RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 HIP1O00291 1037 aa8.36□□□□□ -1.07
GPNMB-201ENST00000258733 SNPHO15079 494 aa8.36□□□□□ -1.07
GPNMB-201ENST00000258733 MAGEB3O15480 346 aa8.36□□□□□ -1.07
GPNMB-201ENST00000258733 ASMTLO95671 621 aa8.36□□□□□ -1.07
GPNMB-201ENST00000258733 FYNP06241 537 aa8.36□□□□□ -1.07
GPNMB-201ENST00000258733 ALADP13716 330 aa8.36□□□□□ -1.07
GPNMB-201ENST00000258733 PLCD1P51178 756 aa8.36□□□□□ -1.07
GPNMB-201ENST00000258733 CHMP4BP1P59074 171 aa8.36□□□□□ -1.07
GPNMB-201ENST00000258733 MYL6P60660 151 aa8.36□□□□□ -1.07
GPNMB-201ENST00000258733 POLR2GP62487 172 aaKnown RBP eCLIP8.36□□□□□ -1.07
GPNMB-201ENST00000258733 TUBB4BP68371 445 aa8.36□□□□□ -1.07
GPNMB-201ENST00000258733 SKOR1P84550 965 aa8.36□□□□□ -1.07
GPNMB-201ENST00000258733 LMNB2Q03252 620 aa8.36□□□□□ -1.07
GPNMB-201ENST00000258733 SEPT6Q14141 434 aa8.36□□□□□ -1.07
GPNMB-201ENST00000258733 WDR43Q15061 677 aaKnown RBP eCLIP8.36□□□□□ -1.07
GPNMB-201ENST00000258733 STILQ15468 1287 aa8.36□□□□□ -1.07
GPNMB-201ENST00000258733 LACTB2Q53H82 288 aaPredicted RBP8.36□□□□□ -1.07
GPNMB-201ENST00000258733 EAPPQ56P03 285 aaPredicted RBP8.36□□□□□ -1.07
GPNMB-201ENST00000258733 CMPK2Q5EBM0 449 aa8.36□□□□□ -1.07
GPNMB-201ENST00000258733 HABP4Q5JVS0 413 aaKnown RBP8.36□□□□□ -1.07
GPNMB-201ENST00000258733 TTC23LQ6PF05 361 aa8.36□□□□□ -1.07
GPNMB-201ENST00000258733 RUFY4Q6ZNE9 571 aa8.36□□□□□ -1.07
GPNMB-201ENST00000258733 BBOF1Q8ND07 529 aa8.36□□□□□ -1.07
GPNMB-201ENST00000258733 TMC2Q8TDI7 906 aa8.36□□□□□ -1.07
GPNMB-201ENST00000258733 L3MBTL2Q969R5 705 aa8.36□□□□□ -1.07
GPNMB-201ENST00000258733 PGBD4Q96DM1 585 aa8.36□□□□□ -1.07
GPNMB-201ENST00000258733 ITPKCQ96DU7 683 aa8.36□□□□□ -1.07
GPNMB-201ENST00000258733 GBP5Q96PP8 586 aa8.36□□□□□ -1.07
GPNMB-201ENST00000258733 EPN3Q9H201 632 aa8.36□□□□□ -1.07
GPNMB-201ENST00000258733 TMEM206Q9H813 350 aa8.36□□□□□ -1.07
GPNMB-201ENST00000258733 FANCEQ9HB96 536 aa8.36□□□□□ -1.07
GPNMB-201ENST00000258733 PCDH12Q9NPG4 1184 aa8.36□□□□□ -1.07
GPNMB-201ENST00000258733 SCOCQ9UIL1 159 aa8.36□□□□□ -1.07
GPNMB-201ENST00000258733 USTQ9Y2C2 406 aa8.36□□□□□ -1.07
GPNMB-201ENST00000258733 A8MX80 341 aa8.35□□□□□ -1.07
GPNMB-201ENST00000258733 SERPINC1P01008 464 aa8.35□□□□□ -1.07
GPNMB-201ENST00000258733 ENO2P09104 434 aaPredicted RBP8.35□□□□□ -1.07
GPNMB-201ENST00000258733 SFTPCP11686 197 aa8.35□□□□□ -1.07
GPNMB-201ENST00000258733 ATP2A2P16615 1042 aaKnown RBP8.35□□□□□ -1.07
GPNMB-201ENST00000258733 KRT20P35900 424 aa8.35□□□□□ -1.07
GPNMB-201ENST00000258733 GNL1P36915 607 aaPredicted RBP8.35□□□□□ -1.07
GPNMB-201ENST00000258733 HSD17B4P51659 736 aa8.35□□□□□ -1.07
GPNMB-201ENST00000258733 FAPQ12884 760 aa8.35□□□□□ -1.07
GPNMB-201ENST00000258733 STK38Q15208 465 aa8.35□□□□□ -1.07
GPNMB-201ENST00000258733 SPRED3Q2MJR0 410 aa8.35□□□□□ -1.07
GPNMB-201ENST00000258733 DHX32Q7L7V1 743 aaKnown RBP8.35□□□□□ -1.07
GPNMB-201ENST00000258733 TAS1R3Q7RTX0 852 aa8.35□□□□□ -1.07
GPNMB-201ENST00000258733 CCDC84Q86UT8 332 aaPredicted RBP8.35□□□□□ -1.07
GPNMB-201ENST00000258733 ARRDC4Q8NCT1 418 aa8.35□□□□□ -1.07
GPNMB-201ENST00000258733 EXD1Q8NHP7 514 aa8.35□□□□□ -1.07
GPNMB-201ENST00000258733 MGARPQ8TDB4 240 aa8.35□□□□□ -1.07
GPNMB-201ENST00000258733 HAUS8Q9BT25 410 aa8.35□□□□□ -1.07
GPNMB-201ENST00000258733 OSBPL3Q9H4L5 887 aa8.35□□□□□ -1.07
GPNMB-201ENST00000258733 ATP8A2Q9NTI2 1148 aa8.35□□□□□ -1.07
GPNMB-201ENST00000258733 TRIM10Q9UDY6 481 aa8.35□□□□□ -1.07
GPNMB-201ENST00000258733 LAMP5Q9UJQ1 280 aa8.35□□□□□ -1.07
GPNMB-201ENST00000258733 VANGL2Q9ULK5 521 aa8.35□□□□□ -1.07
GPNMB-201ENST00000258733 HPCAL4Q9UM19 191 aa8.35□□□□□ -1.07
GPNMB-201ENST00000258733 PLAAQ9Y263 795 aa8.35□□□□□ -1.07
GPNMB-201ENST00000258733 DNAJC16Q9Y2G8 782 aa8.35□□□□□ -1.07
GPNMB-201ENST00000258733 TDRKHQ9Y2W6 561 aaKnown RBP8.35□□□□□ -1.07
GPNMB-201ENST00000258733 PCDHB15Q9Y5E8 787 aa8.35□□□□□ -1.07
GPNMB-201ENST00000258733 BLMP54132 1417 aaPredicted RBP8.35□□□□□ -1.07
GPNMB-201ENST00000258733 ZCCHC11Q5TAX3 1644 aaKnown RBP8.35□□□□□ -1.07
GPNMB-201ENST00000258733 CRYZL1O95825 349 aa8.35□□□□□ -1.07
GPNMB-201ENST00000258733 ZBED1O96006 694 aa8.35□□□□□ -1.07
GPNMB-201ENST00000258733 IFNA8P32881 189 aa8.35□□□□□ -1.07
GPNMB-201ENST00000258733 RXRGP48443 463 aa8.35□□□□□ -1.07
GPNMB-201ENST00000258733 ARHGDIBP52566 201 aa8.35□□□□□ -1.07
GPNMB-201ENST00000258733 MAP3K7CLP57077 242 aa8.35□□□□□ -1.07
GPNMB-201ENST00000258733 RELAQ04206 551 aa8.35□□□□□ -1.07
GPNMB-201ENST00000258733 TAF12Q16514 161 aa8.35□□□□□ -1.07
GPNMB-201ENST00000258733 PTGISQ16647 500 aa8.35□□□□□ -1.07
GPNMB-201ENST00000258733 CAVIN4Q5BKX8 364 aa8.35□□□□□ -1.07
GPNMB-201ENST00000258733 FAM26DQ5JW98 314 aa8.35□□□□□ -1.07
GPNMB-201ENST00000258733 PPP1R21Q6ZMI0 780 aa8.35□□□□□ -1.07
GPNMB-201ENST00000258733 PNMA8AQ86V59 439 aaPredicted RBP8.35□□□□□ -1.07
GPNMB-201ENST00000258733 ANKMY2Q8IV38 441 aa8.35□□□□□ -1.07
GPNMB-201ENST00000258733 REM2Q8IYK8 340 aaPredicted RBP8.35□□□□□ -1.07
GPNMB-201ENST00000258733 ATL1Q8WXF7 558 aa8.35□□□□□ -1.07
GPNMB-201ENST00000258733 SPOCK2Q92563 424 aa8.35□□□□□ -1.07
GPNMB-201ENST00000258733 COG8Q96MW5 612 aa8.35□□□□□ -1.07
GPNMB-201ENST00000258733 TESK2Q96S53 571 aa8.35□□□□□ -1.07
GPNMB-201ENST00000258733 NDST4Q9H3R1 872 aa8.35□□□□□ -1.07
GPNMB-201ENST00000258733 VTA1Q9NP79 307 aa8.35□□□□□ -1.07
GPNMB-201ENST00000258733 NDUFA13Q9P0J0 144 aa8.35□□□□□ -1.07
GPNMB-201ENST00000258733 SCAF8Q9UPN6 1271 aaKnown RBP8.35□□□□□ -1.07
GPNMB-201ENST00000258733 MYO5CQ9NQX4 1742 aa8.34□□□□□ -1.07
GPNMB-201ENST00000258733 GLRX3O76003 335 aaKnown RBP8.34□□□□□ -1.07
GPNMB-201ENST00000258733 BAG3O95817 575 aa8.34□□□□□ -1.07
GPNMB-201ENST00000258733 ABCB1P08183 1280 aaPredicted RBP8.34□□□□□ -1.07
GPNMB-201ENST00000258733 ZNF3P17036 446 aa8.34□□□□□ -1.07
GPNMB-201ENST00000258733 GGCXP38435 758 aa8.34□□□□□ -1.07
GPNMB-201ENST00000258733 VSNL1P62760 191 aa8.34□□□□□ -1.07
GPNMB-201ENST00000258733 TYRO3Q06418 890 aa8.34□□□□□ -1.07
GPNMB-201ENST00000258733 EZH2Q15910 746 aaKnown RBP8.34□□□□□ -1.07
GPNMB-201ENST00000258733 LETM2Q2VYF4 491 aa8.34□□□□□ -1.07
GPNMB-201ENST00000258733 DBX2Q6ZNG2 339 aa8.34□□□□□ -1.07
GPNMB-201ENST00000258733 LONP2Q86WA8 852 aa8.34□□□□□ -1.07
GPNMB-201ENST00000258733 SLC44A2Q8IWA5 706 aaPredicted RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms