RNA–Protein interactions for RNA: ENSMUST00000165165.2

Col6a5-201, Transcript of Collagen alpha-5(VI) chain, mousemouse

TSL 5 BASIC

Gene Col6a5, Length 8,046 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5-201ENSMUST00000165165 Aldh1l2Q8K009 923 aa9.94□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Def8Q99J78 448 aa9.94□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Igf1rQ60751 1373 aa9.94□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Utp6Q8VCY6 597 aaKnown RBP9.94□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Taf11Q99JX1 211 aa9.94□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Calr3Q9D9Q6 380 aa9.94□□□□□ -0.82
Col6a5-201ENSMUST00000165165 1700006A11RikB9EHI3 544 aa9.94□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Cyp4f40G3UW81 524 aa9.94□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Armc7Q3UJZ3 198 aa9.94□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Aldh3b1Q80VQ0 468 aa9.94□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Lrrc8dQ8BGR2 859 aa9.94□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Mageb18Q8BQR7 327 aa9.94□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Pphln1Q8K2H1 381 aaKnown RBP9.94□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Haus3Q8QZX2 570 aa9.94□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Arl8aQ8VEH3 186 aa9.94□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Chmp1b1Q99LU0 199 aa9.94□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Krt6bQ9Z331 562 aa9.94□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Cdh2P15116 906 aa9.93□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Sesn1P58006 492 aa9.93□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Nsun7Q14AW5 724 aa9.93□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Znf473Q8BI67 892 aa9.93□□□□□ -0.82
Col6a5-201ENSMUST00000165165 P3h2Q8CG71 703 aa9.93□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Tada1Q99LM9 335 aa9.93□□□□□ -0.82
Col6a5-201ENSMUST00000165165 XpotQ9CRT8 963 aa9.93□□□□□ -0.82
Col6a5-201ENSMUST00000165165 MajinQ9D992 256 aa9.93□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Med23Q80YQ2 1367 aa9.93□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Lrch2Q3UMG5 773 aa9.93□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Afap1l2Q5DTU0 825 aa9.93□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Gm7247Q6UY52 187 aa9.93□□□□□ -0.82
Col6a5-201ENSMUST00000165165 PhkbQ7TSH2 1085 aa9.93□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Cwf19l2Q8BG79 887 aaKnown RBP9.93□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Chmp2bQ8BJF9 213 aa9.93□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Tgif2lx2Q8K5B9 231 aa9.93□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Fip1l1Q9D824 581 aaKnown RBP9.93□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Mrpl46Q9EQI8 283 aa9.93□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Plod1Q9R0E2 728 aa9.93□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Hic1Q9R1Y5 733 aa9.93□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Tnni1Q9WUZ5 187 aa9.93□□□□□ -0.82
Col6a5-201ENSMUST00000165165 4930444G20RikD3Z741 495 aa9.93□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Utp14bQ6EJB6 756 aaKnown RBP9.93□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Smg5Q6ZPY2 1017 aa9.93□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Fbxo11Q7TPD1 930 aaKnown RBP9.93□□□□□ -0.82
Col6a5-201ENSMUST00000165165 1700001J03RikQ80ZR8 219 aa9.93□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Rps6ka5Q8C050 863 aa9.93□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Uba6Q8C7R4 1053 aa9.93□□□□□ -0.82
Col6a5-201ENSMUST00000165165 FtcdQ91XD4 541 aa9.93□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Ndufa5Q9CPP6 116 aa9.93□□□□□ -0.82
Col6a5-201ENSMUST00000165165 4930519G04RikQ9CPT7 205 aa9.93□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Nup50Q9JIH2 466 aaKnown RBP9.93□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Slc2a5Q9WV38 501 aa9.93□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Hdac6Q9Z2V5 1149 aa9.93□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Fam81bA0A140LI28 432 aa9.93□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Mup5P11591 180 aa9.93□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Apoa1Q00623 264 aa9.93□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Ino80dQ66JY2 873 aaKnown RBP9.93□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Acad11Q80XL6 779 aa9.93□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Klhl24Q8BRG6 600 aa9.93□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Slc9a5B2RXE2 898 aa9.93□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Pgrmc1O55022 195 aa9.93□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Myo1aO88329 1043 aa9.93□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Cyp24a1Q64441 514 aa9.93□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Smyd3Q9CWR2 428 aa9.93□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Syngap1F6SEU4 1340 aa9.93□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Tcof1O08784 1320 aaKnown RBP9.93□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Maml3D4QGC2 1135 aa9.93□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Rad51bO35719 350 aa9.93□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Arl4cP61208 192 aa9.93□□□□□ -0.82
Col6a5-201ENSMUST00000165165 MagohP61327 146 aaKnown RBP9.93□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Atp8b1Q148W0 1251 aa9.93□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Ddb1Q3U1J4 1140 aaKnown RBP9.93□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Olfml2bQ3V1G4 746 aa9.93□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Ifit3Q64345 403 aa9.93□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Atp1a3Q6PIC6 1013 aa9.93□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Zscan22Q8BGS5 496 aa9.93□□□□□ -0.82
Col6a5-201ENSMUST00000165165 MagohbQ9CQL1 146 aa9.93□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Setd6Q9CWY3 473 aa9.93□□□□□ -0.82
Col6a5-201ENSMUST00000165165 NbnQ9R207 751 aa9.93□□□□□ -0.82
Col6a5-201ENSMUST00000165165 FynP39688 537 aa9.93□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Ppm1aP49443 382 aa9.93□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Smad5P97454 465 aa9.93□□□□□ -0.82
Col6a5-201ENSMUST00000165165 IqcmQ149I8 489 aa9.93□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Vil1Q62468 827 aa9.93□□□□□ -0.82
Col6a5-201ENSMUST00000165165 BegainQ68EF6 600 aa9.93□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Tmem191cQ9JJB1 302 aa9.93□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Cul3Q9JLV5 768 aa9.93□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Kcnb2A6H8H5 907 aa9.92□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Gm16430A6X8J1 155 aa9.92□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Gad1P48318 593 aa9.92□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Asap3Q5U464 904 aa9.92□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Rasa3Q60790 834 aa9.92□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Zbtb17Q60821 794 aa9.92□□□□□ -0.82
Col6a5-201ENSMUST00000165165 FntaQ61239 377 aa9.92□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Krt39Q6IFX4 482 aa9.92□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Dpp8Q80YA7 892 aa9.92□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Nup93Q8BJ71 819 aaKnown RBP9.92□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Kcns3Q8BQZ8 491 aa9.92□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Ccdc81Q9D5W4 654 aa9.92□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Rwdd2aQ9D9S3 292 aa9.92□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Chek2Q9Z265 546 aa9.92□□□□□ -0.82
Col6a5-201ENSMUST00000165165 Pramef20B1ARV6 477 aa9.92□□□□□ -0.82
Retrieved 100 of 22,080 RNA–protein pairs in 37.2 ms