RNA–Protein interactions for RNA: ENSMUST00000111047.8

Bdnf-207, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 4,042 nt, Biotype protein coding, Subcellular localisation Dendrite .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-207ENSMUST00000111047 E330017A01RikQ8BU47 192 aa8.14□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Q8BWG4 1187 aa8.14□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Slc9b1Q8C0X2 565 aa8.14□□□□□ -1.11
Bdnf-207ENSMUST00000111047 SucoQ8C341 1250 aa8.14□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Ccdc15Q8C9M2 810 aa8.14□□□□□ -1.11
Bdnf-207ENSMUST00000111047 PdxkQ8K183 312 aa8.14□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Chn1Q91V57 459 aa8.14□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Mrpl11Q9CQF0 192 aaKnown RBP8.14□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Ddx47Q9CWX9 455 aaKnown RBP8.14□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Capn9Q9D805 690 aa8.14□□□□□ -1.11
Bdnf-207ENSMUST00000111047 PpihQ9D868 188 aa8.14□□□□□ -1.11
Bdnf-207ENSMUST00000111047 LrmdaQ9D9B4 229 aa8.14□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Mpp3O88910 568 aa8.14□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Kctd16Q5DTY9 427 aa8.14□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Asap3Q5U464 904 aa8.14□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Mcf2lQ64096 1149 aa8.14□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Ccdc186Q8C9S4 917 aa8.14□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Calcoco1Q8CGU1 691 aa8.14□□□□□ -1.11
Bdnf-207ENSMUST00000111047 ArpinQ9D0A3 226 aa8.14□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Hsd3b7Q9EQC1 369 aa8.14□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Krt71Q9R0H5 524 aa8.14□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Lrp5Q91VN0 1614 aa8.14□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Gm5737A0A140LI11 423 aa8.14□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Lrrc74aA0A1Y7VMD6 494 aa8.14□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Gimap9G3X987 291 aa8.14□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Eftud2O08810 971 aaKnown RBP8.14□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Cyp11b2P15539 500 aa8.14□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Psmc6P62334 389 aa8.14□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Atp8a1P70704 1164 aa8.14□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Acot6Q32Q92 419 aa8.14□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Znf697Q569E7 569 aa8.14□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Mtus1Q5HZI1 1210 aa8.14□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Ccdc92bQ5SUE3 299 aa8.14□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Churc1Q6DG52 112 aa8.14□□□□□ -1.11
Bdnf-207ENSMUST00000111047 SugctQ7TNE1 436 aa8.14□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Apbb1ipQ8R5A3 670 aa8.14□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Oxnad1Q8VE38 311 aa8.14□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Alg1Q921Q3 482 aa8.14□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Lrrc57Q9D1G5 239 aa8.14□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Drap1Q9D6N5 205 aa8.14□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Usp14Q9JMA1 493 aaKnown RBP8.14□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Acot3Q9QYR7 432 aa8.14□□□□□ -1.11
Bdnf-207ENSMUST00000111047 ArcQ9WV31 396 aa8.14□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Tjp2Q9Z0U1 1167 aaKnown RBP8.14□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Lrrc38A2VDH3 298 aa8.13□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Clcn6O35454 870 aa8.13□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Ercc5P35689 1170 aa8.13□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Zmym1Q3TJB1 983 aa8.13□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Foxd1Q61345 456 aa8.13□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Sin3bQ62141 1098 aa8.13□□□□□ -1.11
Bdnf-207ENSMUST00000111047 PnocQ64387 187 aa8.13□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Best3Q6H1V1 669 aa8.13□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Psmd5Q8BJY1 504 aa8.13□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Kctd6Q8BNL5 237 aa8.13□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Parp10Q8CIE4 960 aa8.13□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Rfc4Q99J62 364 aa8.13□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Mcur1Q9CXD6 340 aa8.13□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Pabpc6Q9D4E6 643 aaKnown RBP8.13□□□□□ -1.11
Bdnf-207ENSMUST00000111047 4921524L21RikQ9D5T2 438 aa8.13□□□□□ -1.11
Bdnf-207ENSMUST00000111047 AvenQ9D9K3 342 aa8.13□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Slc5a4aQ9ET37 656 aa8.13□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Pacsin2Q9WVE8 486 aaKnown RBP8.13□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Kank3Q9Z1P7 791 aa8.13□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Sipa1l3G3X9J0 1776 aa8.13□□□□□ -1.11
Bdnf-207ENSMUST00000111047 CatspereP0DP43 985 aa8.13□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Hspa1lP16627 641 aa8.13□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Sema3eP70275 775 aa8.13□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Tmprss11aQ3UQ41 389 aa8.13□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Sfi1Q3UZY0 1216 aaKnown RBP8.13□□□□□ -1.11
Bdnf-207ENSMUST00000111047 1810065E05RikQ5NC41 235 aa8.13□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Retreg2Q6NS82 541 aa8.13□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Sap130Q8BIH0 1057 aa8.13□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Chtf18Q8BIW9 969 aa8.13□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Bhmt2Q91WS4 363 aa8.13□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Llcfc1Q9D9P8 108 aa8.13□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Tnip1Q9WUU8 647 aa8.13□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Cog1Q9Z160 980 aa8.13□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Osbpl9A2A8Z1 736 aa8.13□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Akr1b10G5E895 316 aa8.13□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Hsd17b1P51656 344 aa8.13□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Tmem165P52875 323 aa8.13□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Stmn4P63042 189 aa8.13□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Frmd8Q3UFK8 466 aa8.13□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Ddx49Q4FZF3 480 aaKnown RBP8.13□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Slc30a9Q5IRJ6 567 aa8.13□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Peg10Q7TN75 958 aaKnown RBP8.13□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Cyp26b1Q811W2 512 aa8.13□□□□□ -1.11
Bdnf-207ENSMUST00000111047 P2ry10Q8BFU7 328 aa8.13□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Skor1Q8BX46 964 aa8.13□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Acat1Q8QZT1 424 aa8.13□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Cse1lQ9ERK4 971 aaKnown RBP8.13□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Jag1Q9QXX0 1218 aa8.13□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Cetn2Q9R1K9 172 aa8.13□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Proca1B0QZF7 307 aa8.13□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Krt36B1AQ75 473 aa8.13□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Nova2D3YVV7 556 aaKnown RBP8.13□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Serpinb8O08800 374 aaKnown RBP8.13□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Stk10O55098 966 aa8.13□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Ephb4P54761 987 aa8.13□□□□□ -1.11
Bdnf-207ENSMUST00000111047 MlxipQ2VPU4 917 aa8.13□□□□□ -1.11
Retrieved 100 of 22,080 RNA–protein pairs in 13.9 ms