RNA–Protein interactions for RNA: ENST00000262395.9

TRAF4-201, Transcript of TNF receptor associated factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF4, Length 2,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-201ENST00000262395 FLOT1O75955 427 aa19.57■□□□□ 0.72
TRAF4-201ENST00000262395 SHBGP04278 402 aa19.57■□□□□ 0.72
TRAF4-201ENST00000262395 ZBTB48P10074 688 aaPredicted RBP19.57■□□□□ 0.72
TRAF4-201ENST00000262395 GALCP54803 685 aa19.57■□□□□ 0.72
TRAF4-201ENST00000262395 SEPT2Q15019 361 aa19.57■□□□□ 0.72
TRAF4-201ENST00000262395 PRR16Q569H4 304 aa19.57■□□□□ 0.72
TRAF4-201ENST00000262395 AADACL2Q6P093 401 aa19.57■□□□□ 0.72
TRAF4-201ENST00000262395 RUFY4Q6ZNE9 571 aa19.57■□□□□ 0.72
TRAF4-201ENST00000262395 CATSPER3Q86XQ3 398 aa19.57■□□□□ 0.72
TRAF4-201ENST00000262395 KSR1Q8IVT5 923 aa19.57■□□□□ 0.72
TRAF4-201ENST00000262395 SCLT1Q96NL6 688 aa19.57■□□□□ 0.72
TRAF4-201ENST00000262395 PAGR1Q9BTK6 254 aa19.57■□□□□ 0.72
TRAF4-201ENST00000262395 CLK2P49760 499 aaKnown RBP19.56■□□□□ 0.72
TRAF4-201ENST00000262395 MMP14P50281 582 aa19.56■□□□□ 0.72
TRAF4-201ENST00000262395 SLC12A3P55017 1021 aa19.56■□□□□ 0.72
TRAF4-201ENST00000262395 SHROOM1Q2M3G4 852 aaPredicted RBP19.56■□□□□ 0.72
TRAF4-201ENST00000262395 PPP1R9AQ9ULJ8 1098 aa19.56■□□□□ 0.72
TRAF4-201ENST00000262395 KDM3AQ9Y4C1 1321 aa19.56■□□□□ 0.72
TRAF4-201ENST00000262395 BUB1BO60566 1050 aaPredicted RBP19.56■□□□□ 0.72
TRAF4-201ENST00000262395 CAND2O75155 1236 aa19.56■□□□□ 0.72
TRAF4-201ENST00000262395 CDR1P51861 262 aa19.56■□□□□ 0.72
TRAF4-201ENST00000262395 BYSLQ13895 437 aaKnown RBP19.56■□□□□ 0.72
TRAF4-201ENST00000262395 GIT2Q14161 759 aa19.56■□□□□ 0.72
TRAF4-201ENST00000262395 IFI16Q16666 785 aaKnown RBP19.56■□□□□ 0.72
TRAF4-201ENST00000262395 KNOP1Q1ED39 458 aaKnown RBP19.56■□□□□ 0.72
TRAF4-201ENST00000262395 UBAP2Q5T6F2 1119 aaKnown RBP19.56■□□□□ 0.72
TRAF4-201ENST00000262395 NT5DC3Q86UY8 548 aa19.56■□□□□ 0.72
TRAF4-201ENST00000262395 IGSF9BQ9UPX0 1349 aa19.55■□□□□ 0.72
TRAF4-201ENST00000262395 RDXP35241 583 aaKnown RBP19.55■□□□□ 0.72
TRAF4-201ENST00000262395 SMTNP53814 917 aa19.55■□□□□ 0.72
TRAF4-201ENST00000262395 GRAPQ13588 217 aa19.55■□□□□ 0.72
TRAF4-201ENST00000262395 GRAPLQ8TC17 118 aaPredicted RBP19.55■□□□□ 0.72
TRAF4-201ENST00000262395 ARHGEF1Q92888 912 aaKnown RBP19.55■□□□□ 0.72
TRAF4-201ENST00000262395 UTP11Q9Y3A2 253 aaKnown RBP19.55■□□□□ 0.72
TRAF4-201ENST00000262395 F8VZ95 297 aa19.55■□□□□ 0.72
TRAF4-201ENST00000262395 RASSF9O75901 435 aa19.55■□□□□ 0.72
TRAF4-201ENST00000262395 POLD1P28340 1107 aa19.55■□□□□ 0.72
TRAF4-201ENST00000262395 EPHA7Q15375 998 aa19.55■□□□□ 0.72
TRAF4-201ENST00000262395 CACNA2D3Q8IZS8 1091 aa19.55■□□□□ 0.72
TRAF4-201ENST00000262395 SIX2Q9NPC8 291 aa19.55■□□□□ 0.72
TRAF4-201ENST00000262395 DDX4Q9NQI0 724 aaKnown RBP19.55■□□□□ 0.72
TRAF4-201ENST00000262395 CHORDC1Q9UHD1 332 aaPredicted RBP19.55■□□□□ 0.72
TRAF4-201ENST00000262395 FAM196BA6NMK8 535 aa19.55■□□□□ 0.72
TRAF4-201ENST00000262395 GCNT3O95395 438 aa19.55■□□□□ 0.72
TRAF4-201ENST00000262395 BIRC3Q13489 604 aa19.55■□□□□ 0.72
TRAF4-201ENST00000262395 E2F5Q15329 346 aa19.55■□□□□ 0.72
TRAF4-201ENST00000262395 FAM98CQ17RN3 349 aaKnown RBP19.55■□□□□ 0.72
TRAF4-201ENST00000262395 CCDC26Q8TAB7 109 aa19.55■□□□□ 0.72
TRAF4-201ENST00000262395 LNX1Q8TBB1 728 aaPredicted RBP19.55■□□□□ 0.72
TRAF4-201ENST00000262395 SELENOSQ9BQE4 189 aa19.55■□□□□ 0.72
TRAF4-201ENST00000262395 ERVK-5Q9HDB9 667 aa19.55■□□□□ 0.72
TRAF4-201ENST00000262395 SPDYE3A6NKU9 549 aa19.54■□□□□ 0.72
TRAF4-201ENST00000262395 hCG_1984214I3L0E3 225 aa19.54■□□□□ 0.72
TRAF4-201ENST00000262395 MKRN4PQ13434 485 aaPredicted RBP19.54■□□□□ 0.72
TRAF4-201ENST00000262395 EDRF1Q3B7T1 1238 aa19.54■□□□□ 0.72
TRAF4-201ENST00000262395 ZNF713Q8N859 430 aaPredicted RBP19.54■□□□□ 0.72
TRAF4-201ENST00000262395 C1orf131Q8NDD1 294 aaKnown RBP19.54■□□□□ 0.72
TRAF4-201ENST00000262395 SLC35G2Q8TBE7 412 aa19.54■□□□□ 0.72
TRAF4-201ENST00000262395 COL14A1Q05707 1796 aaKnown RBP19.54■□□□□ 0.72
TRAF4-201ENST00000262395 ZBTB5O15062 677 aa19.54■□□□□ 0.72
TRAF4-201ENST00000262395 NR3C1P04150 777 aa19.54■□□□□ 0.72
TRAF4-201ENST00000262395 CCDC172P0C7W6 258 aa19.54■□□□□ 0.72
TRAF4-201ENST00000262395 GSCP56915 257 aaPredicted RBP19.54■□□□□ 0.72
TRAF4-201ENST00000262395 ANKRD20A8PQ5CZ79 823 aa19.54■□□□□ 0.72
TRAF4-201ENST00000262395 DCAF12L1Q5VU92 463 aa19.54■□□□□ 0.72
TRAF4-201ENST00000262395 BANK1Q8NDB2 785 aa19.54■□□□□ 0.72
TRAF4-201ENST00000262395 CALR3Q96L12 384 aaKnown RBP19.54■□□□□ 0.72
TRAF4-201ENST00000262395 PSMD1Q99460 953 aa19.54■□□□□ 0.72
TRAF4-201ENST00000262395 P2RX7Q99572 595 aaKnown RBP19.54■□□□□ 0.72
TRAF4-201ENST00000262395 MXD3Q9BW11 206 aa19.54■□□□□ 0.72
TRAF4-201ENST00000262395 CDCA7Q9BWT1 371 aaPredicted RBP19.54■□□□□ 0.72
TRAF4-201ENST00000262395 TMOD4Q9NZQ9 345 aa19.54■□□□□ 0.72
TRAF4-201ENST00000262395 STXBP5LQ9Y2K9 1186 aa19.54■□□□□ 0.72
TRAF4-201ENST00000262395 PCDHA1Q9Y5I3 950 aa19.54■□□□□ 0.72
TRAF4-201ENST00000262395 EVI5O60447 810 aa19.53■□□□□ 0.72
TRAF4-201ENST00000262395 TTLL1O95922 423 aa19.53■□□□□ 0.72
TRAF4-201ENST00000262395 NT5C2P49902 561 aa19.53■□□□□ 0.72
TRAF4-201ENST00000262395 PLTPP55058 493 aa19.53■□□□□ 0.72
TRAF4-201ENST00000262395 C10orf76Q5T2E6 689 aa19.53■□□□□ 0.72
TRAF4-201ENST00000262395 AMFRQ9UKV5 643 aa19.53■□□□□ 0.72
TRAF4-201ENST00000262395 SNX24Q9Y343 169 aa19.53■□□□□ 0.72
TRAF4-201ENST00000262395 BTNL10A8MVZ5 291 aa19.53■□□□□ 0.72
TRAF4-201ENST00000262395 CES2O00748 559 aa19.53■□□□□ 0.72
TRAF4-201ENST00000262395 RIMBP2O15034 1052 aa19.53■□□□□ 0.72
TRAF4-201ENST00000262395 CTNND1O60716 968 aaKnown RBP19.53■□□□□ 0.72
TRAF4-201ENST00000262395 GTF2IP78347 998 aa19.53■□□□□ 0.72
TRAF4-201ENST00000262395 HYIQ5T013 277 aa19.53■□□□□ 0.72
TRAF4-201ENST00000262395 FOXR2Q6PJQ5 311 aa19.53■□□□□ 0.72
TRAF4-201ENST00000262395 FRMD5Q7Z6J6 570 aa19.53■□□□□ 0.72
TRAF4-201ENST00000262395 SLC35C1Q96A29 364 aa19.53■□□□□ 0.72
TRAF4-201ENST00000262395 FMO2Q99518 471 aa19.53■□□□□ 0.72
TRAF4-201ENST00000262395 BHMT2Q9H2M3 363 aa19.53■□□□□ 0.72
TRAF4-201ENST00000262395 TAS2R14Q9NYV8 317 aa19.53■□□□□ 0.72
TRAF4-201ENST00000262395 DAGLAQ9Y4D2 1042 aa19.53■□□□□ 0.72
TRAF4-201ENST00000262395 BZW2Q9Y6E2 419 aaKnown RBP19.53■□□□□ 0.72
TRAF4-201ENST00000262395 CCDC188H7C350 402 aa19.52■□□□□ 0.72
TRAF4-201ENST00000262395 MTMR3Q13615 1198 aa19.52■□□□□ 0.72
TRAF4-201ENST00000262395 LLGL1Q15334 1064 aa19.52■□□□□ 0.72
TRAF4-201ENST00000262395 CYB5D1Q6P9G0 228 aa19.52■□□□□ 0.72
TRAF4-201ENST00000262395 VPS36Q86VN1 386 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms