RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 TRPC6Q9Y210 931 aa17.63■□□□□ 0.41
CCDC90B-201ENST00000260054 KINO60870 393 aaKnown RBP17.62■□□□□ 0.41
CCDC90B-201ENST00000260054 SSBP05455 408 aaKnown RBP eCLIP17.62■□□□□ 0.41
CCDC90B-201ENST00000260054 ACLYP53396 1101 aa17.62■□□□□ 0.41
CCDC90B-201ENST00000260054 CHMP4BP1P59074 171 aa17.62■□□□□ 0.41
CCDC90B-201ENST00000260054 XKR9Q5GH70 373 aa17.62■□□□□ 0.41
CCDC90B-201ENST00000260054 OTUD6AQ7L8S5 288 aa17.62■□□□□ 0.41
CCDC90B-201ENST00000260054 GRAMD1CQ8IYS0 662 aa17.62■□□□□ 0.41
CCDC90B-201ENST00000260054 CEP170P1Q96L14 293 aa17.62■□□□□ 0.41
CCDC90B-201ENST00000260054 TSEN34Q9BSV6 310 aaKnown RBP17.62■□□□□ 0.41
CCDC90B-201ENST00000260054 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.61■□□□□ 0.41
CCDC90B-201ENST00000260054 MOXD2PA6NHM9 499 aa17.61■□□□□ 0.41
CCDC90B-201ENST00000260054 ZBTB42B2RXF5 422 aa17.61■□□□□ 0.41
CCDC90B-201ENST00000260054 HBP1O60381 514 aa17.61■□□□□ 0.41
CCDC90B-201ENST00000260054 TARBP2Q15633 366 aaKnown RBP17.61■□□□□ 0.41
CCDC90B-201ENST00000260054 MTERF2Q49AM1 385 aa17.61■□□□□ 0.41
CCDC90B-201ENST00000260054 SV2BQ7L1I2 683 aa17.61■□□□□ 0.41
CCDC90B-201ENST00000260054 SH3RF1Q7Z6J0 888 aa17.61■□□□□ 0.41
CCDC90B-201ENST00000260054 PAGE5Q96GU1 130 aa17.61■□□□□ 0.41
CCDC90B-201ENST00000260054 CEP89Q96ST8 783 aa17.61■□□□□ 0.41
CCDC90B-201ENST00000260054 KATNAL1Q9BW62 490 aa17.61■□□□□ 0.41
CCDC90B-201ENST00000260054 CYP26B1Q9NR63 512 aa17.61■□□□□ 0.41
CCDC90B-201ENST00000260054 SCN10AQ9Y5Y9 1956 aa17.61■□□□□ 0.41
CCDC90B-201ENST00000260054 ARHGEF35A5YM69 484 aa17.61■□□□□ 0.41
CCDC90B-201ENST00000260054 KBTBD13C9JR72 458 aa17.61■□□□□ 0.41
CCDC90B-201ENST00000260054 DNM1LO00429 736 aa17.61■□□□□ 0.41
CCDC90B-201ENST00000260054 INSRRP14616 1297 aa17.61■□□□□ 0.41
CCDC90B-201ENST00000260054 AFMP43652 599 aa17.61■□□□□ 0.41
CCDC90B-201ENST00000260054 GJA8P48165 433 aa17.61■□□□□ 0.41
CCDC90B-201ENST00000260054 KLHL40Q2TBA0 621 aa17.61■□□□□ 0.41
CCDC90B-201ENST00000260054 TNMDQ9H2S6 317 aa17.61■□□□□ 0.41
CCDC90B-201ENST00000260054 MAGEF1Q9HAY2 307 aa17.61■□□□□ 0.41
CCDC90B-201ENST00000260054 PHF24Q9UPV7 400 aa17.61■□□□□ 0.41
CCDC90B-201ENST00000260054 TFRCP02786 760 aaKnown RBP17.6■□□□□ 0.41
CCDC90B-201ENST00000260054 SMIM10L2AP0DMW4 78 aa17.6■□□□□ 0.41
CCDC90B-201ENST00000260054 SMIM10L2BP0DMW5 78 aa17.6■□□□□ 0.41
CCDC90B-201ENST00000260054 CYP11B2P19099 503 aa17.6■□□□□ 0.41
CCDC90B-201ENST00000260054 CASP1P29466 404 aa17.6■□□□□ 0.41
CCDC90B-201ENST00000260054 MNX1P50219 401 aaPredicted RBP17.6■□□□□ 0.41
CCDC90B-201ENST00000260054 RINT1Q6NUQ1 792 aa17.6■□□□□ 0.41
CCDC90B-201ENST00000260054 PADI6Q6TGC4 694 aa17.6■□□□□ 0.41
CCDC90B-201ENST00000260054 DNAH12Q6ZR08 3092 aa17.6■□□□□ 0.41
CCDC90B-201ENST00000260054 GPBP1Q86WP2 473 aa17.6■□□□□ 0.41
CCDC90B-201ENST00000260054 TRAPPC12Q8WVT3 735 aa17.6■□□□□ 0.41
CCDC90B-201ENST00000260054 CCDC43Q96MW1 224 aaKnown RBP17.6■□□□□ 0.41
CCDC90B-201ENST00000260054 RUSC1Q9BVN2 902 aa17.6■□□□□ 0.41
CCDC90B-201ENST00000260054 GRIN2DO15399 1336 aa17.59■□□□□ 0.41
CCDC90B-201ENST00000260054 KIAA0100Q14667 2235 aaKnown RBP17.59■□□□□ 0.41
CCDC90B-201ENST00000260054 A0A1W2PQ45 241 aaPredicted RBP17.59■□□□□ 0.41
CCDC90B-201ENST00000260054 A0A1W2PQY0 241 aa17.59■□□□□ 0.41
CCDC90B-201ENST00000260054 MYMKA6NI61 221 aa17.59■□□□□ 0.41
CCDC90B-201ENST00000260054 TRAK2O60296 914 aa17.59■□□□□ 0.41
CCDC90B-201ENST00000260054 USO1O60763 962 aaKnown RBP17.59■□□□□ 0.41
CCDC90B-201ENST00000260054 CABYRO75952 493 aa17.59■□□□□ 0.41
CCDC90B-201ENST00000260054 PRR29P0C7W0 189 aa17.59■□□□□ 0.41
CCDC90B-201ENST00000260054 MDM2Q00987 491 aaPredicted RBP17.59■□□□□ 0.41
CCDC90B-201ENST00000260054 PPFIA1Q13136 1202 aa17.59■□□□□ 0.41
CCDC90B-201ENST00000260054 CAMK4Q16566 473 aa17.59■□□□□ 0.41
CCDC90B-201ENST00000260054 NBPF20Q3BBV1 942 aa17.59■□□□□ 0.41
CCDC90B-201ENST00000260054 ARSHQ5FYA8 562 aa17.59■□□□□ 0.41
CCDC90B-201ENST00000260054 C1orf186Q6ZWK4 172 aa17.59■□□□□ 0.41
CCDC90B-201ENST00000260054 CLSTN2Q9H4D0 955 aa17.59■□□□□ 0.41
CCDC90B-201ENST00000260054 BMP2KQ9NSY1 1161 aaPredicted RBP17.59■□□□□ 0.41
CCDC90B-201ENST00000260054 ARID2Q68CP9 1835 aa17.59■□□□□ 0.41
CCDC90B-201ENST00000260054 IGBP1P78318 339 aa17.58■□□□□ 0.41
CCDC90B-201ENST00000260054 HIC1Q14526 733 aa17.58■□□□□ 0.41
CCDC90B-201ENST00000260054 GRIK4Q16099 956 aa17.58■□□□□ 0.41
CCDC90B-201ENST00000260054 SKOR2Q2VWA4 1001 aaPredicted RBP17.58■□□□□ 0.41
CCDC90B-201ENST00000260054 ZNF484Q5JVG2 852 aa17.58■□□□□ 0.41
CCDC90B-201ENST00000260054 KANK3Q6NY19 840 aa17.58■□□□□ 0.41
CCDC90B-201ENST00000260054 ZBTB10Q96DT7 871 aa17.58■□□□□ 0.41
CCDC90B-201ENST00000260054 GLT1D1Q96MS3 346 aa17.58■□□□□ 0.41
CCDC90B-201ENST00000260054 TMEM106CQ9BVX2 250 aa17.58■□□□□ 0.41
CCDC90B-201ENST00000260054 TRIM9Q9C026 710 aa17.58■□□□□ 0.41
CCDC90B-201ENST00000260054 BLZF1Q9H2G9 400 aa17.58■□□□□ 0.41
CCDC90B-201ENST00000260054 SETD4Q9NVD3 440 aa17.58■□□□□ 0.41
CCDC90B-201ENST00000260054 TMEM63CQ9P1W3 806 aa17.58■□□□□ 0.41
CCDC90B-201ENST00000260054 HDAC6Q9UBN7 1215 aa17.58■□□□□ 0.41
CCDC90B-201ENST00000260054 LOXHD1Q8IVV2 1947 aa17.58■□□□□ 0.4
CCDC90B-201ENST00000260054 NPHP3-ACAD11A0A0J9YXS1 232 aa17.58■□□□□ 0.4
CCDC90B-201ENST00000260054 RAD51AP2Q09MP3 1159 aa17.58■□□□□ 0.4
CCDC90B-201ENST00000260054 PNOCQ13519 176 aa17.58■□□□□ 0.4
CCDC90B-201ENST00000260054 CUL4BQ13620 913 aa17.58■□□□□ 0.4
CCDC90B-201ENST00000260054 POSTNQ15063 836 aa17.58■□□□□ 0.4
CCDC90B-201ENST00000260054 MARCH8Q5T0T0 291 aa17.58■□□□□ 0.4
CCDC90B-201ENST00000260054 COL13A1Q5TAT6 717 aaPredicted RBP17.58■□□□□ 0.4
CCDC90B-201ENST00000260054 ELOA2Q8IYF1 753 aaPredicted RBP17.58■□□□□ 0.4
CCDC90B-201ENST00000260054 C7orf31Q8N865 590 aa17.58■□□□□ 0.4
CCDC90B-201ENST00000260054 LMBR1Q8WVP7 490 aa17.58■□□□□ 0.4
CCDC90B-201ENST00000260054 DDX12PQ92771 950 aa17.58■□□□□ 0.4
CCDC90B-201ENST00000260054 ERCC4Q92889 916 aaPredicted RBP17.58■□□□□ 0.4
CCDC90B-201ENST00000260054 NUP62CLQ9H1M0 184 aa17.58■□□□□ 0.4
CCDC90B-201ENST00000260054 DHX33Q9H6R0 707 aaKnown RBP17.58■□□□□ 0.4
CCDC90B-201ENST00000260054 XPNPEP1Q9NQW7 623 aa17.58■□□□□ 0.4
CCDC90B-201ENST00000260054 PDLIM7Q9NR12 457 aa17.58■□□□□ 0.4
CCDC90B-201ENST00000260054 COL1A2P08123 1366 aa17.58■□□□□ 0.4
CCDC90B-201ENST00000260054 NRCAMQ92823 1304 aa17.57■□□□□ 0.4
CCDC90B-201ENST00000260054 DGAT1O75907 488 aa17.57■□□□□ 0.4
CCDC90B-201ENST00000260054 HOXC8P31273 242 aa17.57■□□□□ 0.4
CCDC90B-201ENST00000260054 AMPD3Q01432 767 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms