RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 POTEFA5A3E0 1075 aa20.11■□□□□ 0.81
SMARCC1-201ENST00000254480 hCG_1984214I3L0E3 225 aa20.11■□□□□ 0.81
SMARCC1-201ENST00000254480 ZBTB5O15062 677 aa20.11■□□□□ 0.81
SMARCC1-201ENST00000254480 POTEIP0CG38 1075 aa20.11■□□□□ 0.81
SMARCC1-201ENST00000254480 SOX5P35711 763 aa20.11■□□□□ 0.81
SMARCC1-201ENST00000254480 POTEGQ6S5H5 508 aa20.11■□□□□ 0.81
SMARCC1-201ENST00000254480 POTEEQ6S8J3 1075 aa20.11■□□□□ 0.81
SMARCC1-201ENST00000254480 ZNF713Q8N859 430 aaPredicted RBP20.11■□□□□ 0.81
SMARCC1-201ENST00000254480 RUNDC3BQ96NL0 473 aa20.11■□□□□ 0.81
SMARCC1-201ENST00000254480 PI4K2BG5E9Z4 385 aa20.11■□□□□ 0.81
SMARCC1-201ENST00000254480 CYFIP1Q7L576 1253 aa20.11■□□□□ 0.81
SMARCC1-201ENST00000254480 SCN4BQ8IWT1 228 aa20.11■□□□□ 0.81
SMARCC1-201ENST00000254480 SCAF8Q9UPN6 1271 aaKnown RBP20.11■□□□□ 0.81
SMARCC1-201ENST00000254480 SPP2Q13103 211 aa20.11■□□□□ 0.81
SMARCC1-201ENST00000254480 NNTQ13423 1086 aa20.11■□□□□ 0.81
SMARCC1-201ENST00000254480 ARHGEF1Q92888 912 aaKnown RBP20.11■□□□□ 0.81
SMARCC1-201ENST00000254480 SPECC1L-ADORA2AF8WAN1 911 aa20.11■□□□□ 0.81
SMARCC1-201ENST00000254480 PDCD6IPQ8WUM4 868 aaKnown RBP20.11■□□□□ 0.81
SMARCC1-201ENST00000254480 GFPT1Q06210 699 aaPredicted RBP20.1■□□□□ 0.81
SMARCC1-201ENST00000254480 MAP3K21Q5TCX8 1036 aa20.1■□□□□ 0.81
SMARCC1-201ENST00000254480 ZNF746Q6NUN9 644 aaPredicted RBP20.1■□□□□ 0.81
SMARCC1-201ENST00000254480 TPX2Q9ULW0 747 aaKnown RBP20.1■□□□□ 0.81
SMARCC1-201ENST00000254480 RESP18Q5W5W9 173 aa20.1■□□□□ 0.81
SMARCC1-201ENST00000254480 RHPN2Q8IUC4 686 aa20.1■□□□□ 0.81
SMARCC1-201ENST00000254480 GSPT2Q8IYD1 628 aaKnown RBP20.1■□□□□ 0.81
SMARCC1-201ENST00000254480 HEY1Q9Y5J3 304 aa20.1■□□□□ 0.81
SMARCC1-201ENST00000254480 PALMO75781 387 aa20.1■□□□□ 0.81
SMARCC1-201ENST00000254480 ELF1P32519 619 aa20.1■□□□□ 0.81
SMARCC1-201ENST00000254480 ANAPC7Q9UJX3 599 aa20.1■□□□□ 0.81
SMARCC1-201ENST00000254480 SH2D3AQ9BRG2 576 aa20.1■□□□□ 0.81
SMARCC1-201ENST00000254480 GNGT2O14610 69 aa20.1■□□□□ 0.81
SMARCC1-201ENST00000254480 CLDN3O15551 220 aa20.1■□□□□ 0.81
SMARCC1-201ENST00000254480 STX1BP61266 288 aa20.1■□□□□ 0.81
SMARCC1-201ENST00000254480 GPSM2P81274 684 aa20.1■□□□□ 0.81
SMARCC1-201ENST00000254480 HDLBPQ00341 1268 aaKnown RBP20.1■□□□□ 0.81
SMARCC1-201ENST00000254480 MAML1Q92585 1016 aa20.1■□□□□ 0.81
SMARCC1-201ENST00000254480 ZBED2Q9BTP6 218 aa20.1■□□□□ 0.81
SMARCC1-201ENST00000254480 SYNMO15061 1565 aa20.09■□□□□ 0.81
SMARCC1-201ENST00000254480 ZNF449Q6P9G9 518 aa20.09■□□□□ 0.81
SMARCC1-201ENST00000254480 BRIP1Q9BX63 1249 aa20.09■□□□□ 0.81
SMARCC1-201ENST00000254480 MOSPD1Q9UJG1 213 aa20.09■□□□□ 0.81
SMARCC1-201ENST00000254480 PRCPP42785 496 aa20.09■□□□□ 0.81
SMARCC1-201ENST00000254480 PSMD2Q13200 908 aa20.09■□□□□ 0.81
SMARCC1-201ENST00000254480 SWSAP1Q6NVH7 229 aa20.09■□□□□ 0.81
SMARCC1-201ENST00000254480 PADI6Q6TGC4 694 aa20.09■□□□□ 0.81
SMARCC1-201ENST00000254480 TMEM270Q6UE05 265 aa20.09■□□□□ 0.81
SMARCC1-201ENST00000254480 SDCCAG3Q96C92 435 aa20.09■□□□□ 0.81
SMARCC1-201ENST00000254480 SAAL1Q96ER3 474 aa20.09■□□□□ 0.81
SMARCC1-201ENST00000254480 OTUD5Q96G74 571 aa20.09■□□□□ 0.81
SMARCC1-201ENST00000254480 TWF2Q6IBS0 349 aaKnown RBP20.09■□□□□ 0.81
SMARCC1-201ENST00000254480 VCX3AQ9NNX9 186 aa20.09■□□□□ 0.81
SMARCC1-201ENST00000254480 DCP1AQ9NPI6 582 aaPredicted RBP20.09■□□□□ 0.81
SMARCC1-201ENST00000254480 TTC7AQ9ULT0 858 aaPredicted RBP20.09■□□□□ 0.81
SMARCC1-201ENST00000254480 GOLGA8CPA6NN73 597 aa20.09■□□□□ 0.81
SMARCC1-201ENST00000254480 JRKLQ9Y4A0 524 aa20.09■□□□□ 0.81
SMARCC1-201ENST00000254480 PMLP29590 882 aa20.09■□□□□ 0.81
SMARCC1-201ENST00000254480 TEX2Q8IWB9 1127 aa20.09■□□□□ 0.81
SMARCC1-201ENST00000254480 FAF2Q96CS3 445 aa20.09■□□□□ 0.81
SMARCC1-201ENST00000254480 ZNF667Q5HYK9 610 aa20.08■□□□□ 0.81
SMARCC1-201ENST00000254480 COL15A1P39059 1388 aa20.08■□□□□ 0.81
SMARCC1-201ENST00000254480 ZNF521Q96K83 1311 aa20.08■□□□□ 0.81
SMARCC1-201ENST00000254480 ZNF211Q13398 564 aaPredicted RBP20.08■□□□□ 0.81
SMARCC1-201ENST00000254480 ZNF568Q3ZCX4 644 aa20.08■□□□□ 0.81
SMARCC1-201ENST00000254480 USH1CQ9Y6N9 552 aa20.08■□□□□ 0.81
SMARCC1-201ENST00000254480 PEX19P40855 299 aa20.08■□□□□ 0.81
SMARCC1-201ENST00000254480 PFKFB3Q16875 520 aaPredicted RBP20.08■□□□□ 0.81
SMARCC1-201ENST00000254480 DGKHQ86XP1 1220 aa20.08■□□□□ 0.81
SMARCC1-201ENST00000254480 SEC23IPQ9Y6Y8 1000 aaKnown RBP20.08■□□□□ 0.81
SMARCC1-201ENST00000254480 CPDO75976 1380 aa20.08■□□□□ 0.8
SMARCC1-201ENST00000254480 STXBP2Q15833 593 aa20.08■□□□□ 0.8
SMARCC1-201ENST00000254480 PYROXD1Q8WU10 500 aa20.08■□□□□ 0.8
SMARCC1-201ENST00000254480 ABCB6Q9NP58 842 aa20.08■□□□□ 0.8
SMARCC1-201ENST00000254480 PRELPP51888 382 aa20.08■□□□□ 0.8
SMARCC1-201ENST00000254480 TXNRD1Q16881 649 aa20.08■□□□□ 0.8
SMARCC1-201ENST00000254480 NUDCD1Q96RS6 583 aa20.08■□□□□ 0.8
SMARCC1-201ENST00000254480 LMCD1Q9NZU5 365 aa20.08■□□□□ 0.8
SMARCC1-201ENST00000254480 AFF2P51816 1311 aa20.07■□□□□ 0.8
SMARCC1-201ENST00000254480 MFAP3LO75121 409 aa20.07■□□□□ 0.8
SMARCC1-201ENST00000254480 TTC4O95801 387 aa20.07■□□□□ 0.8
SMARCC1-201ENST00000254480 NSUN2Q08J23 767 aaKnown RBP eCLIP20.07■□□□□ 0.8
SMARCC1-201ENST00000254480 ARMCX2Q7L311 632 aa20.07■□□□□ 0.8
SMARCC1-201ENST00000254480 FMO2Q99518 471 aa20.07■□□□□ 0.8
SMARCC1-201ENST00000254480 PCSK1NQ9UHG2 260 aa20.07■□□□□ 0.8
SMARCC1-201ENST00000254480 SNX24Q9Y343 169 aa20.07■□□□□ 0.8
SMARCC1-201ENST00000254480 KDM5CP41229 1560 aa20.07■□□□□ 0.8
SMARCC1-201ENST00000254480 SCARF1Q14162 830 aa20.07■□□□□ 0.8
SMARCC1-201ENST00000254480 RC3H1Q5TC82 1133 aaKnown RBP20.07■□□□□ 0.8
SMARCC1-201ENST00000254480 ZNF710Q8N1W2 664 aa20.07■□□□□ 0.8
SMARCC1-201ENST00000254480 ATP6V0A4Q9HBG4 840 aa20.07■□□□□ 0.8
SMARCC1-201ENST00000254480 LY9Q9HBG7 655 aa20.07■□□□□ 0.8
SMARCC1-201ENST00000254480 PRDM5Q9NQX1 630 aaPredicted RBP20.07■□□□□ 0.8
SMARCC1-201ENST00000254480 PHLPP2Q6ZVD8 1323 aa20.07■□□□□ 0.8
SMARCC1-201ENST00000254480 LRRC63Q05C16 580 aa20.07■□□□□ 0.8
SMARCC1-201ENST00000254480 PBKQ96KB5 322 aa20.07■□□□□ 0.8
SMARCC1-201ENST00000254480 ADAM22Q9P0K1 906 aa20.07■□□□□ 0.8
SMARCC1-201ENST00000254480 LRRC53A6NM62 1247 aa20.07■□□□□ 0.8
SMARCC1-201ENST00000254480 RASGRF2O14827 1237 aa20.07■□□□□ 0.8
SMARCC1-201ENST00000254480 NCK2O43639 380 aa20.07■□□□□ 0.8
SMARCC1-201ENST00000254480 CREB3O43889 395 aa20.07■□□□□ 0.8
SMARCC1-201ENST00000254480 NR3C1P04150 777 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms