RNA–Protein interactions for RNA: ENST00000294053.7

CLPB-201, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLPB, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-201ENST00000294053 PLIN4Q96Q06 1357 aa13.14□□□□□ -0.31
CLPB-201ENST00000294053 NPHP3-ACAD11A0A0J9YXS1 232 aa13.14□□□□□ -0.31
CLPB-201ENST00000294053 AP1G2O75843 785 aa13.14□□□□□ -0.31
CLPB-201ENST00000294053 ANP32DO95626 131 aa13.14□□□□□ -0.31
CLPB-201ENST00000294053 EEF2P13639 858 aaKnown RBP13.14□□□□□ -0.31
CLPB-201ENST00000294053 STAT3P40763 770 aa13.14□□□□□ -0.31
CLPB-201ENST00000294053 NBPF9Q3BBW0 867 aa13.14□□□□□ -0.31
CLPB-201ENST00000294053 KIF2BQ8N4N8 673 aa13.14□□□□□ -0.31
CLPB-201ENST00000294053 LARP4BQ92615 738 aaKnown RBP13.14□□□□□ -0.31
CLPB-201ENST00000294053 C7orf25Q9BPX7 421 aa13.14□□□□□ -0.31
CLPB-201ENST00000294053 NUP58Q9BVL2 599 aa13.14□□□□□ -0.31
CLPB-201ENST00000294053 FBXL5Q9UKA1 691 aa13.14□□□□□ -0.31
CLPB-201ENST00000294053 ATP8A1Q9Y2Q0 1164 aa13.14□□□□□ -0.31
CLPB-201ENST00000294053 PNMA6FA0A0J9YX94 578 aa13.13□□□□□ -0.31
CLPB-201ENST00000294053 APBA3O96018 575 aa13.13□□□□□ -0.31
CLPB-201ENST00000294053 CCNE1P24864 410 aa13.13□□□□□ -0.31
CLPB-201ENST00000294053 SEPT2Q15019 361 aa13.13□□□□□ -0.31
CLPB-201ENST00000294053 KIAA0753Q2KHM9 967 aa13.13□□□□□ -0.31
CLPB-201ENST00000294053 CCDC50Q8IVM0 306 aa13.13□□□□□ -0.31
CLPB-201ENST00000294053 ARMC2Q8NEN0 867 aa13.13□□□□□ -0.31
CLPB-201ENST00000294053 PIK3R5Q8WYR1 880 aa13.13□□□□□ -0.31
CLPB-201ENST00000294053 CALR3Q96L12 384 aaKnown RBP13.13□□□□□ -0.31
CLPB-201ENST00000294053 CNOT8Q9UFF9 292 aaKnown RBP13.13□□□□□ -0.31
CLPB-201ENST00000294053 FAM198AQ9UFP1 575 aa13.13□□□□□ -0.31
CLPB-201ENST00000294053 DDX25Q9UHL0 483 aaKnown RBP13.13□□□□□ -0.31
CLPB-201ENST00000294053 NPR1P16066 1061 aa13.13□□□□□ -0.31
CLPB-201ENST00000294053 SLCO1A2P46721 670 aa13.13□□□□□ -0.31
CLPB-201ENST00000294053 USH1GQ495M9 461 aa13.13□□□□□ -0.31
CLPB-201ENST00000294053 SV2BQ7L1I2 683 aa13.13□□□□□ -0.31
CLPB-201ENST00000294053 PARD3BQ8TEW8 1205 aa13.13□□□□□ -0.31
CLPB-201ENST00000294053 DDX12PQ92771 950 aa13.13□□□□□ -0.31
CLPB-201ENST00000294053 CAVIN3Q969G5 261 aa13.13□□□□□ -0.31
CLPB-201ENST00000294053 CDK5RAP3Q96JB5 506 aa13.13□□□□□ -0.31
CLPB-201ENST00000294053 THAP9Q9H5L6 903 aa13.13□□□□□ -0.31
CLPB-201ENST00000294053 SPATS2LQ9NUQ6 558 aaKnown RBP13.13□□□□□ -0.31
CLPB-201ENST00000294053 ADAMTS1Q9UHI8 967 aa13.13□□□□□ -0.31
CLPB-201ENST00000294053 TNS1Q9HBL0 1735 aaKnown RBP13.13□□□□□ -0.31
CLPB-201ENST00000294053 A0A1W2PQC6 194 aa13.13□□□□□ -0.31
CLPB-201ENST00000294053 ESYT2A0FGR8 921 aa13.13□□□□□ -0.31
CLPB-201ENST00000294053 SNX1Q13596 522 aa13.13□□□□□ -0.31
CLPB-201ENST00000294053 RAPGEF1Q13905 1077 aa13.13□□□□□ -0.31
CLPB-201ENST00000294053 QRICH1Q2TAL8 776 aa13.13□□□□□ -0.31
CLPB-201ENST00000294053 AP1ARQ63HQ0 302 aa13.13□□□□□ -0.31
CLPB-201ENST00000294053 SIAH1Q8IUQ4 282 aa13.13□□□□□ -0.31
CLPB-201ENST00000294053 EGFL6Q8IUX8 553 aa13.13□□□□□ -0.31
CLPB-201ENST00000294053 SPICE1Q8N0Z3 855 aa13.13□□□□□ -0.31
CLPB-201ENST00000294053 PRCCQ92733 491 aaPredicted RBP13.13□□□□□ -0.31
CLPB-201ENST00000294053 PSTPIP2Q9H939 334 aa13.13□□□□□ -0.31
CLPB-201ENST00000294053 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.13□□□□□ -0.31
CLPB-201ENST00000294053 NRXN2Q9P2S2 1712 aa13.12□□□□□ -0.31
CLPB-201ENST00000294053 E9PMD0 336 aa13.12□□□□□ -0.31
CLPB-201ENST00000294053 ZBTB5O15062 677 aa13.12□□□□□ -0.31
CLPB-201ENST00000294053 PLSCR1O15162 318 aa13.12□□□□□ -0.31
CLPB-201ENST00000294053 ATP6V1G2O95670 118 aa13.12□□□□□ -0.31
CLPB-201ENST00000294053 FLT3P36888 993 aa13.12□□□□□ -0.31
CLPB-201ENST00000294053 GNPTABQ3T906 1256 aa13.12□□□□□ -0.31
CLPB-201ENST00000294053 KLHDC7AQ5VTJ3 777 aa13.12□□□□□ -0.31
CLPB-201ENST00000294053 ARMC3Q5W041 872 aa13.12□□□□□ -0.31
CLPB-201ENST00000294053 BCAS3Q9H6U6 928 aa13.12□□□□□ -0.31
CLPB-201ENST00000294053 RIC8AQ9NPQ8 531 aa13.12□□□□□ -0.31
CLPB-201ENST00000294053 CPSF2Q9P2I0 782 aaKnown RBP13.12□□□□□ -0.31
CLPB-201ENST00000294053 DAPK3O43293 454 aa13.12□□□□□ -0.31
CLPB-201ENST00000294053 CLK2P49760 499 aaKnown RBP13.12□□□□□ -0.31
CLPB-201ENST00000294053 DHX9Q08211 1270 aaKnown RBP13.12□□□□□ -0.31
CLPB-201ENST00000294053 RRP1BQ14684 758 aaKnown RBP13.12□□□□□ -0.31
CLPB-201ENST00000294053 MEA1Q16626 185 aa13.12□□□□□ -0.31
CLPB-201ENST00000294053 AOC3Q16853 763 aa13.12□□□□□ -0.31
CLPB-201ENST00000294053 ANKS4BQ8N8V4 417 aa13.12□□□□□ -0.31
CLPB-201ENST00000294053 LMBR1Q8WVP7 490 aa13.12□□□□□ -0.31
CLPB-201ENST00000294053 DYDC1Q8WWB3 177 aa13.12□□□□□ -0.31
CLPB-201ENST00000294053 TBC1D5Q92609 795 aa13.12□□□□□ -0.31
CLPB-201ENST00000294053 TTYH3Q9C0H2 523 aa13.12□□□□□ -0.31
CLPB-201ENST00000294053 TDRD3Q9H7E2 651 aaKnown RBP13.12□□□□□ -0.31
CLPB-201ENST00000294053 MLXIPLQ9NP71 852 aa13.12□□□□□ -0.31
CLPB-201ENST00000294053 PNMA2Q9UL42 364 aa13.12□□□□□ -0.31
CLPB-201ENST00000294053 MARCH6O60337 910 aa13.11□□□□□ -0.31
CLPB-201ENST00000294053 PPP2R2AP63151 447 aa13.11□□□□□ -0.31
CLPB-201ENST00000294053 TNNC1P63316 161 aa13.11□□□□□ -0.31
CLPB-201ENST00000294053 ELF3P78545 371 aaPredicted RBP13.11□□□□□ -0.31
CLPB-201ENST00000294053 CDC37Q16543 378 aaPredicted RBP13.11□□□□□ -0.31
CLPB-201ENST00000294053 WLSQ5T9L3 541 aa13.11□□□□□ -0.31
CLPB-201ENST00000294053 THEMIS2Q5TEJ8 643 aa13.11□□□□□ -0.31
CLPB-201ENST00000294053 CAPRIN2Q6IMN6 1127 aaKnown RBP13.11□□□□□ -0.31
CLPB-201ENST00000294053 YTHDF3Q7Z739 585 aaKnown RBP13.11□□□□□ -0.31
CLPB-201ENST00000294053 CUL5Q93034 780 aa13.11□□□□□ -0.31
CLPB-201ENST00000294053 DHTKD1Q96HY7 919 aaPredicted RBP13.11□□□□□ -0.31
CLPB-201ENST00000294053 LBHD1Q9BQE6 289 aaPredicted RBP13.11□□□□□ -0.31
CLPB-201ENST00000294053 AMACRQ9UHK6 382 aa13.11□□□□□ -0.31
CLPB-201ENST00000294053 PCDHA1Q9Y5I3 950 aa13.11□□□□□ -0.31
CLPB-201ENST00000294053 SIPA1L1O43166 1804 aa13.11□□□□□ -0.31
CLPB-201ENST00000294053 ARFGEF1Q9Y6D6 1849 aa13.11□□□□□ -0.31
CLPB-201ENST00000294053 POTEB3A0JP26 581 aa13.11□□□□□ -0.31
CLPB-201ENST00000294053 POTECB2RU33 542 aa13.11□□□□□ -0.31
CLPB-201ENST00000294053 HLA-DOAP06340 250 aa13.11□□□□□ -0.31
CLPB-201ENST00000294053 SMARCA1P28370 1054 aa13.11□□□□□ -0.31
CLPB-201ENST00000294053 NT5C2P49902 561 aa13.11□□□□□ -0.31
CLPB-201ENST00000294053 FXR2P51116 673 aaKnown RBP eCLIP13.11□□□□□ -0.31
CLPB-201ENST00000294053 GLE1Q53GS7 698 aaKnown RBP13.11□□□□□ -0.31
CLPB-201ENST00000294053 POTEBQ6S5H4 581 aa13.11□□□□□ -0.31
CLPB-201ENST00000294053 NLGN1Q8N2Q7 840 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms