RNA–Protein interactions for RNA: ENST00000225655.5

PFN1-201, Transcript of profilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-201ENST00000225655 ZNF302Q9NR11 478 aa20.37■□□□□ 0.85
PFN1-201ENST00000225655 SMC3Q9UQE7 1217 aa20.37■□□□□ 0.85
PFN1-201ENST00000225655 TRPV2Q9Y5S1 764 aa20.37■□□□□ 0.85
PFN1-201ENST00000225655 COL1A2P08123 1366 aa20.36■□□□□ 0.85
PFN1-201ENST00000225655 KDM3AQ9Y4C1 1321 aa20.36■□□□□ 0.85
PFN1-201ENST00000225655 MYH9P35579 1960 aaKnown RBP20.36■□□□□ 0.85
PFN1-201ENST00000225655 HBP1O60381 514 aa20.36■□□□□ 0.85
PFN1-201ENST00000225655 JAK2O60674 1132 aa20.36■□□□□ 0.85
PFN1-201ENST00000225655 ST3GAL1Q11201 340 aa20.36■□□□□ 0.85
PFN1-201ENST00000225655 GALNT17Q6IS24 598 aa20.36■□□□□ 0.85
PFN1-201ENST00000225655 ZNF746Q6NUN9 644 aaPredicted RBP20.36■□□□□ 0.85
PFN1-201ENST00000225655 MRPL38Q96DV4 380 aaKnown RBP20.36■□□□□ 0.85
PFN1-201ENST00000225655 CELF4Q9BZC1 486 aaKnown RBP20.36■□□□□ 0.85
PFN1-201ENST00000225655 BRMS1Q9HCU9 246 aa20.36■□□□□ 0.85
PFN1-201ENST00000225655 VPS54Q9P1Q0 977 aa20.36■□□□□ 0.85
PFN1-201ENST00000225655 IGSF9BQ9UPX0 1349 aa20.35■□□□□ 0.85
PFN1-201ENST00000225655 BRWD1Q9NSI6 2320 aa20.35■□□□□ 0.85
PFN1-201ENST00000225655 H3BNC9 293 aa20.35■□□□□ 0.85
PFN1-201ENST00000225655 KLRC1P26715 233 aa20.35■□□□□ 0.85
PFN1-201ENST00000225655 CD52P31358 61 aa20.35■□□□□ 0.85
PFN1-201ENST00000225655 KRT76Q01546 638 aa20.35■□□□□ 0.85
PFN1-201ENST00000225655 TMEM62Q0P6H9 643 aa20.35■□□□□ 0.85
PFN1-201ENST00000225655 PTPROQ16827 1216 aa20.35■□□□□ 0.85
PFN1-201ENST00000225655 PRR16Q569H4 304 aa20.35■□□□□ 0.85
PFN1-201ENST00000225655 SWSAP1Q6NVH7 229 aa20.35■□□□□ 0.85
PFN1-201ENST00000225655 PDXDC2PQ6P474 469 aa20.35■□□□□ 0.85
PFN1-201ENST00000225655 TMEM192Q8IY95 271 aa20.35■□□□□ 0.85
PFN1-201ENST00000225655 SMAP1Q8IYB5 467 aaPredicted RBP20.35■□□□□ 0.85
PFN1-201ENST00000225655 RASGRP4Q8TDF6 673 aa20.35■□□□□ 0.85
PFN1-201ENST00000225655 FTHL17Q9BXU8 183 aa20.35■□□□□ 0.85
PFN1-201ENST00000225655 RC3H2Q9HBD1 1191 aaKnown RBP20.35■□□□□ 0.85
PFN1-201ENST00000225655 CUL4AQ13619 759 aa20.34■□□□□ 0.85
PFN1-201ENST00000225655 ZNF484Q5JVG2 852 aa20.34■□□□□ 0.85
PFN1-201ENST00000225655 FIBCD1Q8N539 461 aa20.34■□□□□ 0.85
PFN1-201ENST00000225655 LENG9Q96B70 501 aa20.34■□□□□ 0.85
PFN1-201ENST00000225655 INTS4Q96HW7 963 aaKnown RBP20.34■□□□□ 0.85
PFN1-201ENST00000225655 TCEAL9Q9UHQ7 104 aa20.34■□□□□ 0.85
PFN1-201ENST00000225655 MAFBQ9Y5Q3 323 aaPredicted RBP20.34■□□□□ 0.85
PFN1-201ENST00000225655 MUC3AQ02505 3323 aa20.34■□□□□ 0.85
PFN1-201ENST00000225655 BDP1A6H8Y1 2624 aa20.34■□□□□ 0.85
PFN1-201ENST00000225655 WDR81Q562E7 1941 aa20.33■□□□□ 0.85
PFN1-201ENST00000225655 ADGRA3Q8IWK6 1321 aa20.33■□□□□ 0.85
PFN1-201ENST00000225655 XIRP2A4UGR9 3374 aa20.33■□□□□ 0.85
PFN1-201ENST00000225655 ZBTB42B2RXF5 422 aa20.33■□□□□ 0.85
PFN1-201ENST00000225655 ATP4AP20648 1035 aa20.33■□□□□ 0.85
PFN1-201ENST00000225655 USP11P51784 963 aa20.33■□□□□ 0.85
PFN1-201ENST00000225655 GPM6BQ13491 265 aa20.33■□□□□ 0.85
PFN1-201ENST00000225655 SAFBQ15424 915 aaKnown RBP eCLIP20.33■□□□□ 0.85
PFN1-201ENST00000225655 FAM43BQ6ZT52 329 aaPredicted RBP20.33■□□□□ 0.85
PFN1-201ENST00000225655 LINC01599Q8WXQ3 324 aa20.33■□□□□ 0.85
PFN1-201ENST00000225655 BBXQ8WY36 941 aaPredicted RBP20.33■□□□□ 0.85
PFN1-201ENST00000225655 C8orf76Q96K31 380 aa20.33■□□□□ 0.85
PFN1-201ENST00000225655 UIMC1Q96RL1 719 aa20.33■□□□□ 0.85
PFN1-201ENST00000225655 PADI3Q9ULW8 664 aa20.33■□□□□ 0.85
PFN1-201ENST00000225655 PCDHA10Q9Y5I2 948 aa20.33■□□□□ 0.85
PFN1-201ENST00000225655 EVPLQ92817 2033 aa20.32■□□□□ 0.84
PFN1-201ENST00000225655 C5orf67F2Z3F1 127 aa20.32■□□□□ 0.84
PFN1-201ENST00000225655 PSAPP07602 524 aa20.32■□□□□ 0.84
PFN1-201ENST00000225655 FDPSP14324 419 aaKnown RBP20.32■□□□□ 0.84
PFN1-201ENST00000225655 ANP32AP39687 249 aaKnown RBP20.32■□□□□ 0.84
PFN1-201ENST00000225655 PAK2Q13177 524 aa20.32■□□□□ 0.84
PFN1-201ENST00000225655 RTN4RL1Q86UN2 441 aaPredicted RBP20.32■□□□□ 0.84
PFN1-201ENST00000225655 KIAA0319LQ8IZA0 1049 aa20.32■□□□□ 0.84
PFN1-201ENST00000225655 CRIPAKQ8N1N5 446 aa20.32■□□□□ 0.84
PFN1-201ENST00000225655 ZNF689Q96CS4 500 aaPredicted RBP20.32■□□□□ 0.84
PFN1-201ENST00000225655 NECAB3Q96P71 396 aaPredicted RBP20.32■□□□□ 0.84
PFN1-201ENST00000225655 RWDD3Q9Y3V2 267 aa20.32■□□□□ 0.84
PFN1-201ENST00000225655 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.31■□□□□ 0.84
PFN1-201ENST00000225655 EDIL3O43854 480 aa20.31■□□□□ 0.84
PFN1-201ENST00000225655 DGKIO75912 1065 aa20.31■□□□□ 0.84
PFN1-201ENST00000225655 RB1P06400 928 aa20.31■□□□□ 0.84
PFN1-201ENST00000225655 LINC00271P0C7V0 271 aa20.31■□□□□ 0.84
PFN1-201ENST00000225655 PDCP20941 246 aa20.31■□□□□ 0.84
PFN1-201ENST00000225655 GJB2P29033 226 aa20.31■□□□□ 0.84
PFN1-201ENST00000225655 TIGD5Q53EQ6 642 aa20.31■□□□□ 0.84
PFN1-201ENST00000225655 CKAP2LQ8IYA6 745 aa20.31■□□□□ 0.84
PFN1-201ENST00000225655 CLP1Q92989 425 aaKnown RBP20.31■□□□□ 0.84
PFN1-201ENST00000225655 PCDHA4Q9UN74 947 aa20.31■□□□□ 0.84
PFN1-201ENST00000225655 WDR64B1ANS9 1081 aa20.3■□□□□ 0.84
PFN1-201ENST00000225655 C22orf31O95567 290 aa20.3■□□□□ 0.84
PFN1-201ENST00000225655 CTNNB1P35222 781 aa20.3■□□□□ 0.84
PFN1-201ENST00000225655 BMPR1AP36894 532 aa20.3■□□□□ 0.84
PFN1-201ENST00000225655 BTG3Q14201 252 aaPredicted RBP20.3■□□□□ 0.84
PFN1-201ENST00000225655 NPAS4Q8IUM7 802 aa20.3■□□□□ 0.84
PFN1-201ENST00000225655 DAGLBQ8NCG7 672 aa20.3■□□□□ 0.84
PFN1-201ENST00000225655 AIFM3Q96NN9 605 aa20.3■□□□□ 0.84
PFN1-201ENST00000225655 RIT2Q99578 217 aa20.3■□□□□ 0.84
PFN1-201ENST00000225655 C11orf84Q9BUA3 381 aaPredicted RBP20.3■□□□□ 0.84
PFN1-201ENST00000225655 UBE2ZQ9H832 354 aaPredicted RBP20.3■□□□□ 0.84
PFN1-201ENST00000225655 DAXXQ9UER7 740 aaPredicted RBP20.3■□□□□ 0.84
PFN1-201ENST00000225655 MSH4O15457 936 aa20.29■□□□□ 0.84
PFN1-201ENST00000225655 GNL2Q13823 731 aaKnown RBP20.29■□□□□ 0.84
PFN1-201ENST00000225655 CMTR2Q8IYT2 770 aaKnown RBP20.29■□□□□ 0.84
PFN1-201ENST00000225655 BLIDQ8IZY5 108 aa20.29■□□□□ 0.84
PFN1-201ENST00000225655 BANK1Q8NDB2 785 aa20.29■□□□□ 0.84
PFN1-201ENST00000225655 SLC5A5Q92911 643 aa20.29■□□□□ 0.84
PFN1-201ENST00000225655 FAM167AQ96KS9 214 aa20.29■□□□□ 0.84
PFN1-201ENST00000225655 PHF20Q9BVI0 1012 aa20.29■□□□□ 0.84
PFN1-201ENST00000225655 TMX1Q9H3N1 280 aa20.29■□□□□ 0.84
PFN1-201ENST00000225655 GABBR1Q9UBS5 961 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms