RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 CCDC197Q8NCU1 140 aa4.52□□□□□ -1.69
UBE4A-201ENST00000252108 RAD54LQ92698 747 aa4.52□□□□□ -1.69
UBE4A-201ENST00000252108 ATP6V1G3Q96LB4 118 aa4.52□□□□□ -1.69
UBE4A-201ENST00000252108 TXLNGYQ9BZA5 131 aa4.52□□□□□ -1.69
UBE4A-201ENST00000252108 CPVLQ9H3G5 476 aa4.52□□□□□ -1.69
UBE4A-201ENST00000252108 CEP72Q9P209 647 aa4.52□□□□□ -1.69
UBE4A-201ENST00000252108 NYAP2Q9P242 653 aa4.52□□□□□ -1.69
UBE4A-201ENST00000252108 TRIM10Q9UDY6 481 aa4.52□□□□□ -1.69
UBE4A-201ENST00000252108 AJAP1Q9UKB5 411 aaPredicted RBP4.52□□□□□ -1.69
UBE4A-201ENST00000252108 RTCBQ9Y3I0 505 aaKnown RBP4.52□□□□□ -1.69
UBE4A-201ENST00000252108 PCDHGC5Q9Y5F6 944 aa4.52□□□□□ -1.69
UBE4A-201ENST00000252108 PCDHA3Q9Y5H8 950 aa4.52□□□□□ -1.69
UBE4A-201ENST00000252108 PCDHAC2Q9Y5I4 1007 aa4.52□□□□□ -1.69
UBE4A-201ENST00000252108 KLRF2D3W0D1 207 aa4.52□□□□□ -1.69
UBE4A-201ENST00000252108 TP73O15350 636 aa4.52□□□□□ -1.69
UBE4A-201ENST00000252108 LDHBP07195 334 aaKnown RBP4.52□□□□□ -1.69
UBE4A-201ENST00000252108 RASSF2P50749 326 aa4.52□□□□□ -1.69
UBE4A-201ENST00000252108 KIF11P52732 1056 aa4.52□□□□□ -1.69
UBE4A-201ENST00000252108 KLHL30Q0D2K2 578 aa4.52□□□□□ -1.69
UBE4A-201ENST00000252108 NFIAQ12857 509 aa4.52□□□□□ -1.69
UBE4A-201ENST00000252108 ASPRV1Q53RT3 343 aa4.52□□□□□ -1.69
UBE4A-201ENST00000252108 NBPF5PQ86XG9 351 aaPredicted RBP4.52□□□□□ -1.69
UBE4A-201ENST00000252108 LMNTD2Q8IXW0 634 aa4.52□□□□□ -1.69
UBE4A-201ENST00000252108 MYOCDQ8IZQ8 938 aa4.52□□□□□ -1.69
UBE4A-201ENST00000252108 UBL4BQ8N7F7 174 aa4.52□□□□□ -1.69
UBE4A-201ENST00000252108 TMEM260Q9NX78 707 aa4.52□□□□□ -1.69
UBE4A-201ENST00000252108 STK32BQ9NY57 414 aa4.52□□□□□ -1.69
UBE4A-201ENST00000252108 BCCIPQ9P287 314 aaKnown RBP eCLIP4.52□□□□□ -1.69
UBE4A-201ENST00000252108 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.52□□□□□ -1.69
UBE4A-201ENST00000252108 YDJCA8MPS7 323 aa4.52□□□□□ -1.69
UBE4A-201ENST00000252108 KIF3CO14782 793 aa4.52□□□□□ -1.69
UBE4A-201ENST00000252108 HEXIM1O94992 359 aaKnown RBP4.52□□□□□ -1.69
UBE4A-201ENST00000252108 SERPINB2P05120 415 aa4.52□□□□□ -1.69
UBE4A-201ENST00000252108 TSPY3P0CV98 308 aa4.52□□□□□ -1.69
UBE4A-201ENST00000252108 TSPY8P0CW00 308 aa4.52□□□□□ -1.69
UBE4A-201ENST00000252108 ALDH3A1P30838 453 aa4.52□□□□□ -1.69
UBE4A-201ENST00000252108 CTNNA1P35221 906 aaKnown RBP4.52□□□□□ -1.69
UBE4A-201ENST00000252108 FKBP3Q00688 224 aaKnown RBP4.52□□□□□ -1.69
UBE4A-201ENST00000252108 NCAPH2Q6IBW4 605 aa4.52□□□□□ -1.69
UBE4A-201ENST00000252108 USP37Q86T82 979 aa4.52□□□□□ -1.69
UBE4A-201ENST00000252108 MREGQ8N565 214 aa4.52□□□□□ -1.69
UBE4A-201ENST00000252108 PIGSQ96S52 555 aa4.52□□□□□ -1.69
UBE4A-201ENST00000252108 OSBPL9Q96SU4 736 aa4.52□□□□□ -1.69
UBE4A-201ENST00000252108 MCM9Q9NXL9 1143 aa4.52□□□□□ -1.69
UBE4A-201ENST00000252108 AIPL1Q9NZN9 384 aa4.52□□□□□ -1.69
UBE4A-201ENST00000252108 PITPNM2Q9BZ72 1349 aa4.52□□□□□ -1.69
UBE4A-201ENST00000252108 RALGAPA2Q2PPJ7 1873 aa4.52□□□□□ -1.69
UBE4A-201ENST00000252108 PGRMC1O00264 195 aaKnown RBP4.52□□□□□ -1.69
UBE4A-201ENST00000252108 FSBPO95073 299 aa4.52□□□□□ -1.69
UBE4A-201ENST00000252108 TDP2O95551 362 aa4.52□□□□□ -1.69
UBE4A-201ENST00000252108 MRPL12P52815 198 aaKnown RBP4.52□□□□□ -1.69
UBE4A-201ENST00000252108 CLNS1AP54105 237 aaKnown RBP4.52□□□□□ -1.69
UBE4A-201ENST00000252108 SETDB1Q15047 1291 aa4.52□□□□□ -1.69
UBE4A-201ENST00000252108 SKIDA1Q1XH10 827 aa4.52□□□□□ -1.69
UBE4A-201ENST00000252108 RRAGAQ7L523 313 aa4.52□□□□□ -1.69
UBE4A-201ENST00000252108 IRF2BP2Q7Z5L9 587 aa4.52□□□□□ -1.69
UBE4A-201ENST00000252108 NEK8Q86SG6 692 aa4.52□□□□□ -1.69
UBE4A-201ENST00000252108 MTMR14Q8NCE2 650 aa4.52□□□□□ -1.69
UBE4A-201ENST00000252108 TTC16Q8NEE8 873 aa4.52□□□□□ -1.69
UBE4A-201ENST00000252108 SPATA4Q8NEY3 305 aa4.52□□□□□ -1.69
UBE4A-201ENST00000252108 SCFD1Q8WVM8 642 aa4.52□□□□□ -1.69
UBE4A-201ENST00000252108 INPP4AQ96PE3 977 aaPredicted RBP4.52□□□□□ -1.69
UBE4A-201ENST00000252108 HSD17B14Q9BPX1 270 aa4.52□□□□□ -1.69
UBE4A-201ENST00000252108 ATP5HO75947 161 aa4.52□□□□□ -1.69
UBE4A-201ENST00000252108 NEBLO76041 1014 aa4.52□□□□□ -1.69
UBE4A-201ENST00000252108 PRKCIP41743 596 aa4.52□□□□□ -1.69
UBE4A-201ENST00000252108 SMTNP53814 917 aa4.52□□□□□ -1.69
UBE4A-201ENST00000252108 MAPK7Q13164 816 aa4.52□□□□□ -1.69
UBE4A-201ENST00000252108 C1orf220Q5T0J3 134 aa4.52□□□□□ -1.69
UBE4A-201ENST00000252108 USP17L2Q6R6M4 530 aa4.52□□□□□ -1.69
UBE4A-201ENST00000252108 HEATR3Q7Z4Q2 680 aa4.52□□□□□ -1.69
UBE4A-201ENST00000252108 BBOF1Q8ND07 529 aa4.52□□□□□ -1.69
UBE4A-201ENST00000252108 FBF1Q8TES7 1133 aa4.52□□□□□ -1.69
UBE4A-201ENST00000252108 TBC1D22AQ8WUA7 517 aa4.52□□□□□ -1.69
UBE4A-201ENST00000252108 TGFBRAP1Q8WUH2 860 aa4.52□□□□□ -1.69
UBE4A-201ENST00000252108 UBLCP1Q8WVY7 318 aaPredicted RBP4.52□□□□□ -1.69
UBE4A-201ENST00000252108 C8orf37Q96NL8 207 aa4.52□□□□□ -1.69
UBE4A-201ENST00000252108 SH2D4AQ9H788 454 aa4.52□□□□□ -1.69
UBE4A-201ENST00000252108 KCNQ5Q9NR82 932 aa4.52□□□□□ -1.69
UBE4A-201ENST00000252108 LRWD1Q9UFC0 647 aa4.52□□□□□ -1.69
UBE4A-201ENST00000252108 AMFRQ9UKV5 643 aa4.52□□□□□ -1.69
UBE4A-201ENST00000252108 GRIN2DO15399 1336 aa4.51□□□□□ -1.69
UBE4A-201ENST00000252108 A0A1W2PRG0 241 aa4.51□□□□□ -1.69
UBE4A-201ENST00000252108 GMNCA6NCL1 334 aa4.51□□□□□ -1.69
UBE4A-201ENST00000252108 FAM187AA6NFU0 413 aa4.51□□□□□ -1.69
UBE4A-201ENST00000252108 DDTLA6NHG4 134 aaPredicted RBP4.51□□□□□ -1.69
UBE4A-201ENST00000252108 LRRIQ3A6PVS8 624 aaPredicted RBP4.51□□□□□ -1.69
UBE4A-201ENST00000252108 GSTA1P08263 222 aa4.51□□□□□ -1.69
UBE4A-201ENST00000252108 GHRP10912 638 aa4.51□□□□□ -1.69
UBE4A-201ENST00000252108 FERP16591 822 aa4.51□□□□□ -1.69
UBE4A-201ENST00000252108 CDC37Q16543 378 aaPredicted RBP4.51□□□□□ -1.69
UBE4A-201ENST00000252108 SEL1L2Q5TEA6 688 aa4.51□□□□□ -1.69
UBE4A-201ENST00000252108 DENND2CQ68D51 928 aa4.51□□□□□ -1.69
UBE4A-201ENST00000252108 COL23A1Q86Y22 540 aaPredicted RBP4.51□□□□□ -1.69
UBE4A-201ENST00000252108 ADGRF4Q8IZF3 695 aa4.51□□□□□ -1.69
UBE4A-201ENST00000252108 MORC4Q8TE76 937 aa4.51□□□□□ -1.69
UBE4A-201ENST00000252108 ZFP91Q96JP5 570 aaPredicted RBP4.51□□□□□ -1.69
UBE4A-201ENST00000252108 EYA3Q99504 573 aa4.51□□□□□ -1.69
UBE4A-201ENST00000252108 TLR10Q9BXR5 811 aa4.51□□□□□ -1.69
UBE4A-201ENST00000252108 NDST4Q9H3R1 872 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms