RNA–Protein interactions for RNA: ENSMUST00000106035.7

Ccdc28b-202, Transcript of Coiled-coil domain-containing protein 28B, mousemouse

TSL 1 (best) BASIC

Gene Ccdc28b, Length 821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28b-202ENSMUST00000106035 Epha7Q61772 998 aa13.74□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Kctd12bQ8C7J6 292 aa13.74□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Pcdhb12Q91Y07 789 aa13.74□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Dnajc19Q9CQV7 116 aa13.74□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Pramef12Q9D2F1 463 aa13.74□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 AacsQ9D2R0 672 aa13.74□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Chmp4cQ9D7F7 232 aa13.74□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Nr1h3Q9Z0Y9 445 aa13.74□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Ect2lA0A140LIP2 953 aa13.73□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Rsbn1lD3Z0K6 821 aa13.73□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Pde6bP23440 856 aa13.73□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 IppP28575 584 aa13.73□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Dlg3P70175 849 aa13.73□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Stk11ipQ3TAA7 1072 aa13.73□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Rufy4Q3TYX8 563 aa13.73□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Rsph3aQ3UFY4 516 aa13.73□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Enpp3Q6DYE8 874 aa13.73□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Colgalt2Q6NVG7 625 aa13.73□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Trak2Q6P9N8 913 aa13.73□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Drc7Q6V3W6 876 aa13.73□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Slc17a8Q8BFU8 601 aa13.73□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Npas4Q8BGD7 802 aa13.73□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Tceal5Q8CCT4 200 aa13.73□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Bag4Q8CI61 457 aa13.73□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Mettl5Q8K1A0 209 aa13.73□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Evc2Q8K1G2 1220 aa13.73□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 KinQ8K339 391 aa13.73□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Defb36Q8K3U4 67 aa13.73□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Ppp2r5dQ91V89 594 aa13.73□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 VillQ91YD6 859 aa13.73□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Rsph3bQ9DA80 389 aa13.73□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Vmn1r65Q9EPS7 332 aa13.73□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Dnajb7Q9QYI8 312 aa13.73□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Hs6st3Q9QYK4 470 aa13.73□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Eif2ak1Q9Z2R9 619 aa13.73□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Irs2P81122 1321 aa13.72□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 TrioQ0KL02 3102 aa13.72□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Slc16a6B1AT66 607 aa13.72□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Atp2b1G5E829 1220 aa13.72□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Smarce1O54941 411 aaKnown RBP13.72□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Rnaseh1O70338 285 aa13.72□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Smpd2O70572 419 aa13.72□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Ca3P16015 260 aa13.72□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 MarcksP26645 309 aaKnown RBP13.72□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Ccr5P51682 354 aa13.72□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Clcn3P51791 818 aa13.72□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 CebpaP53566 359 aa13.72□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Sox9Q04887 507 aa13.72□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Gse1Q3U3C9 1213 aa13.72□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Uimc1Q5U5Q9 727 aa13.72□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Suz12Q80U70 741 aaKnown RBP13.72□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Tsr2Q8C8T8 191 aa13.72□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 GlyctkQ8QZY2 523 aa13.72□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Ces4aQ8R0W5 563 aa13.72□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Terf2ipQ91VL8 393 aa13.72□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Tmem206Q9D771 350 aa13.72□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Rab27aQ9ERI2 221 aa13.72□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Gucy2dA0A0U1RPR8 1117 aa13.71□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Dcpp3L7N259 170 aa13.71□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Eef2kO08796 724 aa13.71□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Per1O35973 1291 aa13.71□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Lamp2P17047 415 aa13.71□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Bcat1P24288 386 aa13.71□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 SarsP26638 512 aaKnown RBP13.71□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Cyp17a1P27786 507 aa13.71□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Dnm2P39054 870 aaKnown RBP13.71□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 MafP54843 370 aa13.71□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Xkr4Q5GH67 647 aa13.71□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Kcnj11Q61743 390 aa13.71□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Celf6Q7TN33 460 aaKnown RBP13.71□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 PodnQ7TQ62 611 aa13.71□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Sestd1Q80UK0 696 aa13.71□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Pnma1Q8C1C8 353 aa13.71□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Slc15a5Q8CBB2 566 aa13.71□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Mettl24Q8CCB5 363 aa13.71□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Znf445Q8R2V3 986 aa13.71□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Mfsd5Q921Y4 450 aa13.71□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 NapaQ9DB05 295 aa13.71□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Cd274Q9EP73 290 aa13.71□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 PorcnQ9JJJ7 461 aa13.71□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Extl3Q9WVL6 918 aa13.71□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Gm7173A0A0G2JEB6 3132 aa13.71□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 PargO88622 969 aaKnown RBP13.7□□□□□ -0.22
Ccdc28b-202ENSMUST00000106035 DsppP97399 934 aa13.7□□□□□ -0.22
Ccdc28b-202ENSMUST00000106035 Casp7P97864 303 aa13.7□□□□□ -0.22
Ccdc28b-202ENSMUST00000106035 Snx27Q3UHD6 539 aa13.7□□□□□ -0.22
Ccdc28b-202ENSMUST00000106035 Psg29Q3URN6 468 aa13.7□□□□□ -0.22
Ccdc28b-202ENSMUST00000106035 Mfhas1Q3V1N1 1048 aa13.7□□□□□ -0.22
Ccdc28b-202ENSMUST00000106035 Spdye4aQ5IBH6 268 aa13.7□□□□□ -0.22
Ccdc28b-202ENSMUST00000106035 Raver2Q7TPD6 673 aa13.7□□□□□ -0.22
Ccdc28b-202ENSMUST00000106035 Kansl1Q80TG1 1036 aaKnown RBP13.7□□□□□ -0.22
Ccdc28b-202ENSMUST00000106035 Trit1Q80UN9 467 aa13.7□□□□□ -0.22
Ccdc28b-202ENSMUST00000106035 Acnat2Q8BGG9 420 aa13.7□□□□□ -0.22
Ccdc28b-202ENSMUST00000106035 Gprc5aQ8BHL4 356 aa13.7□□□□□ -0.22
Ccdc28b-202ENSMUST00000106035 Sbk1Q8QZX0 417 aa13.7□□□□□ -0.22
Ccdc28b-202ENSMUST00000106035 Pramel1Q99MW3 458 aa13.7□□□□□ -0.22
Ccdc28b-202ENSMUST00000106035 Tlr6Q9EPW9 795 aa13.7□□□□□ -0.22
Ccdc28b-202ENSMUST00000106035 Akt3Q9WUA6 479 aa13.7□□□□□ -0.22
Ccdc28b-202ENSMUST00000106035 Sucla2Q9Z2I9 463 aa13.7□□□□□ -0.22
Ccdc28b-202ENSMUST00000106035 A0A0U1RNP2 1173 aa13.69□□□□□ -0.22
Retrieved 100 of 22,080 RNA–protein pairs in 27.9 ms