RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 TGFB1I1O43294 461 aa27.96■■■□□ 2.07
RAB40C-201ENST00000248139 RAD51CO43502 376 aa27.96■■■□□ 2.07
RAB40C-201ENST00000248139 IVLP07476 585 aa27.96■■■□□ 2.07
RAB40C-201ENST00000248139 MYCT1Q8N699 235 aa27.96■■■□□ 2.07
RAB40C-201ENST00000248139 TULP1O00294 542 aaPredicted RBP27.95■■■□□ 2.07
RAB40C-201ENST00000248139 GFPT2O94808 682 aa27.95■■■□□ 2.07
RAB40C-201ENST00000248139 MOXD1Q6UVY6 613 aa27.95■■■□□ 2.07
RAB40C-201ENST00000248139 NLGN1Q8N2Q7 840 aa27.95■■■□□ 2.07
RAB40C-201ENST00000248139 CSRNP1Q96S65 589 aa27.95■■■□□ 2.07
RAB40C-201ENST00000248139 TSKSQ9UJT2 592 aa27.95■■■□□ 2.07
RAB40C-201ENST00000248139 PDXKO00764 312 aa27.95■■■□□ 2.06
RAB40C-201ENST00000248139 CALUO43852 315 aaPredicted RBP27.95■■■□□ 2.06
RAB40C-201ENST00000248139 RPS6KA5O75582 802 aa27.95■■■□□ 2.06
RAB40C-201ENST00000248139 PLS1Q14651 629 aa27.95■■■□□ 2.06
RAB40C-201ENST00000248139 NRXN2Q9P2S2 1712 aa27.95■■■□□ 2.06
RAB40C-201ENST00000248139 CEP104O60308 925 aa27.95■■■□□ 2.06
RAB40C-201ENST00000248139 CHRNA5P30532 468 aa27.95■■■□□ 2.06
RAB40C-201ENST00000248139 HOXA7P31268 230 aaPredicted RBP27.95■■■□□ 2.06
RAB40C-201ENST00000248139 RPS6KA1Q15418 735 aa27.95■■■□□ 2.06
RAB40C-201ENST00000248139 RBM26Q5T8P6 1007 aaKnown RBP27.95■■■□□ 2.06
RAB40C-201ENST00000248139 STRIP1Q5VSL9 837 aa27.95■■■□□ 2.06
RAB40C-201ENST00000248139 EMBQ6PCB8 327 aa27.95■■■□□ 2.06
RAB40C-201ENST00000248139 ARHGAP27Q6ZUM4 889 aa27.95■■■□□ 2.06
RAB40C-201ENST00000248139 FAM20AQ96MK3 541 aa27.95■■■□□ 2.06
RAB40C-201ENST00000248139 DDX42Q86XP3 938 aaKnown RBP eCLIP27.94■■■□□ 2.06
RAB40C-201ENST00000248139 IFT20Q8IY31 132 aa27.94■■■□□ 2.06
RAB40C-201ENST00000248139 RUFY1Q96T51 708 aa27.94■■■□□ 2.06
RAB40C-201ENST00000248139 GDF3Q9NR23 364 aa27.94■■■□□ 2.06
RAB40C-201ENST00000248139 TYW1Q9NV66 732 aaKnown RBP27.94■■■□□ 2.06
RAB40C-201ENST00000248139 WRAP73Q9P2S5 460 aaPredicted RBP27.94■■■□□ 2.06
RAB40C-201ENST00000248139 TCP10L2B9ZVM9 353 aa27.94■■■□□ 2.06
RAB40C-201ENST00000248139 HSF2BPO75031 334 aa27.94■■■□□ 2.06
RAB40C-201ENST00000248139 SLITRK3O94933 977 aa27.94■■■□□ 2.06
RAB40C-201ENST00000248139 PDE6BP35913 854 aa27.94■■■□□ 2.06
RAB40C-201ENST00000248139 ATP1A2P50993 1020 aa27.94■■■□□ 2.06
RAB40C-201ENST00000248139 IRAK1P51617 712 aa27.94■■■□□ 2.06
RAB40C-201ENST00000248139 KRT27Q7Z3Y8 459 aa27.94■■■□□ 2.06
RAB40C-201ENST00000248139 RDH13Q8NBN7 331 aa27.94■■■□□ 2.06
RAB40C-201ENST00000248139 C10orf71Q711Q0 1435 aa27.93■■■□□ 2.06
RAB40C-201ENST00000248139 IGLV3-22A0A075B6J6 115 aa27.93■■■□□ 2.06
RAB40C-201ENST00000248139 CLRN2A0PK11 232 aa27.93■■■□□ 2.06
RAB40C-201ENST00000248139 TBX3O15119 743 aa27.93■■■□□ 2.06
RAB40C-201ENST00000248139 EPB41P11171 864 aaKnown RBP27.93■■■□□ 2.06
RAB40C-201ENST00000248139 MAEAQ7L5Y9 396 aa27.93■■■□□ 2.06
RAB40C-201ENST00000248139 USP38Q8NB14 1042 aa27.93■■■□□ 2.06
RAB40C-201ENST00000248139 GMCL1Q96IK5 515 aa27.93■■■□□ 2.06
RAB40C-201ENST00000248139 GBP6Q6ZN66 633 aa27.93■■■□□ 2.06
RAB40C-201ENST00000248139 U2AF1L4Q8WU68 220 aaKnown RBP27.93■■■□□ 2.06
RAB40C-201ENST00000248139 TAF4BQ92750 862 aa27.93■■■□□ 2.06
RAB40C-201ENST00000248139 PLCB1Q9NQ66 1216 aa27.93■■■□□ 2.06
RAB40C-201ENST00000248139 PKD2L1Q9P0L9 805 aa27.93■■■□□ 2.06
RAB40C-201ENST00000248139 FAM13AO94988 1023 aa27.92■■■□□ 2.06
RAB40C-201ENST00000248139 GMCL1P1Q8NEA9 526 aa27.92■■■□□ 2.06
RAB40C-201ENST00000248139 KIF4AO95239 1232 aa27.92■■■□□ 2.06
RAB40C-201ENST00000248139 EYA4O95677 639 aa27.92■■■□□ 2.06
RAB40C-201ENST00000248139 CYP2J2P51589 502 aa27.92■■■□□ 2.06
RAB40C-201ENST00000248139 OTOP1Q7RTM1 612 aa27.92■■■□□ 2.06
RAB40C-201ENST00000248139 TRMT1LQ7Z2T5 733 aaKnown RBP27.92■■■□□ 2.06
RAB40C-201ENST00000248139 SH3GL2Q99962 352 aa27.92■■■□□ 2.06
RAB40C-201ENST00000248139 DDX3XO00571 662 aaKnown RBP eCLIP27.91■■■□□ 2.062e-7■■■■■ 28.9
RAB40C-201ENST00000248139 FOSP01100 380 aaPredicted RBP27.91■■■□□ 2.06
RAB40C-201ENST00000248139 TRIM49P0CI25 452 aa27.91■■■□□ 2.06
RAB40C-201ENST00000248139 TRIM49CP0CI26 452 aa27.91■■■□□ 2.06
RAB40C-201ENST00000248139 LRCH2Q5VUJ6 765 aa27.91■■■□□ 2.06
RAB40C-201ENST00000248139 CAVIN3Q969G5 261 aa27.91■■■□□ 2.06
RAB40C-201ENST00000248139 ZMYM2Q9UBW7 1377 aa27.91■■■□□ 2.06
RAB40C-201ENST00000248139 CDAN1Q8IWY9 1227 aa27.91■■■□□ 2.06
RAB40C-201ENST00000248139 HSD17B14Q9BPX1 270 aa27.91■■■□□ 2.06
RAB40C-201ENST00000248139 TMEM51Q9NW97 253 aa27.91■■■□□ 2.06
RAB40C-201ENST00000248139 DDX39AO00148 427 aaKnown RBP27.9■■■□□ 2.06
RAB40C-201ENST00000248139 CIITAP33076 1130 aa27.9■■■□□ 2.06
RAB40C-201ENST00000248139 GNGT1P63211 74 aa27.9■■■□□ 2.06
RAB40C-201ENST00000248139 BANK1Q8NDB2 785 aa27.9■■■□□ 2.06
RAB40C-201ENST00000248139 COL11A2P13942 1736 aaPredicted RBP27.9■■■□□ 2.06
RAB40C-201ENST00000248139 ZNF233A6NK53 670 aa27.9■■■□□ 2.06
RAB40C-201ENST00000248139 GLE1Q53GS7 698 aaKnown RBP27.9■■■□□ 2.06
RAB40C-201ENST00000248139 FAM186BQ8IYM0 893 aa27.9■■■□□ 2.06
RAB40C-201ENST00000248139 METTL13Q8N6R0 699 aa27.9■■■□□ 2.06
RAB40C-201ENST00000248139 LRRC57Q8N9N7 239 aa27.9■■■□□ 2.06
RAB40C-201ENST00000248139 CAPS2Q9BXY5 557 aa27.9■■■□□ 2.06
RAB40C-201ENST00000248139 DDX47Q9H0S4 455 aaKnown RBP27.9■■■□□ 2.06
RAB40C-201ENST00000248139 OSGEPQ9NPF4 335 aa27.9■■■□□ 2.06
RAB40C-201ENST00000248139 ITGA4P13612 1032 aa27.89■■■□□ 2.06
RAB40C-201ENST00000248139 CCT5P48643 541 aa27.89■■■□□ 2.06
RAB40C-201ENST00000248139 RNF14Q9UBS8 474 aa27.89■■■□□ 2.06
RAB40C-201ENST00000248139 PPFIA4O75335 1185 aa27.89■■■□□ 2.05
RAB40C-201ENST00000248139 ERVK-9P63128 1117 aa27.89■■■□□ 2.05
RAB40C-201ENST00000248139 PDCLQ13371 301 aa27.89■■■□□ 2.05
RAB40C-201ENST00000248139 HLTFQ14527 1009 aaKnown RBP eCLIP27.89■■■□□ 2.05
RAB40C-201ENST00000248139 CBWD6Q4V339 395 aa27.89■■■□□ 2.05
RAB40C-201ENST00000248139 CBWD3Q5JTY5 395 aa27.89■■■□□ 2.05
RAB40C-201ENST00000248139 CBWD5Q5RIA9 395 aa27.89■■■□□ 2.05
RAB40C-201ENST00000248139 CFAP58Q5T655 872 aa27.89■■■□□ 2.05
RAB40C-201ENST00000248139 GLYCTKQ8IVS8 523 aa27.89■■■□□ 2.05
RAB40C-201ENST00000248139 TPCN2Q8NHX9 752 aa27.89■■■□□ 2.05
RAB40C-201ENST00000248139 PIK3R5Q8WYR1 880 aa27.89■■■□□ 2.05
RAB40C-201ENST00000248139 UTP3Q9NQZ2 479 aaKnown RBP eCLIP27.89■■■□□ 2.055e-7■■■■■ 225.8
RAB40C-201ENST00000248139 LRRN2O75325 713 aa27.88■■■□□ 2.05
RAB40C-201ENST00000248139 ABCB4P21439 1286 aa27.88■■■□□ 2.05
RAB40C-201ENST00000248139 RPL13P26373 211 aaKnown RBP27.88■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms