RNA–Protein interactions for RNA: ENST00000269051.8

RHBDL3-201, Transcript of rhomboid like 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RHBDL3, Length 4,661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3-201ENST00000269051 ISCUQ9H1K1 167 aa13.12□□□□□ -0.31
RHBDL3-201ENST00000269051 TXNDC9O14530 226 aa13.11□□□□□ -0.31
RHBDL3-201ENST00000269051 SKIP12755 728 aa13.11□□□□□ -0.31
RHBDL3-201ENST00000269051 PTGISQ16647 500 aa13.11□□□□□ -0.31
RHBDL3-201ENST00000269051 RASIP1Q5U651 963 aa13.11□□□□□ -0.31
RHBDL3-201ENST00000269051 TMC4Q7Z404 712 aa13.11□□□□□ -0.31
RHBDL3-201ENST00000269051 NEDD1Q8NHV4 660 aa13.11□□□□□ -0.31
RHBDL3-201ENST00000269051 MORC4Q8TE76 937 aa13.11□□□□□ -0.31
RHBDL3-201ENST00000269051 NSUN4Q96CB9 384 aaKnown RBP13.11□□□□□ -0.31
RHBDL3-201ENST00000269051 DIP2BQ9P265 1576 aa13.11□□□□□ -0.31
RHBDL3-201ENST00000269051 ARHGAP42A6NI28 874 aa13.11□□□□□ -0.31
RHBDL3-201ENST00000269051 TDP2O95551 362 aa13.11□□□□□ -0.31
RHBDL3-201ENST00000269051 POLR2BP30876 1174 aaKnown RBP13.11□□□□□ -0.31
RHBDL3-201ENST00000269051 NSMFQ6X4W1 530 aa13.11□□□□□ -0.31
RHBDL3-201ENST00000269051 SLC44A5Q8NCS7 719 aa13.11□□□□□ -0.31
RHBDL3-201ENST00000269051 PCIF1Q9H4Z3 704 aa13.11□□□□□ -0.31
RHBDL3-201ENST00000269051 POTEB3A0JP26 581 aa13.11□□□□□ -0.31
RHBDL3-201ENST00000269051 POTECB2RU33 542 aa13.11□□□□□ -0.31
RHBDL3-201ENST00000269051 STK10O94804 968 aaKnown RBP13.11□□□□□ -0.31
RHBDL3-201ENST00000269051 ALDH1B1P30837 517 aa13.11□□□□□ -0.31
RHBDL3-201ENST00000269051 KLK7P49862 253 aa13.11□□□□□ -0.31
RHBDL3-201ENST00000269051 NR1H3Q13133 447 aa13.11□□□□□ -0.31
RHBDL3-201ENST00000269051 PPP2R5AQ15172 486 aa13.11□□□□□ -0.31
RHBDL3-201ENST00000269051 LLGL1Q15334 1064 aa13.11□□□□□ -0.31
RHBDL3-201ENST00000269051 POTEBQ6S5H4 581 aa13.11□□□□□ -0.31
RHBDL3-201ENST00000269051 USP38Q8NB14 1042 aa13.11□□□□□ -0.31
RHBDL3-201ENST00000269051 CEP95Q96GE4 821 aa13.11□□□□□ -0.31
RHBDL3-201ENST00000269051 RNPC3Q96LT9 517 aaKnown RBP13.11□□□□□ -0.31
RHBDL3-201ENST00000269051 FAM20AQ96MK3 541 aa13.11□□□□□ -0.31
RHBDL3-201ENST00000269051 CXorf56Q9H5V9 222 aa13.11□□□□□ -0.31
RHBDL3-201ENST00000269051 PFASO15067 1338 aa13.11□□□□□ -0.31
RHBDL3-201ENST00000269051 ABCB11O95342 1321 aa13.11□□□□□ -0.31
RHBDL3-201ENST00000269051 RAD51CO43502 376 aa13.1□□□□□ -0.31
RHBDL3-201ENST00000269051 GGPS1O95749 300 aa13.1□□□□□ -0.31
RHBDL3-201ENST00000269051 BAG2O95816 211 aa13.1□□□□□ -0.31
RHBDL3-201ENST00000269051 CA4P22748 312 aa13.1□□□□□ -0.31
RHBDL3-201ENST00000269051 MAP7Q14244 749 aa13.1□□□□□ -0.31
RHBDL3-201ENST00000269051 TRIM42Q8IWZ5 723 aa13.1□□□□□ -0.31
RHBDL3-201ENST00000269051 LACRTQ9GZZ8 138 aa13.1□□□□□ -0.31
RHBDL3-201ENST00000269051 SMARCAL1Q9NZC9 954 aa13.1□□□□□ -0.31
RHBDL3-201ENST00000269051 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.1□□□□□ -0.31
RHBDL3-201ENST00000269051 ZBED4O75132 1171 aa13.1□□□□□ -0.31
RHBDL3-201ENST00000269051 HERVK_113P62684 666 aa13.1□□□□□ -0.31
RHBDL3-201ENST00000269051 APBB1IPQ7Z5R6 666 aaPredicted RBP13.1□□□□□ -0.31
RHBDL3-201ENST00000269051 MCF2L2Q86YR7 1114 aa13.1□□□□□ -0.31
RHBDL3-201ENST00000269051 C3orf20Q8ND61 904 aa13.1□□□□□ -0.31
RHBDL3-201ENST00000269051 ANKS1AQ92625 1134 aa13.1□□□□□ -0.31
RHBDL3-201ENST00000269051 CYFIP2Q96F07 1278 aa13.1□□□□□ -0.31
RHBDL3-201ENST00000269051 TMEM60Q9H2L4 133 aa13.1□□□□□ -0.31
RHBDL3-201ENST00000269051 MYMKA6NI61 221 aa13.1□□□□□ -0.31
RHBDL3-201ENST00000269051 AGTP01019 485 aa13.1□□□□□ -0.31
RHBDL3-201ENST00000269051 INHBAP08476 426 aa13.1□□□□□ -0.31
RHBDL3-201ENST00000269051 SPARCL1Q14515 664 aa13.1□□□□□ -0.31
RHBDL3-201ENST00000269051 DRAP1Q14919 205 aaPredicted RBP13.1□□□□□ -0.31
RHBDL3-201ENST00000269051 DEPTORQ8TB45 409 aa13.1□□□□□ -0.31
RHBDL3-201ENST00000269051 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.1□□□□□ -0.31
RHBDL3-201ENST00000269051 TMEM51Q9NW97 253 aa13.1□□□□□ -0.31
RHBDL3-201ENST00000269051 SCOCQ9UIL1 159 aa13.1□□□□□ -0.31
RHBDL3-201ENST00000269051 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.1□□□□□ -0.31
RHBDL3-201ENST00000269051 PDXKO00764 312 aa13.1□□□□□ -0.31
RHBDL3-201ENST00000269051 LMNAP02545 664 aaKnown RBP13.1□□□□□ -0.31
RHBDL3-201ENST00000269051 RFX1P22670 979 aa13.1□□□□□ -0.31
RHBDL3-201ENST00000269051 SEC24CP53992 1094 aa13.1□□□□□ -0.31
RHBDL3-201ENST00000269051 FAM98CQ17RN3 349 aaKnown RBP13.1□□□□□ -0.31
RHBDL3-201ENST00000269051 PDXDC2PQ6P474 469 aa13.1□□□□□ -0.31
RHBDL3-201ENST00000269051 PPP4R1Q8TF05 950 aa13.1□□□□□ -0.31
RHBDL3-201ENST00000269051 SEC16BQ96JE7 1060 aa13.1□□□□□ -0.31
RHBDL3-201ENST00000269051 TRIM4Q9C037 500 aa13.1□□□□□ -0.31
RHBDL3-201ENST00000269051 DNAJC5Q9H3Z4 198 aa13.1□□□□□ -0.31
RHBDL3-201ENST00000269051 STAM2O75886 525 aa13.09□□□□□ -0.31
RHBDL3-201ENST00000269051 BBOX1O75936 387 aa13.09□□□□□ -0.31
RHBDL3-201ENST00000269051 BMP3P12645 472 aa13.09□□□□□ -0.31
RHBDL3-201ENST00000269051 CASP7P55210 303 aa13.09□□□□□ -0.31
RHBDL3-201ENST00000269051 MYO1EQ12965 1108 aa13.09□□□□□ -0.31
RHBDL3-201ENST00000269051 ZNF211Q13398 564 aaPredicted RBP13.09□□□□□ -0.31
RHBDL3-201ENST00000269051 TRIP13Q15645 432 aaPredicted RBP13.09□□□□□ -0.31
RHBDL3-201ENST00000269051 TTI2Q6NXR4 508 aa13.09□□□□□ -0.31
RHBDL3-201ENST00000269051 DHX36Q9H2U1 1008 aaKnown RBP13.09□□□□□ -0.31
RHBDL3-201ENST00000269051 SGK1O00141 431 aa13.09□□□□□ -0.31
RHBDL3-201ENST00000269051 MSH2P43246 934 aa13.09□□□□□ -0.31
RHBDL3-201ENST00000269051 AARSP49588 968 aaKnown RBP eCLIP13.09□□□□□ -0.31
RHBDL3-201ENST00000269051 PLCB4Q15147 1175 aa13.09□□□□□ -0.31
RHBDL3-201ENST00000269051 RNF207Q6ZRF8 634 aa13.09□□□□□ -0.31
RHBDL3-201ENST00000269051 GLYCTKQ8IVS8 523 aa13.09□□□□□ -0.31
RHBDL3-201ENST00000269051 PDCD7Q8N8D1 485 aaKnown RBP13.09□□□□□ -0.31
RHBDL3-201ENST00000269051 CELF1Q92879 486 aaKnown RBP13.09□□□□□ -0.31
RHBDL3-201ENST00000269051 SAAL1Q96ER3 474 aa13.09□□□□□ -0.31
RHBDL3-201ENST00000269051 COL15A1P39059 1388 aa13.09□□□□□ -0.31
RHBDL3-201ENST00000269051 NOL3O60936 208 aaKnown RBP13.09□□□□□ -0.31
RHBDL3-201ENST00000269051 KLRC1P26715 233 aa13.09□□□□□ -0.31
RHBDL3-201ENST00000269051 HDLBPQ00341 1268 aaKnown RBP13.09□□□□□ -0.31
RHBDL3-201ENST00000269051 MDM2Q00987 491 aaPredicted RBP13.09□□□□□ -0.31
RHBDL3-201ENST00000269051 MKRN3Q13064 507 aaKnown RBP13.09□□□□□ -0.31
RHBDL3-201ENST00000269051 GRAPQ13588 217 aa13.09□□□□□ -0.31
RHBDL3-201ENST00000269051 EDRF1Q3B7T1 1238 aa13.09□□□□□ -0.31
RHBDL3-201ENST00000269051 KIAA1755Q5JYT7 1200 aa13.09□□□□□ -0.31
RHBDL3-201ENST00000269051 CCDC137Q6PK04 289 aaKnown RBP13.09□□□□□ -0.31
RHBDL3-201ENST00000269051 ZNF34Q8IZ26 560 aa13.09□□□□□ -0.31
RHBDL3-201ENST00000269051 GRAPLQ8TC17 118 aaPredicted RBP13.09□□□□□ -0.31
RHBDL3-201ENST00000269051 GRAMD1AQ96CP6 724 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms