RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 SPATA31C2B4DYI2 1134 aa17■□□□□ 0.31
COPS3-201ENST00000268717 NRDCO43847 1150 aa17■□□□□ 0.31
COPS3-201ENST00000268717 DKC1O60832 514 aaKnown RBP eCLIP17■□□□□ 0.31
COPS3-201ENST00000268717 TBCAO75347 108 aaKnown RBP17■□□□□ 0.31
COPS3-201ENST00000268717 RGS20O76081 388 aa17■□□□□ 0.31
COPS3-201ENST00000268717 ELNP15502 786 aa17■□□□□ 0.31
COPS3-201ENST00000268717 SFPQP23246 707 aaKnown RBP eCLIP17■□□□□ 0.31
COPS3-201ENST00000268717 ALDH5A1P51649 535 aaPredicted RBP17■□□□□ 0.31
COPS3-201ENST00000268717 ZNF131P52739 623 aa17■□□□□ 0.31
COPS3-201ENST00000268717 COPB1P53618 953 aaKnown RBP17■□□□□ 0.31
COPS3-201ENST00000268717 ZCWPW2Q504Y3 356 aa17■□□□□ 0.31
COPS3-201ENST00000268717 PLEKHH3Q7Z736 793 aa17■□□□□ 0.31
COPS3-201ENST00000268717 FAM133AQ8N9E0 248 aa17■□□□□ 0.31
COPS3-201ENST00000268717 SOCS4Q8WXH5 440 aa17■□□□□ 0.31
COPS3-201ENST00000268717 HPS3Q969F9 1004 aa17■□□□□ 0.31
COPS3-201ENST00000268717 MPHOSPH6Q99547 160 aaKnown RBP17■□□□□ 0.31
COPS3-201ENST00000268717 RUSC1Q9BVN2 902 aa17■□□□□ 0.31
COPS3-201ENST00000268717 TIPINQ9BVW5 301 aa17■□□□□ 0.31
COPS3-201ENST00000268717 WRAP73Q9P2S5 460 aaPredicted RBP17■□□□□ 0.31
COPS3-201ENST00000268717 POTEB2H3BUK9 544 aa16.99■□□□□ 0.31
COPS3-201ENST00000268717 ATP9AO75110 1047 aa16.99■□□□□ 0.31
COPS3-201ENST00000268717 MYCP01106 439 aaPredicted RBP16.99■□□□□ 0.31
COPS3-201ENST00000268717 PSMC5P62195 406 aa16.99■□□□□ 0.31
COPS3-201ENST00000268717 MTFR1Q15390 333 aa16.99■□□□□ 0.31
COPS3-201ENST00000268717 BMT2Q1RMZ1 405 aa16.99■□□□□ 0.31
COPS3-201ENST00000268717 EPM2AIP1Q7L775 607 aaPredicted RBP16.99■□□□□ 0.31
COPS3-201ENST00000268717 NCAPG2Q86XI2 1143 aa16.99■□□□□ 0.31
COPS3-201ENST00000268717 CCDC112Q8NEF3 446 aa16.99■□□□□ 0.31
COPS3-201ENST00000268717 PIGOQ8TEQ8 1089 aa16.99■□□□□ 0.31
COPS3-201ENST00000268717 TMEM106CQ9BVX2 250 aa16.99■□□□□ 0.31
COPS3-201ENST00000268717 ZNFX1Q9P2E3 1918 aaKnown RBP16.99■□□□□ 0.31
COPS3-201ENST00000268717 PDE4DIPQ5VU43 2346 aa16.99■□□□□ 0.31
COPS3-201ENST00000268717 TNRC18O15417 2968 aaPredicted RBP16.99■□□□□ 0.31
COPS3-201ENST00000268717 UBE4BO95155 1302 aa16.99■□□□□ 0.31
COPS3-201ENST00000268717 NPHP3-ACAD11A0A0J9YXS1 232 aa16.99■□□□□ 0.31
COPS3-201ENST00000268717 DDX39AO00148 427 aaKnown RBP16.99■□□□□ 0.31
COPS3-201ENST00000268717 TPM2P07951 284 aa16.99■□□□□ 0.31
COPS3-201ENST00000268717 ERCC3P19447 782 aa16.99■□□□□ 0.31
COPS3-201ENST00000268717 KCNJ6P48051 423 aa16.99■□□□□ 0.31
COPS3-201ENST00000268717 MLLT1Q03111 559 aaPredicted RBP16.99■□□□□ 0.31
COPS3-201ENST00000268717 MORN1Q5T089 497 aa16.99■□□□□ 0.31
COPS3-201ENST00000268717 ZC3H3Q8IXZ2 948 aaKnown RBP16.99■□□□□ 0.31
COPS3-201ENST00000268717 BANK1Q8NDB2 785 aa16.99■□□□□ 0.31
COPS3-201ENST00000268717 USP6NLQ92738 828 aa16.99■□□□□ 0.31
COPS3-201ENST00000268717 PKD2L1Q9P0L9 805 aa16.99■□□□□ 0.31
COPS3-201ENST00000268717 PCDHA10Q9Y5I2 948 aa16.99■□□□□ 0.31
COPS3-201ENST00000268717 LOXHD1Q8IVV2 1947 aa16.98■□□□□ 0.31
COPS3-201ENST00000268717 ASTN1O14525 1302 aa16.98■□□□□ 0.31
COPS3-201ENST00000268717 A0A1W2PQC6 194 aa16.98■□□□□ 0.31
COPS3-201ENST00000268717 ARHGEF35A5YM69 484 aa16.98■□□□□ 0.31
COPS3-201ENST00000268717 LGALS16A8MUM7 142 aa16.98■□□□□ 0.31
COPS3-201ENST00000268717 N4BP3O15049 544 aa16.98■□□□□ 0.31
COPS3-201ENST00000268717 EIF3DO15371 548 aaKnown RBP eCLIP16.98■□□□□ 0.31
COPS3-201ENST00000268717 CCNE2O96020 404 aa16.98■□□□□ 0.31
COPS3-201ENST00000268717 TRIM14Q14142 442 aa16.98■□□□□ 0.31
COPS3-201ENST00000268717 EDRF1Q3B7T1 1238 aa16.98■□□□□ 0.31
COPS3-201ENST00000268717 WDR78Q5VTH9 848 aa16.98■□□□□ 0.31
COPS3-201ENST00000268717 ARMCX5Q6P1M9 558 aa16.98■□□□□ 0.31
COPS3-201ENST00000268717 SCFD1Q8WVM8 642 aa16.98■□□□□ 0.31
COPS3-201ENST00000268717 CEP63Q96MT8 703 aa16.98■□□□□ 0.31
COPS3-201ENST00000268717 PARVGQ9HBI0 331 aa16.98■□□□□ 0.31
COPS3-201ENST00000268717 JPH1Q9HDC5 661 aaPredicted RBP16.98■□□□□ 0.31
COPS3-201ENST00000268717 ANKEF1Q9NU02 776 aa16.98■□□□□ 0.31
COPS3-201ENST00000268717 SPTLC3Q9NUV7 552 aa16.98■□□□□ 0.31
COPS3-201ENST00000268717 SAMM50Q9Y512 469 aa16.98■□□□□ 0.31
COPS3-201ENST00000268717 COBLO75128 1261 aa16.97■□□□□ 0.31
COPS3-201ENST00000268717 INHAP05111 366 aa16.97■□□□□ 0.31
COPS3-201ENST00000268717 XRCC5P13010 732 aaKnown RBP16.97■□□□□ 0.31
COPS3-201ENST00000268717 CYP2B6P20813 491 aa16.97■□□□□ 0.31
COPS3-201ENST00000268717 CCZ1BP86790 482 aa16.97■□□□□ 0.31
COPS3-201ENST00000268717 CCZ1P86791 482 aaPredicted RBP16.97■□□□□ 0.31
COPS3-201ENST00000268717 FKBP3Q00688 224 aaKnown RBP16.97■□□□□ 0.31
COPS3-201ENST00000268717 LRMPQ12912 555 aa16.97■□□□□ 0.31
COPS3-201ENST00000268717 LRRC55Q6ZSA7 311 aa16.97■□□□□ 0.31
COPS3-201ENST00000268717 SFR1Q86XK3 245 aa16.97■□□□□ 0.31
COPS3-201ENST00000268717 CNOT6LQ96LI5 555 aaKnown RBP16.97■□□□□ 0.31
COPS3-201ENST00000268717 KCTD10Q9H3F6 313 aa16.97■□□□□ 0.31
COPS3-201ENST00000268717 PYCARDQ9ULZ3 195 aa16.97■□□□□ 0.31
COPS3-201ENST00000268717 ZNF236Q9UL36 1845 aa16.97■□□□□ 0.31
COPS3-201ENST00000268717 DNAJC25-GNG10A0A024R161 153 aa16.96■□□□□ 0.31
COPS3-201ENST00000268717 FAM13AO94988 1023 aa16.96■□□□□ 0.31
COPS3-201ENST00000268717 GNA14O95837 355 aa16.96■□□□□ 0.31
COPS3-201ENST00000268717 TGFB3P10600 412 aa16.96■□□□□ 0.31
COPS3-201ENST00000268717 MAPTP10636 758 aaKnown RBP16.96■□□□□ 0.31
COPS3-201ENST00000268717 CCL5P13501 91 aa16.96■□□□□ 0.31
COPS3-201ENST00000268717 RGS2P41220 211 aa16.96■□□□□ 0.31
COPS3-201ENST00000268717 RARRES1P49788 294 aa16.96■□□□□ 0.31
COPS3-201ENST00000268717 CNTN2Q02246 1040 aa16.96■□□□□ 0.31
COPS3-201ENST00000268717 CACNB1Q02641 598 aaPredicted RBP16.96■□□□□ 0.31
COPS3-201ENST00000268717 GRB14Q14449 540 aa16.96■□□□□ 0.31
COPS3-201ENST00000268717 ATP6V0A1Q93050 837 aa16.96■□□□□ 0.31
COPS3-201ENST00000268717 KCND1Q9NSA2 647 aa16.96■□□□□ 0.31
COPS3-201ENST00000268717 SLC9A2Q9UBY0 812 aa16.96■□□□□ 0.31
COPS3-201ENST00000268717 TRAF3IP3Q9Y228 551 aa16.96■□□□□ 0.31
COPS3-201ENST00000268717 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.96■□□□□ 0.31
COPS3-201ENST00000268717 IVNS1ABPQ9Y6Y0 642 aa16.96■□□□□ 0.31
COPS3-201ENST00000268717 KIAA1217Q5T5P2 1943 aa16.96■□□□□ 0.31
COPS3-201ENST00000268717 SOWAHBA6NEL2 793 aa16.96■□□□□ 0.3
COPS3-201ENST00000268717 SLC15A5A6NIM6 579 aa16.96■□□□□ 0.3
COPS3-201ENST00000268717 TEX33O43247 280 aa16.96■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms