RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 SND1Q7KZF4 910 aaKnown RBP eCLIP20.09■□□□□ 0.81
PDLIM3-201ENST00000284767 CAPS2Q9BXY5 557 aa20.09■□□□□ 0.81
PDLIM3-201ENST00000284767 IFIH1Q9BYX4 1025 aaKnown RBP20.09■□□□□ 0.81
PDLIM3-201ENST00000284767 A6NNZ2 444 aa20.09■□□□□ 0.81
PDLIM3-201ENST00000284767 EPB41P11171 864 aaKnown RBP20.09■□□□□ 0.81
PDLIM3-201ENST00000284767 EPHB4P54760 987 aa20.09■□□□□ 0.81
PDLIM3-201ENST00000284767 TRAF1Q13077 416 aa20.09■□□□□ 0.81
PDLIM3-201ENST00000284767 TUBB8Q3ZCM7 444 aa20.09■□□□□ 0.81
PDLIM3-201ENST00000284767 CEP55Q53EZ4 464 aa20.09■□□□□ 0.81
PDLIM3-201ENST00000284767 LRCH2Q5VUJ6 765 aa20.09■□□□□ 0.81
PDLIM3-201ENST00000284767 EMBQ6PCB8 327 aa20.09■□□□□ 0.81
PDLIM3-201ENST00000284767 OTOP1Q7RTM1 612 aa20.09■□□□□ 0.81
PDLIM3-201ENST00000284767 NELFCDQ8IXH7 590 aa20.09■□□□□ 0.81
PDLIM3-201ENST00000284767 SPATA4Q8NEY3 305 aa20.09■□□□□ 0.81
PDLIM3-201ENST00000284767 PIGOQ8TEQ8 1089 aa20.09■□□□□ 0.81
PDLIM3-201ENST00000284767 PCDHA13Q9Y5I0 950 aa20.09■□□□□ 0.81
PDLIM3-201ENST00000284767 KRT18P05783 430 aaKnown RBP20.08■□□□□ 0.81
PDLIM3-201ENST00000284767 TNFRSF8P28908 595 aa20.08■□□□□ 0.81
PDLIM3-201ENST00000284767 FAM26FQ5R3K3 315 aa20.08■□□□□ 0.81
PDLIM3-201ENST00000284767 ALS2CLQ60I27 953 aa20.08■□□□□ 0.81
PDLIM3-201ENST00000284767 GUF1Q8N442 669 aaKnown RBP20.08■□□□□ 0.81
PDLIM3-201ENST00000284767 ERMNQ8TAM6 284 aa20.08■□□□□ 0.81
PDLIM3-201ENST00000284767 ALS2CR12Q96Q35 445 aa20.08■□□□□ 0.81
PDLIM3-201ENST00000284767 LRRC1Q9BTT6 524 aa20.08■□□□□ 0.81
PDLIM3-201ENST00000284767 SLC38A10Q9HBR0 1119 aa20.08■□□□□ 0.81
PDLIM3-201ENST00000284767 HYOU1Q9Y4L1 999 aa20.08■□□□□ 0.81
PDLIM3-201ENST00000284767 DDX39AO00148 427 aaKnown RBP20.08■□□□□ 0.8
PDLIM3-201ENST00000284767 EBAG9O00559 213 aa20.08■□□□□ 0.8
PDLIM3-201ENST00000284767 PSMD10O75832 226 aa20.08■□□□□ 0.8
PDLIM3-201ENST00000284767 HERC4Q5GLZ8 1057 aaPredicted RBP20.08■□□□□ 0.8
PDLIM3-201ENST00000284767 SCYL3Q8IZE3 742 aa20.08■□□□□ 0.8
PDLIM3-201ENST00000284767 LRRC27Q9C0I9 530 aa20.08■□□□□ 0.8
PDLIM3-201ENST00000284767 BHMT2Q9H2M3 363 aa20.08■□□□□ 0.8
PDLIM3-201ENST00000284767 BMP2KQ9NSY1 1161 aaPredicted RBP20.08■□□□□ 0.8
PDLIM3-201ENST00000284767 CAPN6Q9Y6Q1 641 aa20.08■□□□□ 0.8
PDLIM3-201ENST00000284767 ZHX2Q9Y6X8 837 aa20.08■□□□□ 0.8
PDLIM3-201ENST00000284767 EIF3HO15372 352 aaKnown RBP eCLIP20.07■□□□□ 0.8
PDLIM3-201ENST00000284767 PTPRAP18433 802 aa20.07■□□□□ 0.8
PDLIM3-201ENST00000284767 HMGCS2P54868 508 aa20.07■□□□□ 0.8
PDLIM3-201ENST00000284767 ATG4CQ96DT6 458 aa20.07■□□□□ 0.8
PDLIM3-201ENST00000284767 OSBPL9Q96SU4 736 aa20.07■□□□□ 0.8
PDLIM3-201ENST00000284767 DNM3Q9UQ16 869 aa20.07■□□□□ 0.8
PDLIM3-201ENST00000284767 PCDHA2Q9Y5H9 948 aa20.07■□□□□ 0.8
PDLIM3-201ENST00000284767 RSPH10B2B2RC85 870 aa20.07■□□□□ 0.8
PDLIM3-201ENST00000284767 ANKRD65E5RJM6 399 aa20.07■□□□□ 0.8
PDLIM3-201ENST00000284767 DDNO94850 711 aaPredicted RBP20.07■□□□□ 0.8
PDLIM3-201ENST00000284767 RSPH10BP0C881 870 aa20.07■□□□□ 0.8
PDLIM3-201ENST00000284767 ITGB5P18084 799 aa20.07■□□□□ 0.8
PDLIM3-201ENST00000284767 HSD17B4P51659 736 aa20.07■□□□□ 0.8
PDLIM3-201ENST00000284767 CASP5P51878 434 aa20.07■□□□□ 0.8
PDLIM3-201ENST00000284767 TPH2Q8IWU9 490 aa20.07■□□□□ 0.8
PDLIM3-201ENST00000284767 CAVIN3Q969G5 261 aa20.07■□□□□ 0.8
PDLIM3-201ENST00000284767 DYDC2Q96IM9 177 aa20.07■□□□□ 0.8
PDLIM3-201ENST00000284767 DMGDHQ9UI17 866 aaKnown RBP20.07■□□□□ 0.8
PDLIM3-201ENST00000284767 PPP1R9AQ9ULJ8 1098 aa20.07■□□□□ 0.8
PDLIM3-201ENST00000284767 RIPK3Q9Y572 518 aa20.07■□□□□ 0.8
PDLIM3-201ENST00000284767 KIF11P52732 1056 aa20.06■□□□□ 0.8
PDLIM3-201ENST00000284767 DCAF15Q66K64 600 aa20.06■□□□□ 0.8
PDLIM3-201ENST00000284767 KRT26Q7Z3Y9 468 aa20.06■□□□□ 0.8
PDLIM3-201ENST00000284767 CCDC155Q8N6L0 562 aa20.06■□□□□ 0.8
PDLIM3-201ENST00000284767 REEP2Q9BRK0 252 aa20.06■□□□□ 0.8
PDLIM3-201ENST00000284767 ZNF577Q9BSK1 485 aa20.06■□□□□ 0.8
PDLIM3-201ENST00000284767 FHDC1Q9C0D6 1143 aaPredicted RBP20.06■□□□□ 0.8
PDLIM3-201ENST00000284767 STIM2Q9P246 746 aa20.06■□□□□ 0.8
PDLIM3-201ENST00000284767 ARHGAP20Q9P2F6 1191 aa20.06■□□□□ 0.8
PDLIM3-201ENST00000284767 POLR2AP24928 1970 aaKnown RBP20.06■□□□□ 0.8
PDLIM3-201ENST00000284767 CCT5P48643 541 aa20.06■□□□□ 0.8
PDLIM3-201ENST00000284767 BACE1P56817 501 aa20.06■□□□□ 0.8
PDLIM3-201ENST00000284767 GIT2Q14161 759 aa20.06■□□□□ 0.8
PDLIM3-201ENST00000284767 MYOCDQ8IZQ8 938 aa20.06■□□□□ 0.8
PDLIM3-201ENST00000284767 SMCR8Q8TEV9 937 aaPredicted RBP20.06■□□□□ 0.8
PDLIM3-201ENST00000284767 HDAC7Q8WUI4 952 aa20.06■□□□□ 0.8
PDLIM3-201ENST00000284767 SLC5A5Q92911 643 aa20.06■□□□□ 0.8
PDLIM3-201ENST00000284767 RUSC1Q9BVN2 902 aa20.06■□□□□ 0.8
PDLIM3-201ENST00000284767 WDR11Q9BZH6 1224 aa20.06■□□□□ 0.8
PDLIM3-201ENST00000284767 WRAP73Q9P2S5 460 aaPredicted RBP20.06■□□□□ 0.8
PDLIM3-201ENST00000284767 GRIN2DO15399 1336 aa20.05■□□□□ 0.8
PDLIM3-201ENST00000284767 GAS7O60861 476 aa20.05■□□□□ 0.8
PDLIM3-201ENST00000284767 SLITRK3O94933 977 aa20.05■□□□□ 0.8
PDLIM3-201ENST00000284767 NNTQ13423 1086 aa20.05■□□□□ 0.8
PDLIM3-201ENST00000284767 CCDC181Q5TID7 509 aa20.05■□□□□ 0.8
PDLIM3-201ENST00000284767 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.05■□□□□ 0.8
PDLIM3-201ENST00000284767 SYT2Q8N9I0 419 aaPredicted RBP20.05■□□□□ 0.8
PDLIM3-201ENST00000284767 SSC5DA1L4H1 1573 aa20.05■□□□□ 0.8
PDLIM3-201ENST00000284767 MOCS3O95396 460 aa20.05■□□□□ 0.8
PDLIM3-201ENST00000284767 PLEKP08567 350 aaPredicted RBP20.05■□□□□ 0.8
PDLIM3-201ENST00000284767 LMNB1P20700 586 aa20.05■□□□□ 0.8
PDLIM3-201ENST00000284767 GTF2A1P52655 376 aaPredicted RBP20.05■□□□□ 0.8
PDLIM3-201ENST00000284767 SKOR1P84550 965 aa20.05■□□□□ 0.8
PDLIM3-201ENST00000284767 PSMD2Q13200 908 aa20.05■□□□□ 0.8
PDLIM3-201ENST00000284767 VWA3BQ502W6 1294 aa20.05■□□□□ 0.8
PDLIM3-201ENST00000284767 GLE1Q53GS7 698 aaKnown RBP20.05■□□□□ 0.8
PDLIM3-201ENST00000284767 LRRC55Q6ZSA7 311 aa20.05■□□□□ 0.8
PDLIM3-201ENST00000284767 CCDC65Q8IXS2 484 aa20.05■□□□□ 0.8
PDLIM3-201ENST00000284767 GPC2Q8N158 579 aa20.05■□□□□ 0.8
PDLIM3-201ENST00000284767 ZNF280CQ8ND82 737 aa20.05■□□□□ 0.8
PDLIM3-201ENST00000284767 HSD17B14Q9BPX1 270 aa20.05■□□□□ 0.8
PDLIM3-201ENST00000284767 UNC45AQ9H3U1 944 aa20.05■□□□□ 0.8
PDLIM3-201ENST00000284767 DEF6Q9H4E7 631 aa20.05■□□□□ 0.8
PDLIM3-201ENST00000284767 MLXIPQ9HAP2 919 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms