RNA–Protein interactions for RNA: ENST00000259043.11

TRA2B-201, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-201ENST00000259043 PLEKHH3Q7Z736 793 aa7.19□□□□□ -1.26
TRA2B-201ENST00000259043 IGSF22Q8N9C0 903 aa7.19□□□□□ -1.26
TRA2B-201ENST00000259043 B3GALT1Q9Y5Z6 326 aa7.19□□□□□ -1.26
TRA2B-201ENST00000259043 PRAMEF25A6NGN4 478 aa7.18□□□□□ -1.26
TRA2B-201ENST00000259043 RASSF10A6NK89 507 aa7.18□□□□□ -1.26
TRA2B-201ENST00000259043 PPP1R12AO14974 1030 aaPredicted RBP7.18□□□□□ -1.26
TRA2B-201ENST00000259043 ZBTB48P10074 688 aaPredicted RBP7.18□□□□□ -1.26
TRA2B-201ENST00000259043 PTGS1P23219 599 aa7.18□□□□□ -1.26
TRA2B-201ENST00000259043 MC4RP32245 332 aa7.18□□□□□ -1.26
TRA2B-201ENST00000259043 ICAM4Q14773 271 aa7.18□□□□□ -1.26
TRA2B-201ENST00000259043 KBTBD2Q8IY47 623 aa7.18□□□□□ -1.26
TRA2B-201ENST00000259043 RNPC3Q96LT9 517 aaKnown RBP7.18□□□□□ -1.26
TRA2B-201ENST00000259043 ZNF747Q9BV97 191 aa7.18□□□□□ -1.26
TRA2B-201ENST00000259043 KATNBL1Q9H079 304 aa7.18□□□□□ -1.26
TRA2B-201ENST00000259043 KLC2Q9H0B6 622 aa7.18□□□□□ -1.26
TRA2B-201ENST00000259043 PPP4R1LQ9P1A2 415 aa7.18□□□□□ -1.26
TRA2B-201ENST00000259043 POLA1P09884 1462 aaPredicted RBP7.17□□□□□ -1.26
TRA2B-201ENST00000259043 ABCC8Q09428 1581 aa7.17□□□□□ -1.26
TRA2B-201ENST00000259043 ESYT3A0FGR9 886 aa7.17□□□□□ -1.26
TRA2B-201ENST00000259043 H0Y858 1186 aa7.17□□□□□ -1.26
TRA2B-201ENST00000259043 SCDO00767 359 aa7.17□□□□□ -1.26
TRA2B-201ENST00000259043 CSF2RBP32927 897 aa7.17□□□□□ -1.26
TRA2B-201ENST00000259043 IL13RA1P78552 427 aa7.17□□□□□ -1.26
TRA2B-201ENST00000259043 KRTAP1-1Q07627 177 aa7.17□□□□□ -1.26
TRA2B-201ENST00000259043 ZCCHC8Q6NZY4 707 aaKnown RBP7.17□□□□□ -1.26
TRA2B-201ENST00000259043 EP400NLQ6ZTU2 488 aa7.17□□□□□ -1.26
TRA2B-201ENST00000259043 AMNQ9BXJ7 453 aa7.17□□□□□ -1.26
TRA2B-201ENST00000259043 VPS11Q9H270 941 aa7.17□□□□□ -1.26
TRA2B-201ENST00000259043 BARX1Q9HBU1 254 aaPredicted RBP7.17□□□□□ -1.26
TRA2B-201ENST00000259043 CD248Q9HCU0 757 aa7.17□□□□□ -1.26
TRA2B-201ENST00000259043 INCENPQ9NQS7 918 aa7.17□□□□□ -1.26
TRA2B-201ENST00000259043 KCNH7Q9NS40 1196 aa7.17□□□□□ -1.26
TRA2B-201ENST00000259043 ARHGAP28Q9P2N2 729 aa7.17□□□□□ -1.26
TRA2B-201ENST00000259043 RAD54L2Q9Y4B4 1467 aa7.17□□□□□ -1.26
TRA2B-201ENST00000259043 SLC12A8A0AV02 714 aa7.16□□□□□ -1.26
TRA2B-201ENST00000259043 NPEPPSL1A6NEC2 478 aa7.16□□□□□ -1.26
TRA2B-201ENST00000259043 GLRX3O76003 335 aaKnown RBP7.16□□□□□ -1.26
TRA2B-201ENST00000259043 MMEP08473 750 aa7.16□□□□□ -1.26
TRA2B-201ENST00000259043 SDSP20132 328 aa7.16□□□□□ -1.26
TRA2B-201ENST00000259043 SDHAP31040 664 aa7.16□□□□□ -1.26
TRA2B-201ENST00000259043 IGFALSP35858 605 aa7.16□□□□□ -1.26
TRA2B-201ENST00000259043 EPHB4P54760 987 aa7.16□□□□□ -1.26
TRA2B-201ENST00000259043 ZNF460Q14592 562 aa7.16□□□□□ -1.26
TRA2B-201ENST00000259043 STILQ15468 1287 aa7.16□□□□□ -1.26
TRA2B-201ENST00000259043 ASB15Q8WXK1 588 aa7.16□□□□□ -1.26
TRA2B-201ENST00000259043 GALNT8Q9NY28 637 aa7.16□□□□□ -1.26
TRA2B-201ENST00000259043 ZDHHC9Q9Y397 364 aa7.16□□□□□ -1.26
TRA2B-201ENST00000259043 TNPO3Q9Y5L0 923 aaKnown RBP7.16□□□□□ -1.26
TRA2B-201ENST00000259043 SNAPC4Q5SXM2 1469 aa7.16□□□□□ -1.26
TRA2B-201ENST00000259043 RFPL3O75679 317 aa7.15□□□□□ -1.26
TRA2B-201ENST00000259043 ASMTLO95671 621 aa7.15□□□□□ -1.26
TRA2B-201ENST00000259043 ASLP04424 464 aa7.15□□□□□ -1.26
TRA2B-201ENST00000259043 PPP2CBP62714 309 aa7.15□□□□□ -1.26
TRA2B-201ENST00000259043 PPP2CAP67775 309 aa7.15□□□□□ -1.26
TRA2B-201ENST00000259043 TOP3AQ13472 1001 aaPredicted RBP7.15□□□□□ -1.26
TRA2B-201ENST00000259043 CATSPEREQ5SY80 951 aa7.15□□□□□ -1.26
TRA2B-201ENST00000259043 REXO1L1PQ8IX06 675 aa7.15□□□□□ -1.26
TRA2B-201ENST00000259043 WNK4Q96J92 1243 aa7.15□□□□□ -1.26
TRA2B-201ENST00000259043 TDRD9Q8NDG6 1382 aaKnown RBP7.15□□□□□ -1.26
TRA2B-201ENST00000259043 SYNJ1O43426 1573 aa7.15□□□□□ -1.27
TRA2B-201ENST00000259043 WDR97A6NE52 1622 aa7.14□□□□□ -1.27
TRA2B-201ENST00000259043 M0R2C6 588 aa7.14□□□□□ -1.27
TRA2B-201ENST00000259043 TRAF5O00463 557 aa7.14□□□□□ -1.27
TRA2B-201ENST00000259043 B4GALT4O60513 344 aa7.14□□□□□ -1.27
TRA2B-201ENST00000259043 APPP05067 770 aa7.14□□□□□ -1.27
TRA2B-201ENST00000259043 POLD1P28340 1107 aa7.14□□□□□ -1.27
TRA2B-201ENST00000259043 LRSAM1Q6UWE0 723 aa7.14□□□□□ -1.27
TRA2B-201ENST00000259043 DPP8Q6V1X1 898 aaPredicted RBP7.14□□□□□ -1.27
TRA2B-201ENST00000259043 C2orf69Q8N8R5 385 aa7.14□□□□□ -1.27
TRA2B-201ENST00000259043 DNERQ8NFT8 737 aa7.14□□□□□ -1.27
TRA2B-201ENST00000259043 PCED1AQ9H1Q7 454 aa7.14□□□□□ -1.27
TRA2B-201ENST00000259043 MEGF9Q9H1U4 602 aa7.14□□□□□ -1.27
TRA2B-201ENST00000259043 SAMD15Q9P1V8 674 aa7.14□□□□□ -1.27
TRA2B-201ENST00000259043 PTPN22Q9Y2R2 807 aa7.14□□□□□ -1.27
TRA2B-201ENST00000259043 GAPVD1Q14C86 1478 aa7.13□□□□□ -1.27
TRA2B-201ENST00000259043 B4E1Z4 1266 aa7.13□□□□□ -1.27
TRA2B-201ENST00000259043 DVL2O14641 736 aa7.13□□□□□ -1.27
TRA2B-201ENST00000259043 FOXP2O15409 715 aa7.13□□□□□ -1.27
TRA2B-201ENST00000259043 GPR42O15529 346 aa7.13□□□□□ -1.27
TRA2B-201ENST00000259043 CNOT4O95628 575 aaKnown RBP7.13□□□□□ -1.27
TRA2B-201ENST00000259043 AMHP03971 560 aa7.13□□□□□ -1.27
TRA2B-201ENST00000259043 ZNF888P0CJ79 500 aaPredicted RBP7.13□□□□□ -1.27
TRA2B-201ENST00000259043 IRF9Q00978 393 aa7.13□□□□□ -1.27
TRA2B-201ENST00000259043 PABPC4Q13310 644 aaKnown RBP eCLIP7.13□□□□□ -1.271e-7■□□□□ 8.5
TRA2B-201ENST00000259043 KANK2Q63ZY3 851 aa7.13□□□□□ -1.27
TRA2B-201ENST00000259043 CXXC5Q7LFL8 322 aaKnown RBP7.13□□□□□ -1.27
TRA2B-201ENST00000259043 GPR155Q7Z3F1 870 aa7.13□□□□□ -1.27
TRA2B-201ENST00000259043 RALYLQ86SE5 291 aaKnown RBP7.13□□□□□ -1.27
TRA2B-201ENST00000259043 DDX53Q86TM3 631 aaKnown RBP7.13□□□□□ -1.27
TRA2B-201ENST00000259043 CIR1Q86X95 450 aaPredicted RBP7.13□□□□□ -1.27
TRA2B-201ENST00000259043 PTPN18Q99952 460 aa7.13□□□□□ -1.27
TRA2B-201ENST00000259043 BOCQ9BWV1 1114 aa7.13□□□□□ -1.27
TRA2B-201ENST00000259043 BTBD2Q9BX70 525 aa7.13□□□□□ -1.27
TRA2B-201ENST00000259043 DEF6Q9H4E7 631 aa7.13□□□□□ -1.27
TRA2B-201ENST00000259043 UCKL1Q9NWZ5 548 aa7.13□□□□□ -1.27
TRA2B-201ENST00000259043 ASB1Q9Y576 335 aa7.13□□□□□ -1.27
TRA2B-201ENST00000259043 SLC4A7Q9Y6M7 1214 aa7.13□□□□□ -1.27
TRA2B-201ENST00000259043 ERCC6L2Q5T890 1561 aa7.12□□□□□ -1.27
TRA2B-201ENST00000259043 FAM83GA6ND36 823 aa7.12□□□□□ -1.27
TRA2B-201ENST00000259043 GOLGA6L22H0YM25 854 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms