RNA–Protein interactions for RNA: ENST00000305366.7

TM4SF1-201, Transcript of transmembrane 4 L six family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM4SF1, Length 1,771 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-201ENST00000305366 CCDC178Q5BJE1 867 aa8.76□□□□□ -1.01
TM4SF1-201ENST00000305366 IFIT1BQ5T764 474 aaKnown RBP8.76□□□□□ -1.01
TM4SF1-201ENST00000305366 GDF6Q6KF10 455 aaPredicted RBP8.76□□□□□ -1.01
TM4SF1-201ENST00000305366 FAM117BQ6P1L5 589 aa8.76□□□□□ -1.01
TM4SF1-201ENST00000305366 CATIPQ7Z7H3 387 aa8.76□□□□□ -1.01
TM4SF1-201ENST00000305366 HOMER1Q86YM7 354 aa8.76□□□□□ -1.01
TM4SF1-201ENST00000305366 MCF2L2Q86YR7 1114 aa8.76□□□□□ -1.01
TM4SF1-201ENST00000305366 CCDC34Q96HJ3 373 aa8.76□□□□□ -1.01
TM4SF1-201ENST00000305366 PPP1R13BQ96KQ4 1090 aa8.76□□□□□ -1.01
TM4SF1-201ENST00000305366 ASB2Q96Q27 587 aa8.76□□□□□ -1.01
TM4SF1-201ENST00000305366 PHF20Q9BVI0 1012 aa8.76□□□□□ -1.01
TM4SF1-201ENST00000305366 L2HGDHQ9H9P8 463 aa8.76□□□□□ -1.01
TM4SF1-201ENST00000305366 THEGQ9P2T0 379 aa8.76□□□□□ -1.01
TM4SF1-201ENST00000305366 MRPL11Q9Y3B7 192 aaKnown RBP8.76□□□□□ -1.01
TM4SF1-201ENST00000305366 PCDHB6Q9Y5E3 794 aa8.76□□□□□ -1.01
TM4SF1-201ENST00000305366 PCDHA11Q9Y5I1 949 aa8.76□□□□□ -1.01
TM4SF1-201ENST00000305366 MYH8P13535 1937 aa8.75□□□□□ -1.01
TM4SF1-201ENST00000305366 ZNFX1Q9P2E3 1918 aaKnown RBP8.75□□□□□ -1.01
TM4SF1-201ENST00000305366 ABCB11O95342 1321 aa8.75□□□□□ -1.01
TM4SF1-201ENST00000305366 KLRF2D3W0D1 207 aa8.75□□□□□ -1.01
TM4SF1-201ENST00000305366 TNFRSF10AO00220 468 aa8.75□□□□□ -1.01
TM4SF1-201ENST00000305366 NR3C2P08235 984 aa8.75□□□□□ -1.01
TM4SF1-201ENST00000305366 ZNF286BP0CG31 522 aa8.75□□□□□ -1.01
TM4SF1-201ENST00000305366 ZNF18P17022 549 aa8.75□□□□□ -1.01
TM4SF1-201ENST00000305366 ERCC5P28715 1186 aaPredicted RBP8.75□□□□□ -1.01
TM4SF1-201ENST00000305366 KRT2P35908 639 aa8.75□□□□□ -1.01
TM4SF1-201ENST00000305366 ZNF200P98182 395 aaPredicted RBP8.75□□□□□ -1.01
TM4SF1-201ENST00000305366 TFF2Q03403 129 aa8.75□□□□□ -1.01
TM4SF1-201ENST00000305366 NR5A1Q13285 461 aa8.75□□□□□ -1.01
TM4SF1-201ENST00000305366 BFSP2Q13515 415 aa8.75□□□□□ -1.01
TM4SF1-201ENST00000305366 ISM2Q6H9L7 571 aa8.75□□□□□ -1.01
TM4SF1-201ENST00000305366 NFRKBQ6P4R8 1299 aa8.75□□□□□ -1.01
TM4SF1-201ENST00000305366 CCDC62Q6P9F0 684 aa8.75□□□□□ -1.01
TM4SF1-201ENST00000305366 C7orf31Q8N865 590 aa8.75□□□□□ -1.01
TM4SF1-201ENST00000305366 ADAMTS19Q8TE59 1207 aa8.75□□□□□ -1.01
TM4SF1-201ENST00000305366 ATXN2LQ8WWM7 1075 aaKnown RBP8.75□□□□□ -1.01
TM4SF1-201ENST00000305366 SMARCE1Q969G3 411 aa8.75□□□□□ -1.01
TM4SF1-201ENST00000305366 NECAB3Q96P71 396 aaPredicted RBP8.75□□□□□ -1.01
TM4SF1-201ENST00000305366 ZBED2Q9BTP6 218 aa8.75□□□□□ -1.01
TM4SF1-201ENST00000305366 TRMT1Q9NXH9 659 aaKnown RBP8.75□□□□□ -1.01
TM4SF1-201ENST00000305366 HDAC6Q9UBN7 1215 aa8.75□□□□□ -1.01
TM4SF1-201ENST00000305366 SERTAD1Q9UHV2 236 aa8.75□□□□□ -1.01
TM4SF1-201ENST00000305366 PRUNE2Q8WUY3 3088 aa8.74□□□□□ -1.01
TM4SF1-201ENST00000305366 PARP14Q460N5 1801 aa8.74□□□□□ -1.01
TM4SF1-201ENST00000305366 EPOPA6NHQ4 379 aa8.74□□□□□ -1.01
TM4SF1-201ENST00000305366 POLR2DO15514 142 aaKnown RBP8.74□□□□□ -1.01
TM4SF1-201ENST00000305366 ARHGEF15O94989 841 aa8.74□□□□□ -1.01
TM4SF1-201ENST00000305366 SLU7O95391 586 aaKnown RBP8.74□□□□□ -1.01
TM4SF1-201ENST00000305366 MMP3P08254 477 aa8.74□□□□□ -1.01
TM4SF1-201ENST00000305366 GRIN1Q05586 938 aa8.74□□□□□ -1.01
TM4SF1-201ENST00000305366 ARHGAP1Q07960 439 aa8.74□□□□□ -1.01
TM4SF1-201ENST00000305366 TROAPQ12815 778 aa8.74□□□□□ -1.01
TM4SF1-201ENST00000305366 TBX2Q13207 712 aaPredicted RBP8.74□□□□□ -1.01
TM4SF1-201ENST00000305366 ASPRV1Q53RT3 343 aa8.74□□□□□ -1.01
TM4SF1-201ENST00000305366 TMTC3Q6ZXV5 915 aa8.74□□□□□ -1.01
TM4SF1-201ENST00000305366 SPRED2Q7Z698 418 aa8.74□□□□□ -1.01
TM4SF1-201ENST00000305366 OXER1Q8TDS5 423 aa8.74□□□□□ -1.01
TM4SF1-201ENST00000305366 TNFRSF25Q93038 417 aa8.74□□□□□ -1.01
TM4SF1-201ENST00000305366 TSPYL2Q9H2G4 693 aaPredicted RBP8.74□□□□□ -1.01
TM4SF1-201ENST00000305366 BRMS1Q9HCU9 246 aa8.74□□□□□ -1.01
TM4SF1-201ENST00000305366 FANCLQ9NW38 375 aa8.74□□□□□ -1.01
TM4SF1-201ENST00000305366 MTUS1Q9ULD2 1270 aa8.74□□□□□ -1.01
TM4SF1-201ENST00000305366 PCDHA1Q9Y5I3 950 aa8.74□□□□□ -1.01
TM4SF1-201ENST00000305366 PHLPP2Q6ZVD8 1323 aa8.74□□□□□ -1.01
TM4SF1-201ENST00000305366 GTPBP6O43824 516 aaPredicted RBP8.73□□□□□ -1.01
TM4SF1-201ENST00000305366 TLL1O43897 1013 aa8.73□□□□□ -1.01
TM4SF1-201ENST00000305366 EIF3JO75822 258 aaKnown RBP8.73□□□□□ -1.01
TM4SF1-201ENST00000305366 PFKMP08237 780 aa8.73□□□□□ -1.01
TM4SF1-201ENST00000305366 PRR29P0C7W0 189 aa8.73□□□□□ -1.01
TM4SF1-201ENST00000305366 TRAPPC10P48553 1259 aa8.73□□□□□ -1.01
TM4SF1-201ENST00000305366 PSEN2P49810 448 aa8.73□□□□□ -1.01
TM4SF1-201ENST00000305366 DGKDQ16760 1214 aa8.73□□□□□ -1.01
TM4SF1-201ENST00000305366 KIAA0753Q2KHM9 967 aa8.73□□□□□ -1.01
TM4SF1-201ENST00000305366 HERC6Q8IVU3 1022 aa8.73□□□□□ -1.01
TM4SF1-201ENST00000305366 ANKS1AQ92625 1134 aa8.73□□□□□ -1.01
TM4SF1-201ENST00000305366 KAT2BQ92831 832 aa8.73□□□□□ -1.01
TM4SF1-201ENST00000305366 IWS1Q96ST2 819 aa8.73□□□□□ -1.01
TM4SF1-201ENST00000305366 UHRF1Q96T88 793 aaPredicted RBP8.73□□□□□ -1.01
TM4SF1-201ENST00000305366 AMNQ9BXJ7 453 aa8.73□□□□□ -1.01
TM4SF1-201ENST00000305366 CSRNP2Q9H175 543 aa8.73□□□□□ -1.01
TM4SF1-201ENST00000305366 PXMP2Q9NR77 195 aa8.73□□□□□ -1.01
TM4SF1-201ENST00000305366 INTS13Q9NVM9 706 aa8.73□□□□□ -1.01
TM4SF1-201ENST00000305366 WDR70Q9NW82 654 aa8.73□□□□□ -1.01
TM4SF1-201ENST00000305366 RAPGEFL1Q9UHV5 662 aa8.73□□□□□ -1.01
TM4SF1-201ENST00000305366 DDX41Q9UJV9 622 aaKnown RBP8.73□□□□□ -1.01
TM4SF1-201ENST00000305366 PLXNA1Q9UIW2 1896 aa8.73□□□□□ -1.01
TM4SF1-201ENST00000305366 CNTNAP5Q8WYK1 1306 aa8.73□□□□□ -1.01
TM4SF1-201ENST00000305366 ARHGAP6O43182 974 aa8.73□□□□□ -1.01
TM4SF1-201ENST00000305366 PPP1R11O60927 126 aaPredicted RBP8.73□□□□□ -1.01
TM4SF1-201ENST00000305366 SLFN14P0C7P3 912 aa8.73□□□□□ -1.01
TM4SF1-201ENST00000305366 RFC2P35250 354 aa8.73□□□□□ -1.01
TM4SF1-201ENST00000305366 ETF1P62495 437 aaKnown RBP8.73□□□□□ -1.01
TM4SF1-201ENST00000305366 PTPN11Q06124 597 aaPredicted RBP8.73□□□□□ -1.01
TM4SF1-201ENST00000305366 MFSD10Q14728 455 aa8.73□□□□□ -1.01
TM4SF1-201ENST00000305366 NPY5RQ15761 445 aa8.73□□□□□ -1.01
TM4SF1-201ENST00000305366 SPECC1Q5M775 1068 aa8.73□□□□□ -1.01
TM4SF1-201ENST00000305366 LRRC8DQ7L1W4 858 aa8.73□□□□□ -1.01
TM4SF1-201ENST00000305366 TMEM139Q8IV31 216 aa8.73□□□□□ -1.01
TM4SF1-201ENST00000305366 CMTR1Q8N1G2 835 aaKnown RBP8.73□□□□□ -1.01
TM4SF1-201ENST00000305366 DHX38Q92620 1227 aaKnown RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms