RNA–Protein interactions for RNA: ENST00000296449.9

CCDC36-201, Transcript of coiled-coil domain containing 36, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC36, Length 2,613 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC36-201ENST00000296449 DAAM2Q86T65 1068 aa11.1□□□□□ -0.63
CCDC36-201ENST00000296449 FAM228AQ86W67 206 aa11.1□□□□□ -0.63
CCDC36-201ENST00000296449 PARP9Q8IXQ6 854 aa11.1□□□□□ -0.63
CCDC36-201ENST00000296449 LMBR1Q8WVP7 490 aa11.1□□□□□ -0.63
CCDC36-201ENST00000296449 TLCD1Q96CP7 247 aa11.1□□□□□ -0.63
CCDC36-201ENST00000296449 SGSM3Q96HU1 749 aa11.1□□□□□ -0.63
CCDC36-201ENST00000296449 PSMD1Q99460 953 aa11.1□□□□□ -0.63
CCDC36-201ENST00000296449 FAM114A2Q9NRY5 505 aa11.1□□□□□ -0.63
CCDC36-201ENST00000296449 HAUS2Q9NVX0 235 aa11.1□□□□□ -0.63
CCDC36-201ENST00000296449 TRAF3IP3Q9Y228 551 aa11.1□□□□□ -0.63
CCDC36-201ENST00000296449 DDX3XO00571 662 aaKnown RBP eCLIP11.09□□□□□ -0.63
CCDC36-201ENST00000296449 KRT18P05783 430 aaKnown RBP11.09□□□□□ -0.63
CCDC36-201ENST00000296449 HOXD13P35453 343 aa11.09□□□□□ -0.63
CCDC36-201ENST00000296449 SLC12A3P55017 1021 aa11.09□□□□□ -0.63
CCDC36-201ENST00000296449 EIF6P56537 245 aaKnown RBP11.09□□□□□ -0.63
CCDC36-201ENST00000296449 JAM2P57087 298 aa11.09□□□□□ -0.63
CCDC36-201ENST00000296449 RHBDL3P58872 404 aa11.09□□□□□ -0.63
CCDC36-201ENST00000296449 SNCBQ16143 134 aa11.09□□□□□ -0.63
CCDC36-201ENST00000296449 GKAP1Q5VSY0 366 aaPredicted RBP11.09□□□□□ -0.63
CCDC36-201ENST00000296449 CLEC10AQ8IUN9 316 aa11.09□□□□□ -0.63
CCDC36-201ENST00000296449 ADGRF4Q8IZF3 695 aa11.09□□□□□ -0.63
CCDC36-201ENST00000296449 MDM1Q8TC05 714 aa11.09□□□□□ -0.63
CCDC36-201ENST00000296449 ATP8B4Q8TF62 1192 aa11.09□□□□□ -0.63
CCDC36-201ENST00000296449 CUL5Q93034 780 aa11.09□□□□□ -0.63
CCDC36-201ENST00000296449 TRIM51Q9BSJ1 452 aa11.09□□□□□ -0.63
CCDC36-201ENST00000296449 TXLNGYQ9BZA5 131 aa11.09□□□□□ -0.63
CCDC36-201ENST00000296449 SIX2Q9NPC8 291 aa11.09□□□□□ -0.63
CCDC36-201ENST00000296449 MCM8Q9UJA3 840 aa11.09□□□□□ -0.63
CCDC36-201ENST00000296449 INTUQ9ULD6 942 aa11.09□□□□□ -0.63
CCDC36-201ENST00000296449 UTP11Q9Y3A2 253 aaKnown RBP11.09□□□□□ -0.63
CCDC36-201ENST00000296449 NR2E1Q9Y466 385 aa11.09□□□□□ -0.63
CCDC36-201ENST00000296449 PITPNM2Q9BZ72 1349 aa11.09□□□□□ -0.63
CCDC36-201ENST00000296449 F8W031 263 aaPredicted RBP11.09□□□□□ -0.63
CCDC36-201ENST00000296449 PPFIA2O75334 1257 aa11.09□□□□□ -0.63
CCDC36-201ENST00000296449 MED24O75448 989 aa11.09□□□□□ -0.63
CCDC36-201ENST00000296449 GHRP10912 638 aa11.09□□□□□ -0.63
CCDC36-201ENST00000296449 XRCC5P13010 732 aaKnown RBP11.09□□□□□ -0.63
CCDC36-201ENST00000296449 NPEPPSP55786 919 aa11.09□□□□□ -0.63
CCDC36-201ENST00000296449 NFIXQ14938 502 aa11.09□□□□□ -0.63
CCDC36-201ENST00000296449 KNOP1Q1ED39 458 aaKnown RBP11.09□□□□□ -0.63
CCDC36-201ENST00000296449 ZNF804AQ7Z570 1209 aa11.09□□□□□ -0.63
CCDC36-201ENST00000296449 CPLX4Q7Z7G2 160 aa11.09□□□□□ -0.63
CCDC36-201ENST00000296449 SYCE1Q8N0S2 351 aa11.09□□□□□ -0.63
CCDC36-201ENST00000296449 CCT6BQ92526 530 aa11.09□□□□□ -0.63
CCDC36-201ENST00000296449 CENPTQ96BT3 561 aa11.09□□□□□ -0.63
CCDC36-201ENST00000296449 DHX36Q9H2U1 1008 aaKnown RBP11.09□□□□□ -0.63
CCDC36-201ENST00000296449 CNOT10Q9H9A5 744 aaKnown RBP11.09□□□□□ -0.63
CCDC36-201ENST00000296449 TTC7AQ9ULT0 858 aaPredicted RBP11.09□□□□□ -0.63
CCDC36-201ENST00000296449 ATP8A1Q9Y2Q0 1164 aa11.09□□□□□ -0.63
CCDC36-201ENST00000296449 SPATA31A1Q5TZJ5 1347 aa11.09□□□□□ -0.63
CCDC36-201ENST00000296449 COL16A1Q07092 1604 aaPredicted RBP11.09□□□□□ -0.63
CCDC36-201ENST00000296449 PLIN4Q96Q06 1357 aa11.08□□□□□ -0.64
CCDC36-201ENST00000296449 POTEFA5A3E0 1075 aa11.08□□□□□ -0.64
CCDC36-201ENST00000296449 AKAP3O75969 853 aa11.08□□□□□ -0.64
CCDC36-201ENST00000296449 FGGP02679 453 aa11.08□□□□□ -0.64
CCDC36-201ENST00000296449 POTEIP0CG38 1075 aa11.08□□□□□ -0.64
CCDC36-201ENST00000296449 STAT3P40763 770 aa11.08□□□□□ -0.64
CCDC36-201ENST00000296449 MRPL12P52815 198 aaKnown RBP11.08□□□□□ -0.64
CCDC36-201ENST00000296449 EIF3BP55884 814 aaKnown RBP11.08□□□□□ -0.64
CCDC36-201ENST00000296449 ZNF543Q08ER8 600 aa11.08□□□□□ -0.64
CCDC36-201ENST00000296449 IFFO1Q0D2I5 559 aa11.08□□□□□ -0.64
CCDC36-201ENST00000296449 TMEM132AQ24JP5 1023 aa11.08□□□□□ -0.64
CCDC36-201ENST00000296449 DCAF17Q5H9S7 520 aaPredicted RBP11.08□□□□□ -0.64
CCDC36-201ENST00000296449 ERMARDQ5T6L9 678 aa11.08□□□□□ -0.64
CCDC36-201ENST00000296449 GJB7Q6PEY0 223 aa11.08□□□□□ -0.64
CCDC36-201ENST00000296449 POTEGQ6S5H5 508 aa11.08□□□□□ -0.64
CCDC36-201ENST00000296449 POTEEQ6S8J3 1075 aa11.08□□□□□ -0.64
CCDC36-201ENST00000296449 TPTE2Q6XPS3 522 aa11.08□□□□□ -0.64
CCDC36-201ENST00000296449 VPS36Q86VN1 386 aa11.08□□□□□ -0.64
CCDC36-201ENST00000296449 U2AF1L4Q8WU68 220 aaKnown RBP11.08□□□□□ -0.64
CCDC36-201ENST00000296449 FMO2Q99518 471 aa11.08□□□□□ -0.64
CCDC36-201ENST00000296449 TRIM31Q9BZY9 425 aa11.08□□□□□ -0.64
CCDC36-201ENST00000296449 SWAP70Q9UH65 585 aa11.08□□□□□ -0.64
CCDC36-201ENST00000296449 ZNF831Q5JPB2 1677 aa11.08□□□□□ -0.64
CCDC36-201ENST00000296449 CAND2O75155 1236 aa11.08□□□□□ -0.64
CCDC36-201ENST00000296449 ATP2C2O75185 946 aa11.08□□□□□ -0.64
CCDC36-201ENST00000296449 GALCP54803 685 aa11.08□□□□□ -0.64
CCDC36-201ENST00000296449 XRCC4Q13426 336 aa11.08□□□□□ -0.64
CCDC36-201ENST00000296449 GIT2Q14161 759 aa11.08□□□□□ -0.64
CCDC36-201ENST00000296449 TTBK2Q6IQ55 1244 aa11.08□□□□□ -0.64
CCDC36-201ENST00000296449 EPM2AIP1Q7L775 607 aaPredicted RBP11.08□□□□□ -0.64
CCDC36-201ENST00000296449 OLIG1Q8TAK6 271 aa11.08□□□□□ -0.64
CCDC36-201ENST00000296449 CHMP6Q96FZ7 201 aa11.08□□□□□ -0.64
CCDC36-201ENST00000296449 XPO6Q96QU8 1125 aaKnown RBP11.08□□□□□ -0.64
CCDC36-201ENST00000296449 EPB41L4BQ9H329 900 aa11.08□□□□□ -0.64
CCDC36-201ENST00000296449 KDM4CQ9H3R0 1056 aa11.08□□□□□ -0.64
CCDC36-201ENST00000296449 PSTPIP2Q9H939 334 aa11.08□□□□□ -0.64
CCDC36-201ENST00000296449 KCNMB3Q9NPA1 279 aa11.08□□□□□ -0.64
CCDC36-201ENST00000296449 NARFQ9UHQ1 456 aa11.08□□□□□ -0.64
CCDC36-201ENST00000296449 TPX2Q9ULW0 747 aaKnown RBP11.08□□□□□ -0.64
CCDC36-201ENST00000296449 ATF5Q9Y2D1 282 aaPredicted RBP11.08□□□□□ -0.64
CCDC36-201ENST00000296449 BUB1BO60566 1050 aaPredicted RBP11.07□□□□□ -0.64
CCDC36-201ENST00000296449 AKR1B1P15121 316 aa11.07□□□□□ -0.64
CCDC36-201ENST00000296449 PLCG2P16885 1265 aa11.07□□□□□ -0.64
CCDC36-201ENST00000296449 RFC4P35249 363 aa11.07□□□□□ -0.64
CCDC36-201ENST00000296449 DCAF12L1Q5VU92 463 aa11.07□□□□□ -0.64
CCDC36-201ENST00000296449 TCERG1LQ5VWI1 586 aa11.07□□□□□ -0.64
CCDC36-201ENST00000296449 SFR1Q86XK3 245 aa11.07□□□□□ -0.64
CCDC36-201ENST00000296449 GIMAP7Q8NHV1 300 aa11.07□□□□□ -0.64
CCDC36-201ENST00000296449 SLC35C1Q96A29 364 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms