RNA–Protein interactions for RNA: ENST00000273027.6

CPNE9-201, Transcript of copine family member 9, humanhuman

TSL 3

Gene CPNE9, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-201ENST00000273027 ENC1O14682 589 aa11.06□□□□□ -0.64
CPNE9-201ENST00000273027 ZNF263O14978 683 aa11.06□□□□□ -0.64
CPNE9-201ENST00000273027 EIF3DO15371 548 aaKnown RBP eCLIP11.06□□□□□ -0.64
CPNE9-201ENST00000273027 EDIL3O43854 480 aa11.06□□□□□ -0.64
CPNE9-201ENST00000273027 PPP1R12BO60237 982 aaPredicted RBP11.06□□□□□ -0.64
CPNE9-201ENST00000273027 CYP3A4P08684 503 aa11.06□□□□□ -0.64
CPNE9-201ENST00000273027 CYP11B2P19099 503 aa11.06□□□□□ -0.64
CPNE9-201ENST00000273027 PRKCIP41743 596 aa11.06□□□□□ -0.64
CPNE9-201ENST00000273027 TNNT3P45378 269 aaPredicted RBP11.06□□□□□ -0.64
CPNE9-201ENST00000273027 NPEPPSP55786 919 aa11.06□□□□□ -0.64
CPNE9-201ENST00000273027 TNNC1P63316 161 aa11.06□□□□□ -0.64
CPNE9-201ENST00000273027 SP3Q02447 781 aa11.06□□□□□ -0.64
CPNE9-201ENST00000273027 KCNMA1Q12791 1236 aa11.06□□□□□ -0.64
CPNE9-201ENST00000273027 PAK2Q13177 524 aa11.06□□□□□ -0.64
CPNE9-201ENST00000273027 TDRD12Q587J7 1177 aaKnown RBP11.06□□□□□ -0.64
CPNE9-201ENST00000273027 DACT2Q5SW24 774 aa11.06□□□□□ -0.64
CPNE9-201ENST00000273027 HGSNATQ68CP4 663 aa11.06□□□□□ -0.64
CPNE9-201ENST00000273027 BTNL9Q6UXG8 535 aa11.06□□□□□ -0.64
CPNE9-201ENST00000273027 TMEM179Q6ZVK1 233 aa11.06□□□□□ -0.64
CPNE9-201ENST00000273027 APOBEC3FQ8IUX4 373 aaKnown RBP11.06□□□□□ -0.64
CPNE9-201ENST00000273027 SYCE1Q8N0S2 351 aa11.06□□□□□ -0.64
CPNE9-201ENST00000273027 MREGQ8N565 214 aa11.06□□□□□ -0.64
CPNE9-201ENST00000273027 WHAMMQ8TF30 809 aa11.06□□□□□ -0.64
CPNE9-201ENST00000273027 OTUD5Q96G74 571 aa11.06□□□□□ -0.64
CPNE9-201ENST00000273027 WNK4Q96J92 1243 aa11.06□□□□□ -0.64
CPNE9-201ENST00000273027 RUFY1Q96T51 708 aa11.06□□□□□ -0.64
CPNE9-201ENST00000273027 MKNK1Q9BUB5 465 aa11.06□□□□□ -0.64
CPNE9-201ENST00000273027 KCTD10Q9H3F6 313 aa11.06□□□□□ -0.64
CPNE9-201ENST00000273027 ZCCHC17Q9NP64 241 aaKnown RBP11.06□□□□□ -0.64
CPNE9-201ENST00000273027 FAM207AQ9NSI2 230 aaPredicted RBP11.06□□□□□ -0.64
CPNE9-201ENST00000273027 STIM2Q9P246 746 aa11.06□□□□□ -0.64
CPNE9-201ENST00000273027 TRIM10Q9UDY6 481 aa11.06□□□□□ -0.64
CPNE9-201ENST00000273027 PCDHA2Q9Y5H9 948 aa11.06□□□□□ -0.64
CPNE9-201ENST00000273027 FRMPD2Q68DX3 1309 aaPredicted RBP11.06□□□□□ -0.64
CPNE9-201ENST00000273027 CENPFP49454 3210 aa11.05□□□□□ -0.64
CPNE9-201ENST00000273027 GOLGA6BA6NDN3 693 aa11.05□□□□□ -0.64
CPNE9-201ENST00000273027 ERICH4A6NGS2 130 aa11.05□□□□□ -0.64
CPNE9-201ENST00000273027 PIK3CDO00329 1044 aa11.05□□□□□ -0.64
CPNE9-201ENST00000273027 HSF2BPO75031 334 aa11.05□□□□□ -0.64
CPNE9-201ENST00000273027 RNF40O75150 1001 aa11.05□□□□□ -0.64
CPNE9-201ENST00000273027 FLOT1O75955 427 aa11.05□□□□□ -0.64
CPNE9-201ENST00000273027 PRPF6O94906 941 aaKnown RBP11.05□□□□□ -0.64
CPNE9-201ENST00000273027 ZBTB48P10074 688 aaPredicted RBP11.05□□□□□ -0.64
CPNE9-201ENST00000273027 RFX1P22670 979 aa11.05□□□□□ -0.64
CPNE9-201ENST00000273027 SREBF1P36956 1147 aa11.05□□□□□ -0.64
CPNE9-201ENST00000273027 SLC12A3P55017 1021 aa11.05□□□□□ -0.64
CPNE9-201ENST00000273027 KLHL30Q0D2K2 578 aa11.05□□□□□ -0.64
CPNE9-201ENST00000273027 MYBPC2Q14324 1141 aa11.05□□□□□ -0.64
CPNE9-201ENST00000273027 ASIC2Q16515 512 aa11.05□□□□□ -0.64
CPNE9-201ENST00000273027 KNOP1Q1ED39 458 aaKnown RBP11.05□□□□□ -0.64
CPNE9-201ENST00000273027 HERC4Q5GLZ8 1057 aaPredicted RBP11.05□□□□□ -0.64
CPNE9-201ENST00000273027 C8orf74Q6P047 294 aa11.05□□□□□ -0.64
CPNE9-201ENST00000273027 CHRDL2Q6WN34 429 aa11.05□□□□□ -0.64
CPNE9-201ENST00000273027 GPBP1Q86WP2 473 aa11.05□□□□□ -0.64
CPNE9-201ENST00000273027 SPATS2Q86XZ4 545 aaKnown RBP11.05□□□□□ -0.64
CPNE9-201ENST00000273027 KIAA0825Q8IV33 1275 aa11.05□□□□□ -0.64
CPNE9-201ENST00000273027 FAM76AQ8TAV0 307 aa11.05□□□□□ -0.64
CPNE9-201ENST00000273027 CRYGNQ8WXF5 182 aa11.05□□□□□ -0.64
CPNE9-201ENST00000273027 TAF4BQ92750 862 aa11.05□□□□□ -0.64
CPNE9-201ENST00000273027 ZNF333Q96JL9 665 aa11.05□□□□□ -0.64
CPNE9-201ENST00000273027 TRIM34Q9BYJ4 488 aa11.05□□□□□ -0.64
CPNE9-201ENST00000273027 DEFB129Q9H1M3 183 aa11.05□□□□□ -0.64
CPNE9-201ENST00000273027 TUFT1Q9NNX1 390 aa11.05□□□□□ -0.64
CPNE9-201ENST00000273027 OLFML3Q9NRN5 406 aa11.05□□□□□ -0.64
CPNE9-201ENST00000273027 TYW1Q9NV66 732 aaKnown RBP11.05□□□□□ -0.64
CPNE9-201ENST00000273027 ARMCX3Q9UH62 379 aaPredicted RBP11.05□□□□□ -0.64
CPNE9-201ENST00000273027 FAN1Q9Y2M0 1017 aa11.05□□□□□ -0.64
CPNE9-201ENST00000273027 PCDHA1Q9Y5I3 950 aa11.05□□□□□ -0.64
CPNE9-201ENST00000273027 SZT2Q5T011 3432 aa11.04□□□□□ -0.64
CPNE9-201ENST00000273027 SPDYE3A6NKU9 549 aa11.04□□□□□ -0.64
CPNE9-201ENST00000273027 CCDC188H7C350 402 aa11.04□□□□□ -0.64
CPNE9-201ENST00000273027 SHOX2O60902 331 aaPredicted RBP11.04□□□□□ -0.64
CPNE9-201ENST00000273027 PPFIA4O75335 1185 aa11.04□□□□□ -0.64
CPNE9-201ENST00000273027 ENTPD3O75355 529 aa11.04□□□□□ -0.64
CPNE9-201ENST00000273027 MOCS3O95396 460 aa11.04□□□□□ -0.64
CPNE9-201ENST00000273027 SYF2O95926 243 aaKnown RBP11.04□□□□□ -0.64
CPNE9-201ENST00000273027 AFPP02771 609 aaKnown RBP11.04□□□□□ -0.64
CPNE9-201ENST00000273027 KRT18P05783 430 aaKnown RBP11.04□□□□□ -0.64
CPNE9-201ENST00000273027 SLC1A4P43007 532 aa11.04□□□□□ -0.64
CPNE9-201ENST00000273027 KLK7P49862 253 aa11.04□□□□□ -0.64
CPNE9-201ENST00000273027 CAP1Q01518 475 aa11.04□□□□□ -0.64
CPNE9-201ENST00000273027 CYP27A1Q02318 531 aa11.04□□□□□ -0.64
CPNE9-201ENST00000273027 ADAM9Q13443 819 aa11.04□□□□□ -0.64
CPNE9-201ENST00000273027 CERKLQ49MI3 558 aaPredicted RBP11.04□□□□□ -0.64
CPNE9-201ENST00000273027 MEI1Q5TIA1 1274 aa11.04□□□□□ -0.64
CPNE9-201ENST00000273027 EMC10Q5UCC4 262 aa11.04□□□□□ -0.64
CPNE9-201ENST00000273027 STRIP1Q5VSL9 837 aa11.04□□□□□ -0.64
CPNE9-201ENST00000273027 KLHDC7AQ5VTJ3 777 aa11.04□□□□□ -0.64
CPNE9-201ENST00000273027 CDC42EP5Q6NZY7 148 aa11.04□□□□□ -0.64
CPNE9-201ENST00000273027 TATDN1Q6P1N9 297 aa11.04□□□□□ -0.64
CPNE9-201ENST00000273027 FBXO11Q86XK2 927 aa11.04□□□□□ -0.64
CPNE9-201ENST00000273027 CD302Q8IX05 232 aa11.04□□□□□ -0.64
CPNE9-201ENST00000273027 LRRC47Q8N1G4 583 aaKnown RBP11.04□□□□□ -0.64
CPNE9-201ENST00000273027 CAPZA3Q96KX2 299 aa11.04□□□□□ -0.64
CPNE9-201ENST00000273027 SH3GL2Q99962 352 aa11.04□□□□□ -0.64
CPNE9-201ENST00000273027 HDAC6Q9UBN7 1215 aa11.04□□□□□ -0.64
CPNE9-201ENST00000273027 KIAA1024Q9UPX6 916 aa11.04□□□□□ -0.64
CPNE9-201ENST00000273027 ATRNL1Q5VV63 1379 aa11.03□□□□□ -0.64
CPNE9-201ENST00000273027 MYH10P35580 1976 aa11.03□□□□□ -0.64
CPNE9-201ENST00000273027 GOLGA6CA6NDK9 693 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms