q6NSJ2 640 aa3.42□□□□□ -1.86
CLOCK-201ENST00000309964 DNAJC24Q6P3W2 148 aa3.42□□□□□ -1.86
CLOCK-201ENST00000309964 TSPYL6Q8N831 410 aa3.42□□□□□ -1.86
CLOCK-201ENST00000309964 RSRC1Q96IZ7 334 aaKnown RBP3.42□□□□□ -1.86
CLOCK-201ENST00000309964 NLRP4Q96MN2 994 aa3.42□□□□□ -1.86
CLOCK-201ENST00000309964 GDAP1L1Q96MZ0 367 aa3.42□□□□□ -1.86
CLOCK-201ENST00000309964 SLITRK1Q96PX8 696 aa3.42□□□□□ -1.86
CLOCK-201ENST00000309964 TUBGCP2Q9BSJ2 902 aa3.42□□□□□ -1.86
CLOCK-201ENST00000309964 FRMD8Q9BZ67 464 aaPredicted RBP3.42□□□□□ -1.86
CLOCK-201ENST00000309964 TJP2Q9UDY2 1190 aa3.42□□□□□ -1.86
CLOCK-201ENST00000309964 DDX41Q9UJV9 622 aaKnown RBP3.42□□□□□ -1.86
CLOCK-201ENST00000309964 URB1O60287 2271 aaKnown RBP3.42□□□□□ -1.86
CLOCK-201ENST00000309964 NEMP1O14524 444 aa3.42□□□□□ -1.86
CLOCK-201ENST00000309964 PPP1R12AO14974 1030 aaPredicted RBP3.42□□□□□ -1.86
CLOCK-201ENST00000309964 ECE2O60344 883 aa3.42□□□□□ -1.86
CLOCK-201ENST00000309964 IGHDP01880 384 aa3.42□□□□□ -1.86
CLOCK-201ENST00000309964 NFX1Q12986 1120 aaKnown RBP3.42□□□□□ -1.86
CLOCK-201ENST00000309964 PDIA5Q14554 519 aa3.42□□□□□ -1.86
CLOCK-201ENST00000309964 TAF1CQ15572 869 aaPredicted RBP3.42□□□□□ -1.86
CLOCK-201ENST00000309964 WHAMMP3Q1A5X7 153 aa3.42□□□□□ -1.86
CLOCK-201ENST00000309964 ARHGAP15Q53QZ3 475 aa3.42□□□□□ -1.86
CLOCK-201ENST00000309964 KRBA2Q6ZNG9 492 aa3.42□□□□□ -1.86
CLOCK-201ENST00000309964 STAG2Q8N3U4 1231 aa3.42□□□□□ -1.86
CLOCK-201ENST00000309964 NKX2-3Q8TAU0 364 aa3.42□□□□□ -1.86
CLOCK-201ENST00000309964 FAM149B1Q96BN6 582 aa3.42□□□□□ -1.86
CLOCK-201ENST00000309964 TRERF1Q96PN7 1200 aa3.42□□□□□ -1.86
CLOCK-201ENST00000309964 MED15Q96RN5 788 aa3.42□□□□□ -1.86
CLOCK-201ENST00000309964 SERPINI1Q99574 410 aa3.42□□□□□ -1.86
CLOCK-201ENST00000309964 NDEL1Q9GZM8 345 aa3.42□□□□□ -1.86
CLOCK-201ENST00000309964 JPH1Q9HDC5 661 aaPredicted RBP3.42□□□□□ -1.86
CLOCK-201ENST00000309964 KANSL3Q9P2N6 904 aa3.42□□□□□ -1.86
CLOCK-201ENST00000309964 TRIM33Q9UPN9 1127 aa3.42□□□□□ -1.86
CLOCK-201ENST00000309964 MANSC4A6NHS7 340 aaPredicted RBP3.42□□□□□ -1.86
CLOCK-201ENST00000309964 RGS16O15492 202 aaPredicted RBP3.42□□□□□ -1.86
CLOCK-201ENST00000309964 RPN1P04843 607 aaKnown RBP3.42□□□□□ -1.86
CLOCK-201ENST00000309964 ACADSBP45954 432 aa3.42□□□□□ -1.86
CLOCK-201ENST00000309964 SCNN1DP51172 638 aa3.42□□□□□ -1.86
CLOCK-201ENST00000309964 GEMIN4P57678 1058 aaKnown RBP3.42□□□□□ -1.86
CLOCK-201ENST00000309964 PSMC5P62195 406 aa3.42□□□□□ -1.86
CLOCK-201ENST00000309964 XKR3Q5GH77 459 aa3.42□□□□□ -1.86
CLOCK-201ENST00000309964 GKAP1Q5VSY0 366 aaPredicted RBP3.42□□□□□ -1.86
CLOCK-201ENST00000309964 SCYL2Q6P3W7 929 aa3.42□□□□□ -1.86
CLOCK-201ENST00000309964 ERO1BQ86YB8 467 aa3.42□□□□□ -1.86
CLOCK-201ENST00000309964 NT5DC4Q86YG4 428 aa3.42□□□□□ -1.86
CLOCK-201ENST00000309964 RNF10Q8N5U6 811 aaKnown RBP3.42□□□□□ -1.86
CLOCK-201ENST00000309964 RUBCNQ92622 972 aa3.42□□□□□ -1.86
CLOCK-201ENST00000309964 PHKBQ93100 1093 aa3.42□□□□□ -1.86
CLOCK-201ENST00000309964 TMEM169Q96HH4 297 aa3.42□□□□□ -1.86
CLOCK-201ENST00000309964 LARP6Q9BRS8 491 aaKnown RBP3.42□□□□□ -1.86
CLOCK-201ENST00000309964 LZTFL1Q9NQ48 299 aa3.42□□□□□ -1.86
CLOCK-201ENST00000309964 PKD2L1Q9P0L9 805 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms