RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.08□□□□□ -0.8
PTPRE-202ENST00000306042 TAF6LQ9Y6J9 622 aa10.08□□□□□ -0.8
PTPRE-202ENST00000306042 TYW5A2RUC4 315 aaKnown RBP10.08□□□□□ -0.8
PTPRE-202ENST00000306042 CCDC85CA6NKD9 419 aa10.08□□□□□ -0.8
PTPRE-202ENST00000306042 KPNA6O60684 536 aa10.08□□□□□ -0.8
PTPRE-202ENST00000306042 CAPN15O75808 1086 aa10.08□□□□□ -0.8
PTPRE-202ENST00000306042 GAS8O95995 478 aa10.08□□□□□ -0.8
PTPRE-202ENST00000306042 BFSP2Q13515 415 aa10.08□□□□□ -0.8
PTPRE-202ENST00000306042 SH2D3AQ9BRG2 576 aa10.08□□□□□ -0.8
PTPRE-202ENST00000306042 WDR18Q9BV38 432 aa10.08□□□□□ -0.8
PTPRE-202ENST00000306042 IL25Q9H293 177 aa10.08□□□□□ -0.8
PTPRE-202ENST00000306042 IKBKGQ9Y6K9 419 aa10.08□□□□□ -0.8
PTPRE-202ENST00000306042 TOPAZ1Q8N9V7 1692 aa10.08□□□□□ -0.8
PTPRE-202ENST00000306042 FZD9O00144 591 aa10.08□□□□□ -0.8
PTPRE-202ENST00000306042 HUS1O60921 280 aa10.08□□□□□ -0.8
PTPRE-202ENST00000306042 ERCC5P28715 1186 aaPredicted RBP10.08□□□□□ -0.8
PTPRE-202ENST00000306042 RFC5P40937 340 aa10.08□□□□□ -0.8
PTPRE-202ENST00000306042 MAGEA1P43355 309 aa10.08□□□□□ -0.8
PTPRE-202ENST00000306042 ATP2C1P98194 919 aaPredicted RBP10.08□□□□□ -0.8
PTPRE-202ENST00000306042 MAP9Q49MG5 647 aa10.08□□□□□ -0.8
PTPRE-202ENST00000306042 ZNF667Q5HYK9 610 aa10.08□□□□□ -0.8
PTPRE-202ENST00000306042 ELMOD1Q8N336 334 aa10.08□□□□□ -0.8
PTPRE-202ENST00000306042 OR6B3Q8NGW1 331 aa10.08□□□□□ -0.8
PTPRE-202ENST00000306042 ZNF830Q96NB3 372 aaPredicted RBP10.08□□□□□ -0.8
PTPRE-202ENST00000306042 TUBGCP2Q9BSJ2 902 aa10.08□□□□□ -0.8
PTPRE-202ENST00000306042 RGS17Q9UGC6 210 aaPredicted RBP10.08□□□□□ -0.8
PTPRE-202ENST00000306042 NOC2LQ9Y3T9 749 aaKnown RBP10.08□□□□□ -0.8
PTPRE-202ENST00000306042 ASAP2O43150 1006 aa10.07□□□□□ -0.8
PTPRE-202ENST00000306042 HOXC6P09630 235 aa10.07□□□□□ -0.8
PTPRE-202ENST00000306042 CCNE1P24864 410 aa10.07□□□□□ -0.8
PTPRE-202ENST00000306042 RNASE9P60153 205 aaKnown RBP10.07□□□□□ -0.8
PTPRE-202ENST00000306042 FSTL1Q12841 308 aa10.07□□□□□ -0.8
PTPRE-202ENST00000306042 SCYL2Q6P3W7 929 aa10.07□□□□□ -0.8
PTPRE-202ENST00000306042 CATSPERGQ6ZRH7 1159 aa10.07□□□□□ -0.8
PTPRE-202ENST00000306042 XXYLT1Q8NBI6 393 aa10.07□□□□□ -0.8
PTPRE-202ENST00000306042 TMEM143Q96AN5 459 aa10.07□□□□□ -0.8
PTPRE-202ENST00000306042 LRRC4Q9HBW1 653 aa10.07□□□□□ -0.8
PTPRE-202ENST00000306042 XPNPEP3Q9NQH7 507 aa10.07□□□□□ -0.8
PTPRE-202ENST00000306042 CARNS1A5YM72 827 aa10.07□□□□□ -0.8
PTPRE-202ENST00000306042 PP2D1A8MPX8 630 aa10.07□□□□□ -0.8
PTPRE-202ENST00000306042 ATP2A1O14983 1001 aa10.07□□□□□ -0.8
PTPRE-202ENST00000306042 COBLO75128 1261 aa10.07□□□□□ -0.8
PTPRE-202ENST00000306042 PRKCBP05771 671 aa10.07□□□□□ -0.8
PTPRE-202ENST00000306042 THPOP40225 353 aa10.07□□□□□ -0.8
PTPRE-202ENST00000306042 ACTR2P61160 394 aa10.07□□□□□ -0.8
PTPRE-202ENST00000306042 MRPS9P82933 396 aaKnown RBP10.07□□□□□ -0.8
PTPRE-202ENST00000306042 U2AF1L4Q8WU68 220 aaKnown RBP10.07□□□□□ -0.8
PTPRE-202ENST00000306042 CCDC113Q9H0I3 377 aa10.07□□□□□ -0.8
PTPRE-202ENST00000306042 PIDD1Q9HB75 910 aa10.07□□□□□ -0.8
PTPRE-202ENST00000306042 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.07□□□□□ -0.8
PTPRE-202ENST00000306042 SYNPO2Q9UMS6 1093 aa10.07□□□□□ -0.8
PTPRE-202ENST00000306042 HIP1RO75146 1068 aa10.07□□□□□ -0.8
PTPRE-202ENST00000306042 STK10O94804 968 aaKnown RBP10.07□□□□□ -0.8
PTPRE-202ENST00000306042 ZBTB48P10074 688 aaPredicted RBP10.07□□□□□ -0.8
PTPRE-202ENST00000306042 NSFP46459 744 aaKnown RBP10.07□□□□□ -0.8
PTPRE-202ENST00000306042 PRMT2P55345 433 aa10.07□□□□□ -0.8
PTPRE-202ENST00000306042 RDM1Q8NG50 284 aa10.07□□□□□ -0.8
PTPRE-202ENST00000306042 SYTL5Q8TDW5 730 aaPredicted RBP10.07□□□□□ -0.8
PTPRE-202ENST00000306042 CCDC114Q96M63 670 aa10.07□□□□□ -0.8
PTPRE-202ENST00000306042 FAM213AQ9BRX8 229 aa10.07□□□□□ -0.8
PTPRE-202ENST00000306042 TIPINQ9BVW5 301 aa10.07□□□□□ -0.8
PTPRE-202ENST00000306042 FANCLQ9NW38 375 aa10.07□□□□□ -0.8
PTPRE-202ENST00000306042 SPDYE5A6NIY4 337 aa10.07□□□□□ -0.8
PTPRE-202ENST00000306042 CD58P19256 250 aa10.07□□□□□ -0.8
PTPRE-202ENST00000306042 TSPY1Q01534 308 aa10.07□□□□□ -0.8
PTPRE-202ENST00000306042 CFAP58Q5T655 872 aa10.07□□□□□ -0.8
PTPRE-202ENST00000306042 RESP18Q5W5W9 173 aa10.07□□□□□ -0.8
PTPRE-202ENST00000306042 TYW1BQ6NUM6 668 aa10.07□□□□□ -0.8
PTPRE-202ENST00000306042 ZNF746Q6NUN9 644 aaPredicted RBP10.07□□□□□ -0.8
PTPRE-202ENST00000306042 EFCAB12Q6NXP0 572 aa10.07□□□□□ -0.8
PTPRE-202ENST00000306042 SCARA5Q6ZMJ2 495 aa10.07□□□□□ -0.8
PTPRE-202ENST00000306042 INTS8Q75QN2 995 aaKnown RBP10.07□□□□□ -0.8
PTPRE-202ENST00000306042 UBL4BQ8N7F7 174 aa10.07□□□□□ -0.8
PTPRE-202ENST00000306042 TSNARE1Q96NA8 513 aa10.07□□□□□ -0.8
PTPRE-202ENST00000306042 LTBP3Q9NS15 1303 aa10.07□□□□□ -0.8
PTPRE-202ENST00000306042 PHRF1Q9P1Y6 1649 aaKnown RBP10.07□□□□□ -0.8
PTPRE-202ENST00000306042 CTAGE9A4FU28 777 aa10.06□□□□□ -0.8
PTPRE-202ENST00000306042 TBC1D8O95759 1140 aa10.06□□□□□ -0.8
PTPRE-202ENST00000306042 LRRC63Q05C16 580 aa10.06□□□□□ -0.8
PTPRE-202ENST00000306042 PAK2Q13177 524 aa10.06□□□□□ -0.8
PTPRE-202ENST00000306042 KYAT1Q16773 422 aa10.06□□□□□ -0.8
PTPRE-202ENST00000306042 SPECC1LQ69YQ0 1117 aa10.06□□□□□ -0.8
PTPRE-202ENST00000306042 TMTC1Q8IUR5 882 aa10.06□□□□□ -0.8
PTPRE-202ENST00000306042 PPP1R9BQ96SB3 815 aa10.06□□□□□ -0.8
PTPRE-202ENST00000306042 PXMP2Q9NR77 195 aa10.06□□□□□ -0.8
PTPRE-202ENST00000306042 PVALEFA0A1B0GWK0 134 aa10.06□□□□□ -0.8
PTPRE-202ENST00000306042 FAM170AA1A519 330 aa10.06□□□□□ -0.8
PTPRE-202ENST00000306042 THAP12O43422 761 aa10.06□□□□□ -0.8
PTPRE-202ENST00000306042 MSCO60682 206 aa10.06□□□□□ -0.8
PTPRE-202ENST00000306042 EEF1GP26641 437 aaKnown RBP10.06□□□□□ -0.8
PTPRE-202ENST00000306042 GPC3P51654 580 aa10.06□□□□□ -0.8
PTPRE-202ENST00000306042 ZNF280AP59817 542 aaPredicted RBP10.06□□□□□ -0.8
PTPRE-202ENST00000306042 EMC2Q15006 297 aa10.06□□□□□ -0.8
PTPRE-202ENST00000306042 SEC23AQ15436 765 aa10.06□□□□□ -0.8
PTPRE-202ENST00000306042 HAUS6Q7Z4H7 955 aa10.06□□□□□ -0.8
PTPRE-202ENST00000306042 PDCD2LQ9BRP1 358 aa10.06□□□□□ -0.8
PTPRE-202ENST00000306042 VTA1Q9NP79 307 aa10.06□□□□□ -0.8
PTPRE-202ENST00000306042 TMEM63CQ9P1W3 806 aa10.06□□□□□ -0.8
PTPRE-202ENST00000306042 SYNJ2BP-COX16A0A087WUM0 186 aa10.06□□□□□ -0.8
PTPRE-202ENST00000306042 RAG1P15918 1043 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms