RNA–Protein interactions for RNA: ENST00000234179.6

PRKD3-201, Transcript of protein kinase D3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKD3, Length 5,900 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-201ENST00000234179 ASIC4Q96FT7 647 aa2.62□□□□□ -1.99
PRKD3-201ENST00000234179 PLEKHA4Q9H4M7 779 aa2.62□□□□□ -1.99
PRKD3-201ENST00000234179 JMJD4Q9H9V9 463 aa2.62□□□□□ -1.99
PRKD3-201ENST00000234179 DUSP12Q9UNI6 340 aa2.62□□□□□ -1.99
PRKD3-201ENST00000234179 MRPL42Q9Y6G3 142 aaKnown RBP2.62□□□□□ -1.99
PRKD3-201ENST00000234179 FAM186AA6NE01 2351 aa2.62□□□□□ -1.99
PRKD3-201ENST00000234179 PALM3A6NDB9 673 aaPredicted RBP2.61□□□□□ -1.99
PRKD3-201ENST00000234179 GAS2O43903 313 aaKnown RBP2.61□□□□□ -1.99
PRKD3-201ENST00000234179 FGF18O76093 207 aa2.61□□□□□ -1.99
PRKD3-201ENST00000234179 UPP2O95045 317 aa2.61□□□□□ -1.99
PRKD3-201ENST00000234179 PAPLNO95428 1278 aa2.61□□□□□ -1.99
PRKD3-201ENST00000234179 GHRP10912 638 aa2.61□□□□□ -1.99
PRKD3-201ENST00000234179 DMWDQ09019 674 aa2.61□□□□□ -1.99
PRKD3-201ENST00000234179 ELAVL2Q12926 359 aaKnown RBP2.61□□□□□ -1.99
PRKD3-201ENST00000234179 USH1GQ495M9 461 aa2.61□□□□□ -1.99
PRKD3-201ENST00000234179 MIS18BP1Q6P0N0 1132 aa2.61□□□□□ -1.99
PRKD3-201ENST00000234179 TMC7Q7Z402 723 aa2.61□□□□□ -1.99
PRKD3-201ENST00000234179 BBXQ8WY36 941 aaPredicted RBP2.61□□□□□ -1.99
PRKD3-201ENST00000234179 RPGRIP1Q96KN7 1286 aa2.61□□□□□ -1.99
PRKD3-201ENST00000234179 NAP1L4Q99733 375 aaKnown RBP2.61□□□□□ -1.99
PRKD3-201ENST00000234179 IGFLR1Q9H665 355 aa2.61□□□□□ -1.99
PRKD3-201ENST00000234179 ERVK-5Q9HDB9 667 aa2.61□□□□□ -1.99
PRKD3-201ENST00000234179 DLL3Q9NYJ7 618 aa2.61□□□□□ -1.99
PRKD3-201ENST00000234179 CLEC1BQ9P126 229 aa2.61□□□□□ -1.99
PRKD3-201ENST00000234179 CACNA1AO00555 2505 aa2.61□□□□□ -1.99
PRKD3-201ENST00000234179 ARHGEF15O94989 841 aa2.61□□□□□ -1.99
PRKD3-201ENST00000234179 FGAP02671 866 aa2.61□□□□□ -1.99
PRKD3-201ENST00000234179 ADH1AP07327 375 aa2.61□□□□□ -1.99
PRKD3-201ENST00000234179 ZNF286BP0CG31 522 aa2.61□□□□□ -1.99
PRKD3-201ENST00000234179 SLC16A2P36021 539 aa2.61□□□□□ -1.99
PRKD3-201ENST00000234179 DPP6P42658 865 aa2.61□□□□□ -1.99
PRKD3-201ENST00000234179 DNM2P50570 870 aa2.61□□□□□ -1.99
PRKD3-201ENST00000234179 TTBK2Q6IQ55 1244 aa2.61□□□□□ -1.99
PRKD3-201ENST00000234179 PDXDC2PQ6P474 469 aa2.61□□□□□ -1.99
PRKD3-201ENST00000234179 TMEM87BQ96K49 555 aa2.61□□□□□ -1.99
PRKD3-201ENST00000234179 KLHL5Q96PQ7 755 aa2.61□□□□□ -1.99
PRKD3-201ENST00000234179 BCO2Q9BYV7 579 aa2.61□□□□□ -1.99
PRKD3-201ENST00000234179 JPH1Q9HDC5 661 aaPredicted RBP2.61□□□□□ -1.99
PRKD3-201ENST00000234179 SLC2A4RGQ9NR83 387 aa2.61□□□□□ -1.99
PRKD3-201ENST00000234179 ZDHHC7Q9NXF8 308 aa2.61□□□□□ -1.99
PRKD3-201ENST00000234179 NCDNQ9UBB6 729 aa2.61□□□□□ -1.99
PRKD3-201ENST00000234179 EPS15L1Q9UBC2 864 aa2.61□□□□□ -1.99
PRKD3-201ENST00000234179 MAFFQ9ULX9 164 aa2.61□□□□□ -1.99
PRKD3-201ENST00000234179 PCDHB13Q9Y5F0 798 aa2.61□□□□□ -1.99
PRKD3-201ENST00000234179 FRMPD2Q68DX3 1309 aaPredicted RBP2.61□□□□□ -1.99
PRKD3-201ENST00000234179 PHLPP2Q6ZVD8 1323 aa2.61□□□□□ -1.99
PRKD3-201ENST00000234179 PTPRZ1P23471 2315 aaPredicted RBP2.61□□□□□ -1.99
PRKD3-201ENST00000234179 TBKBP1A7MCY6 615 aa2.61□□□□□ -1.99
PRKD3-201ENST00000234179 C9IYK1 514 aa2.61□□□□□ -1.99
PRKD3-201ENST00000234179 HNRNPA1P09651 372 aaKnown RBP eCLIP2.61□□□□□ -1.99
PRKD3-201ENST00000234179 CTSHP09668 335 aa2.61□□□□□ -1.99
PRKD3-201ENST00000234179 SFPQP23246 707 aaKnown RBP eCLIP2.61□□□□□ -1.99
PRKD3-201ENST00000234179 MLLT6P55198 1093 aaPredicted RBP2.61□□□□□ -1.99
PRKD3-201ENST00000234179 NCBP1Q09161 790 aaKnown RBP2.61□□□□□ -1.99
PRKD3-201ENST00000234179 POTEGQ6S5H5 508 aa2.61□□□□□ -1.99
PRKD3-201ENST00000234179 GLB1LQ6UWU2 654 aa2.61□□□□□ -1.99
PRKD3-201ENST00000234179 DDX53Q86TM3 631 aaKnown RBP2.61□□□□□ -1.99
PRKD3-201ENST00000234179 ZNF410Q86VK4 478 aa2.61□□□□□ -1.99
PRKD3-201ENST00000234179 NETO1Q8TDF5 533 aa2.61□□□□□ -1.99
PRKD3-201ENST00000234179 KHSRPQ92945 711 aaKnown RBP eCLIP2.61□□□□□ -1.992e-6■■■■□ 20.7
PRKD3-201ENST00000234179 RWDD1Q9H446 243 aaPredicted RBP2.61□□□□□ -1.99
PRKD3-201ENST00000234179 JADE2Q9NQC1 790 aa2.61□□□□□ -1.99
PRKD3-201ENST00000234179 SETD4Q9NVD3 440 aa2.61□□□□□ -1.99
PRKD3-201ENST00000234179 RBM28Q9NW13 759 aaKnown RBP2.61□□□□□ -1.99
PRKD3-201ENST00000234179 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP2.61□□□□□ -1.995e-6■■■■□ 26.7
PRKD3-201ENST00000234179 SLC9A2Q9UBY0 812 aa2.61□□□□□ -1.99
PRKD3-201ENST00000234179 DBR1Q9UK59 544 aaKnown RBP2.61□□□□□ -1.99
PRKD3-201ENST00000234179 RCAN3Q9UKA8 241 aa2.61□□□□□ -1.99
PRKD3-201ENST00000234179 UBIAD1Q9Y5Z9 338 aa2.61□□□□□ -1.99
PRKD3-201ENST00000234179 GBF1Q92538 1859 aa2.61□□□□□ -1.99
PRKD3-201ENST00000234179 MCM3APO60318 1980 aa2.61□□□□□ -1.99
PRKD3-201ENST00000234179 BAZ2AQ9UIF9 1905 aaKnown RBP2.61□□□□□ -1.99
PRKD3-201ENST00000234179 MAN2B1O00754 1011 aa2.61□□□□□ -1.99
PRKD3-201ENST00000234179 SRFP11831 508 aa2.61□□□□□ -1.99
PRKD3-201ENST00000234179 RLBP1P12271 317 aa2.61□□□□□ -1.99
PRKD3-201ENST00000234179 SFNP31947 248 aa2.61□□□□□ -1.99
PRKD3-201ENST00000234179 ALDH7A1P49419 539 aaKnown RBP2.61□□□□□ -1.99
PRKD3-201ENST00000234179 STAT5BP51692 787 aa2.61□□□□□ -1.99
PRKD3-201ENST00000234179 IRX5P78411 483 aaPredicted RBP2.61□□□□□ -1.99
PRKD3-201ENST00000234179 HNRNPUQ00839 825 aaKnown RBP eCLIP2.61□□□□□ -1.99
PRKD3-201ENST00000234179 HDAC1Q13547 482 aaPredicted RBP2.61□□□□□ -1.99
PRKD3-201ENST00000234179 HSDL1Q3SXM5 330 aa2.61□□□□□ -1.99
PRKD3-201ENST00000234179 KRT40Q6A162 431 aa2.61□□□□□ -1.99
PRKD3-201ENST00000234179 ZNF746Q6NUN9 644 aaPredicted RBP2.61□□□□□ -1.99
PRKD3-201ENST00000234179 GPR149Q86SP6 731 aa2.61□□□□□ -1.99
PRKD3-201ENST00000234179 C11orf74Q86VG3 221 aa2.61□□□□□ -1.99
PRKD3-201ENST00000234179 SLC39A11Q8N1S5 342 aa2.61□□□□□ -1.99
PRKD3-201ENST00000234179 BICD2Q8TD16 824 aa2.61□□□□□ -1.99
PRKD3-201ENST00000234179 S1PR5Q9H228 398 aa2.61□□□□□ -1.99
PRKD3-201ENST00000234179 OSBPL3Q9H4L5 887 aa2.61□□□□□ -1.99
PRKD3-201ENST00000234179 TMEM260Q9NX78 707 aa2.61□□□□□ -1.99
PRKD3-201ENST00000234179 ZMYM5Q9UJ78 669 aa2.61□□□□□ -1.99
PRKD3-201ENST00000234179 PADI3Q9ULW8 664 aa2.61□□□□□ -1.99
PRKD3-201ENST00000234179 TCF20Q9UGU0 1960 aaKnown RBP2.61□□□□□ -1.99
PRKD3-201ENST00000234179 CCDC196A0A1B0GTZ2 297 aa2.61□□□□□ -1.99
PRKD3-201ENST00000234179 CTSAP10619 480 aa2.61□□□□□ -1.99
PRKD3-201ENST00000234179 GLULP15104 373 aa2.61□□□□□ -1.99
PRKD3-201ENST00000234179 HOXA9P31269 272 aa2.61□□□□□ -1.99
PRKD3-201ENST00000234179 TCF7P36402 384 aaPredicted RBP2.61□□□□□ -1.99
PRKD3-201ENST00000234179 JAK3P52333 1124 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms