RNA–Protein interactions for RNA: ENSMUST00000177588.7

Lig1-211, Transcript of DNA ligase 1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Lig1, Length 3,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig1-211ENSMUST00000177588 Zfp213E9QAW0 468 aa12.3□□□□□ -0.44
Lig1-211ENSMUST00000177588 Exoc4O35382 975 aa12.3□□□□□ -0.44
Lig1-211ENSMUST00000177588 Ercc5P35689 1170 aa12.3□□□□□ -0.44
Lig1-211ENSMUST00000177588 AaasP58742 546 aa12.3□□□□□ -0.44
Lig1-211ENSMUST00000177588 MagohP61327 146 aaKnown RBP12.3□□□□□ -0.44
Lig1-211ENSMUST00000177588 Klra9Q2TJJ8 266 aa12.3□□□□□ -0.44
Lig1-211ENSMUST00000177588 Gm5935Q497S0 212 aa12.3□□□□□ -0.44
Lig1-211ENSMUST00000177588 HnrnpdQ60668 355 aaKnown RBP12.3□□□□□ -0.44
Lig1-211ENSMUST00000177588 Insm1Q63ZV0 521 aa12.3□□□□□ -0.44
Lig1-211ENSMUST00000177588 Ddx31Q6NZQ2 687 aaKnown RBP12.3□□□□□ -0.44
Lig1-211ENSMUST00000177588 Xlr3bQ6P205 226 aa12.3□□□□□ -0.44
Lig1-211ENSMUST00000177588 Pja2Q80U04 707 aa12.3□□□□□ -0.44
Lig1-211ENSMUST00000177588 Gpr180Q8BPS4 441 aa12.3□□□□□ -0.44
Lig1-211ENSMUST00000177588 OscarQ8VBT3 265 aa12.3□□□□□ -0.44
Lig1-211ENSMUST00000177588 Chn1Q91V57 459 aa12.3□□□□□ -0.44
Lig1-211ENSMUST00000177588 Dr1Q91WV0 176 aa12.3□□□□□ -0.44
Lig1-211ENSMUST00000177588 MagohbQ9CQL1 146 aa12.3□□□□□ -0.44
Lig1-211ENSMUST00000177588 Stk11Q9WTK7 436 aa12.3□□□□□ -0.44
Lig1-211ENSMUST00000177588 Nfs1Q9Z1J3 459 aa12.3□□□□□ -0.44
Lig1-211ENSMUST00000177588 Adam7O35227 789 aa12.3□□□□□ -0.44
Lig1-211ENSMUST00000177588 Xirp1O70373 1129 aa12.3□□□□□ -0.44
Lig1-211ENSMUST00000177588 Mucl2P02815 138 aa12.3□□□□□ -0.44
Lig1-211ENSMUST00000177588 Znf367Q0VDT2 340 aa12.3□□□□□ -0.44
Lig1-211ENSMUST00000177588 Cul4aQ3TCH7 759 aa12.3□□□□□ -0.44
Lig1-211ENSMUST00000177588 Skap1Q3UUV5 355 aa12.3□□□□□ -0.44
Lig1-211ENSMUST00000177588 Chtf18Q8BIW9 969 aa12.3□□□□□ -0.44
Lig1-211ENSMUST00000177588 Pramef12Q9D2F1 463 aa12.3□□□□□ -0.44
Lig1-211ENSMUST00000177588 1700109H08RikQ9D9C0 210 aa12.3□□□□□ -0.44
Lig1-211ENSMUST00000177588 AdnpQ9Z103 1108 aaKnown RBP12.3□□□□□ -0.44
Lig1-211ENSMUST00000177588 Fam171a1A2ATK9 892 aa12.3□□□□□ -0.44
Lig1-211ENSMUST00000177588 Trappc11B2RXC1 1133 aa12.3□□□□□ -0.44
Lig1-211ENSMUST00000177588 R3hdm1E9Q9Q2 1135 aaKnown RBP12.3□□□□□ -0.44
Lig1-211ENSMUST00000177588 Mmp15O54732 657 aa12.3□□□□□ -0.44
Lig1-211ENSMUST00000177588 VimP20152 466 aaKnown RBP12.3□□□□□ -0.44
Lig1-211ENSMUST00000177588 Gna14P30677 355 aa12.3□□□□□ -0.44
Lig1-211ENSMUST00000177588 Eps15P42567 897 aa12.3□□□□□ -0.44
Lig1-211ENSMUST00000177588 Ephb4P54761 987 aa12.3□□□□□ -0.44
Lig1-211ENSMUST00000177588 Polr2fP61219 127 aa12.3□□□□□ -0.44
Lig1-211ENSMUST00000177588 Oxr1Q4KMM3 866 aa12.3□□□□□ -0.44
Lig1-211ENSMUST00000177588 Tm4sf1Q64302 202 aa12.3□□□□□ -0.44
Lig1-211ENSMUST00000177588 Aldh5a1Q8BWF0 523 aa12.3□□□□□ -0.44
Lig1-211ENSMUST00000177588 Rbm41Q8JZV4 413 aa12.3□□□□□ -0.44
Lig1-211ENSMUST00000177588 Mtmr4Q91XS1 1190 aa12.3□□□□□ -0.44
Lig1-211ENSMUST00000177588 Fam133bQ9CVI2 245 aaKnown RBP12.3□□□□□ -0.44
Lig1-211ENSMUST00000177588 Rabl3Q9D4V7 236 aa12.3□□□□□ -0.44
Lig1-211ENSMUST00000177588 2310002L09RikQ9D7L5 217 aa12.3□□□□□ -0.44
Lig1-211ENSMUST00000177588 Cacnb3P54285 484 aa12.29□□□□□ -0.44
Lig1-211ENSMUST00000177588 Tspyl5Q69ZB3 406 aa12.29□□□□□ -0.44
Lig1-211ENSMUST00000177588 DaglaQ6WQJ1 1044 aa12.29□□□□□ -0.44
Lig1-211ENSMUST00000177588 Cep104Q80V31 926 aa12.29□□□□□ -0.44
Lig1-211ENSMUST00000177588 Acad11Q80XL6 779 aa12.29□□□□□ -0.44
Lig1-211ENSMUST00000177588 Usp20Q8C6M1 916 aa12.29□□□□□ -0.44
Lig1-211ENSMUST00000177588 Fam228aQ8CDW1 299 aa12.29□□□□□ -0.44
Lig1-211ENSMUST00000177588 Ces1Q8VCC2 565 aa12.29□□□□□ -0.44
Lig1-211ENSMUST00000177588 Calml4Q91WQ9 153 aa12.29□□□□□ -0.44
Lig1-211ENSMUST00000177588 Q9CYI0 393 aa12.29□□□□□ -0.44
Lig1-211ENSMUST00000177588 Pacsin2Q9WVE8 486 aaKnown RBP12.29□□□□□ -0.44
Lig1-211ENSMUST00000177588 Zfp174B9EJW5 407 aa12.29□□□□□ -0.44
Lig1-211ENSMUST00000177588 Eif6O55135 245 aa12.29□□□□□ -0.44
Lig1-211ENSMUST00000177588 Spata18Q0P557 537 aa12.29□□□□□ -0.44
Lig1-211ENSMUST00000177588 Slc2a13Q3UHK1 637 aa12.29□□□□□ -0.44
Lig1-211ENSMUST00000177588 KhnynQ80U38 671 aa12.29□□□□□ -0.44
Lig1-211ENSMUST00000177588 Fgd5Q80UZ0 1219 aa12.29□□□□□ -0.44
Lig1-211ENSMUST00000177588 Snx14Q8BHY8 964 aa12.29□□□□□ -0.44
Lig1-211ENSMUST00000177588 RalylQ8BTF8 293 aa12.29□□□□□ -0.44
Lig1-211ENSMUST00000177588 Ccdc28aQ8CEI3 192 aa12.29□□□□□ -0.44
Lig1-211ENSMUST00000177588 CbsQ91WT9 561 aa12.29□□□□□ -0.44
Lig1-211ENSMUST00000177588 Ergic2Q9CR89 377 aa12.29□□□□□ -0.44
Lig1-211ENSMUST00000177588 Tmem191cQ9JJB1 302 aa12.29□□□□□ -0.44
Lig1-211ENSMUST00000177588 Trpc5Q9QX29 975 aa12.29□□□□□ -0.44
Lig1-211ENSMUST00000177588 Cacna2d3Q9Z1L5 1091 aa12.29□□□□□ -0.44
Lig1-211ENSMUST00000177588 Klrc1Q9Z202 244 aa12.29□□□□□ -0.44
Lig1-211ENSMUST00000177588 Gm5737A0A140LI11 423 aa12.28□□□□□ -0.44
Lig1-211ENSMUST00000177588 Dnaaf5B9EJR8 853 aa12.28□□□□□ -0.44
Lig1-211ENSMUST00000177588 Cfap70D3YVL2 1141 aa12.28□□□□□ -0.44
Lig1-211ENSMUST00000177588 UncxO08934 530 aa12.28□□□□□ -0.44
Lig1-211ENSMUST00000177588 Nrg3O35181 713 aa12.28□□□□□ -0.44
Lig1-211ENSMUST00000177588 H2afzP0C0S6 128 aa12.28□□□□□ -0.44
Lig1-211ENSMUST00000177588 Psmc2P46471 433 aa12.28□□□□□ -0.44
Lig1-211ENSMUST00000177588 Eef2P58252 858 aaKnown RBP12.28□□□□□ -0.44
Lig1-211ENSMUST00000177588 HelqQ2VPA6 1069 aa12.28□□□□□ -0.44
Lig1-211ENSMUST00000177588 H2afvQ3THW5 128 aa12.28□□□□□ -0.44
Lig1-211ENSMUST00000177588 Epha7Q61772 998 aa12.28□□□□□ -0.44
Lig1-211ENSMUST00000177588 Six2Q62232 296 aa12.28□□□□□ -0.44
Lig1-211ENSMUST00000177588 CrkQ64010 304 aa12.28□□□□□ -0.44
Lig1-211ENSMUST00000177588 Nr2e1Q64104 385 aa12.28□□□□□ -0.44
Lig1-211ENSMUST00000177588 Lrrcc1Q69ZB0 1026 aa12.28□□□□□ -0.44
Lig1-211ENSMUST00000177588 Zbtb39Q6PDK0 712 aa12.28□□□□□ -0.44
Lig1-211ENSMUST00000177588 1700016G14RikA0A286YCZ6 238 aa12.28□□□□□ -0.44
Lig1-211ENSMUST00000177588 Vmn2r68L7N2B3 851 aa12.28□□□□□ -0.44
Lig1-211ENSMUST00000177588 Zc3h18Q0P678 948 aaKnown RBP12.28□□□□□ -0.44
Lig1-211ENSMUST00000177588 Psmd1Q3TXS7 953 aa12.28□□□□□ -0.44
Lig1-211ENSMUST00000177588 Rasip1Q3U0S6 961 aa12.28□□□□□ -0.44
Lig1-211ENSMUST00000177588 Znf583Q3V080 568 aa12.28□□□□□ -0.44
Lig1-211ENSMUST00000177588 Rnaseh2bQ80ZV0 308 aa12.28□□□□□ -0.44
Lig1-211ENSMUST00000177588 DcakdQ8BHC4 231 aaKnown RBP12.28□□□□□ -0.44
Lig1-211ENSMUST00000177588 Tesk2Q8VCT9 570 aa12.28□□□□□ -0.44
Lig1-211ENSMUST00000177588 Synpo2Q91YE8 1087 aaKnown RBP12.28□□□□□ -0.44
Lig1-211ENSMUST00000177588 Cul5Q9D5V5 780 aa12.28□□□□□ -0.44
Lig1-211ENSMUST00000177588 Edf1Q9JMG1 148 aaKnown RBP12.28□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 14.5 ms