RNA–Protein interactions for RNA: ENST00000255622.10

PDE6B-201, Transcript of phosphodiesterase 6B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDE6B, Length 3,280 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-201ENST00000255622 GGCXP38435 758 aa12.35□□□□□ -0.43
PDE6B-201ENST00000255622 POLR2FP61218 127 aaKnown RBP12.35□□□□□ -0.43
PDE6B-201ENST00000255622 ASTE1Q2TB18 679 aaPredicted RBP12.35□□□□□ -0.43
PDE6B-201ENST00000255622 LRRC23Q53EV4 343 aaPredicted RBP12.35□□□□□ -0.43
PDE6B-201ENST00000255622 POTEGQ6S5H5 508 aa12.35□□□□□ -0.43
PDE6B-201ENST00000255622 POTEEQ6S8J3 1075 aa12.35□□□□□ -0.43
PDE6B-201ENST00000255622 CCNI2Q6ZMN8 369 aaPredicted RBP12.35□□□□□ -0.43
PDE6B-201ENST00000255622 RBM12BQ8IXT5 1001 aaKnown RBP12.35□□□□□ -0.43
PDE6B-201ENST00000255622 LMBR1Q8WVP7 490 aa12.35□□□□□ -0.43
PDE6B-201ENST00000255622 SCLT1Q96NL6 688 aa12.35□□□□□ -0.43
PDE6B-201ENST00000255622 LSM14BQ9BX40 385 aaKnown RBP12.35□□□□□ -0.43
PDE6B-201ENST00000255622 NACA2Q9H009 215 aa12.35□□□□□ -0.43
PDE6B-201ENST00000255622 UNC45AQ9H3U1 944 aa12.35□□□□□ -0.43
PDE6B-201ENST00000255622 MEIS1O00470 390 aa12.35□□□□□ -0.43
PDE6B-201ENST00000255622 EBAG9O00559 213 aa12.35□□□□□ -0.43
PDE6B-201ENST00000255622 MED24O75448 989 aa12.35□□□□□ -0.43
PDE6B-201ENST00000255622 FGFR1OPO95684 399 aaKnown RBP12.35□□□□□ -0.43
PDE6B-201ENST00000255622 TUBBP07437 444 aa12.35□□□□□ -0.43
PDE6B-201ENST00000255622 PLA2G4BP0C869 781 aa12.35□□□□□ -0.43
PDE6B-201ENST00000255622 EZRP15311 586 aaKnown RBP12.35□□□□□ -0.43
PDE6B-201ENST00000255622 CASP5P51878 434 aa12.35□□□□□ -0.43
PDE6B-201ENST00000255622 MRPL12P52815 198 aaKnown RBP12.35□□□□□ -0.43
PDE6B-201ENST00000255622 FKBP3Q00688 224 aaKnown RBP12.35□□□□□ -0.43
PDE6B-201ENST00000255622 QRICH1Q2TAL8 776 aa12.35□□□□□ -0.43
PDE6B-201ENST00000255622 HERC4Q5GLZ8 1057 aaPredicted RBP12.35□□□□□ -0.43
PDE6B-201ENST00000255622 GPBP1Q86WP2 473 aa12.35□□□□□ -0.43
PDE6B-201ENST00000255622 SPATA4Q8NEY3 305 aa12.35□□□□□ -0.43
PDE6B-201ENST00000255622 PCDHA2Q9Y5H9 948 aa12.35□□□□□ -0.43
PDE6B-201ENST00000255622 DYTNA2CJ06 578 aa12.34□□□□□ -0.43
PDE6B-201ENST00000255622 UBAP1LF5GYI3 381 aa12.34□□□□□ -0.43
PDE6B-201ENST00000255622 ZNF24P17028 368 aa12.34□□□□□ -0.43
PDE6B-201ENST00000255622 ADRA2BP18089 450 aa12.34□□□□□ -0.43
PDE6B-201ENST00000255622 GJA8P48165 433 aa12.34□□□□□ -0.43
PDE6B-201ENST00000255622 CEP85LQ5SZL2 805 aa12.34□□□□□ -0.43
PDE6B-201ENST00000255622 FAM83BQ5T0W9 1011 aa12.34□□□□□ -0.43
PDE6B-201ENST00000255622 APOBEC3HQ6NTF7 200 aaKnown RBP12.34□□□□□ -0.43
PDE6B-201ENST00000255622 DNAAF5Q86Y56 855 aa12.34□□□□□ -0.43
PDE6B-201ENST00000255622 SYCP3Q8IZU3 236 aa12.34□□□□□ -0.43
PDE6B-201ENST00000255622 SCFD1Q8WVM8 642 aa12.34□□□□□ -0.43
PDE6B-201ENST00000255622 RPGRIP1Q96KN7 1286 aa12.34□□□□□ -0.43
PDE6B-201ENST00000255622 BCAS3Q9H6U6 928 aa12.34□□□□□ -0.43
PDE6B-201ENST00000255622 ATF5Q9Y2D1 282 aaPredicted RBP12.34□□□□□ -0.43
PDE6B-201ENST00000255622 PCDHA1Q9Y5I3 950 aa12.34□□□□□ -0.43
PDE6B-201ENST00000255622 PSMC6P62333 389 aa12.34□□□□□ -0.43
PDE6B-201ENST00000255622 TAF4BQ92750 862 aa12.34□□□□□ -0.43
PDE6B-201ENST00000255622 ZC3H12CQ9C0D7 883 aaKnown RBP12.34□□□□□ -0.43
PDE6B-201ENST00000255622 A1CFQ9NQ94 594 aaKnown RBP12.34□□□□□ -0.43
PDE6B-201ENST00000255622 AGPSO00116 658 aa12.33□□□□□ -0.44
PDE6B-201ENST00000255622 KCTD19Q17RG1 926 aaPredicted RBP12.33□□□□□ -0.44
PDE6B-201ENST00000255622 ARSHQ5FYA8 562 aa12.33□□□□□ -0.44
PDE6B-201ENST00000255622 SFMBT2Q5VUG0 894 aa12.33□□□□□ -0.44
PDE6B-201ENST00000255622 PPP1R18Q6NYC8 613 aa12.33□□□□□ -0.44
PDE6B-201ENST00000255622 GJD4Q96KN9 370 aaPredicted RBP12.33□□□□□ -0.44
PDE6B-201ENST00000255622 TLR10Q9BXR5 811 aa12.33□□□□□ -0.44
PDE6B-201ENST00000255622 PACSIN1Q9BY11 444 aa12.33□□□□□ -0.44
PDE6B-201ENST00000255622 COA1Q9GZY4 146 aa12.33□□□□□ -0.44
PDE6B-201ENST00000255622 PACSIN2Q9UNF0 486 aaPredicted RBP12.33□□□□□ -0.44
PDE6B-201ENST00000255622 ABCB11O95342 1321 aa12.33□□□□□ -0.44
PDE6B-201ENST00000255622 PRPF6O94906 941 aaKnown RBP12.33□□□□□ -0.44
PDE6B-201ENST00000255622 EEF2P13639 858 aaKnown RBP12.33□□□□□ -0.44
PDE6B-201ENST00000255622 CYP11B2P19099 503 aa12.33□□□□□ -0.44
PDE6B-201ENST00000255622 GNPTABQ3T906 1256 aa12.33□□□□□ -0.44
PDE6B-201ENST00000255622 KLHDC7AQ5VTJ3 777 aa12.33□□□□□ -0.44
PDE6B-201ENST00000255622 CXorf38Q8TB03 319 aa12.33□□□□□ -0.44
PDE6B-201ENST00000255622 ALS2CR12Q96Q35 445 aa12.33□□□□□ -0.44
PDE6B-201ENST00000255622 CRAMP1Q96RY5 1269 aa12.33□□□□□ -0.44
PDE6B-201ENST00000255622 DBNDD1Q9H9R9 158 aa12.33□□□□□ -0.44
PDE6B-201ENST00000255622 FTCDO95954 541 aa12.33□□□□□ -0.44
PDE6B-201ENST00000255622 ACTN1P12814 892 aa12.33□□□□□ -0.44
PDE6B-201ENST00000255622 AARSP49588 968 aaKnown RBP eCLIP12.33□□□□□ -0.44
PDE6B-201ENST00000255622 RAPGEF1Q13905 1077 aa12.33□□□□□ -0.44
PDE6B-201ENST00000255622 CDC37Q16543 378 aaPredicted RBP12.33□□□□□ -0.44
PDE6B-201ENST00000255622 USH1GQ495M9 461 aa12.33□□□□□ -0.44
PDE6B-201ENST00000255622 GPATCH4Q5T3I0 446 aaKnown RBP12.33□□□□□ -0.44
PDE6B-201ENST00000255622 PARP9Q8IXQ6 854 aa12.33□□□□□ -0.44
PDE6B-201ENST00000255622 FAM133AQ8N9E0 248 aa12.33□□□□□ -0.44
PDE6B-201ENST00000255622 FAM81AQ8TBF8 368 aa12.33□□□□□ -0.44
PDE6B-201ENST00000255622 ANO3Q9BYT9 981 aa12.33□□□□□ -0.44
PDE6B-201ENST00000255622 VIPAS39Q9H9C1 493 aa12.33□□□□□ -0.44
PDE6B-201ENST00000255622 RBM12Q9NTZ6 932 aaKnown RBP12.33□□□□□ -0.44
PDE6B-201ENST00000255622 RGL1Q9NZL6 768 aa12.33□□□□□ -0.44
PDE6B-201ENST00000255622 SWAP70Q9UH65 585 aa12.33□□□□□ -0.44
PDE6B-201ENST00000255622 DDTLA6NHG4 134 aaPredicted RBP12.32□□□□□ -0.44
PDE6B-201ENST00000255622 KRT18P05783 430 aaKnown RBP12.32□□□□□ -0.44
PDE6B-201ENST00000255622 CDC25CP30307 473 aa12.32□□□□□ -0.44
PDE6B-201ENST00000255622 ABL2P42684 1182 aa12.32□□□□□ -0.44
PDE6B-201ENST00000255622 PRR16Q569H4 304 aa12.32□□□□□ -0.44
PDE6B-201ENST00000255622 SLC30A10Q6XR72 485 aa12.32□□□□□ -0.44
PDE6B-201ENST00000255622 SND1Q7KZF4 910 aaKnown RBP eCLIP12.32□□□□□ -0.44
PDE6B-201ENST00000255622 SP8Q8IXZ3 490 aa12.32□□□□□ -0.44
PDE6B-201ENST00000255622 SEPT12Q8IYM1 358 aa12.32□□□□□ -0.44
PDE6B-201ENST00000255622 PROM2Q8N271 834 aa12.32□□□□□ -0.44
PDE6B-201ENST00000255622 IQCDQ96DY2 449 aa12.32□□□□□ -0.44
PDE6B-201ENST00000255622 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.32□□□□□ -0.44
PDE6B-201ENST00000255622 LRRC27Q9C0I9 530 aa12.32□□□□□ -0.44
PDE6B-201ENST00000255622 KCTD10Q9H3F6 313 aa12.32□□□□□ -0.44
PDE6B-201ENST00000255622 SPATA7Q9P0W8 599 aa12.32□□□□□ -0.44
PDE6B-201ENST00000255622 ITM2BQ9Y287 266 aa12.32□□□□□ -0.44
PDE6B-201ENST00000255622 ATP6V0A2Q9Y487 856 aa12.32□□□□□ -0.44
PDE6B-201ENST00000255622 HYOU1Q9Y4L1 999 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms