RNA–Protein interactions for RNA: ENSMUST00000062439.4

Ccdc54-201, Transcript of Coiled-coil domain-containing protein 54, mousemouse

APPRIS P1 BASIC

Gene Ccdc54, Length 1,296 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc54-201ENSMUST00000062439 Kif21bQ9QXL1 1668 aa9.12□□□□□ -0.95
Ccdc54-201ENSMUST00000062439 Ltbp4Q8K4G1 1666 aa9.11□□□□□ -0.95
Ccdc54-201ENSMUST00000062439 Gm5093E9PZB3 174 aa9.11□□□□□ -0.95
Ccdc54-201ENSMUST00000062439 Cyp21P03940 487 aa9.11□□□□□ -0.95
Ccdc54-201ENSMUST00000062439 PlaaP27612 794 aa9.11□□□□□ -0.95
Ccdc54-201ENSMUST00000062439 Eci1P42125 289 aaKnown RBP9.11□□□□□ -0.95
Ccdc54-201ENSMUST00000062439 Foxp2P58463 714 aa9.11□□□□□ -0.95
Ccdc54-201ENSMUST00000062439 Hhipl1Q14DK5 791 aa9.11□□□□□ -0.95
Ccdc54-201ENSMUST00000062439 LchnQ3UHG7 455 aa9.11□□□□□ -0.95
Ccdc54-201ENSMUST00000062439 Ifnl2Q4VK74 193 aa9.11□□□□□ -0.95
Ccdc54-201ENSMUST00000062439 PkdccQ5RJI4 492 aa9.11□□□□□ -0.95
Ccdc54-201ENSMUST00000062439 Fgfr3Q61851 801 aa9.11□□□□□ -0.95
Ccdc54-201ENSMUST00000062439 Cyp2c54Q6XVG2 490 aa9.11□□□□□ -0.95
Ccdc54-201ENSMUST00000062439 Mib1Q80SY4 1006 aa9.11□□□□□ -0.95
Ccdc54-201ENSMUST00000062439 C2cd2lQ80X80 706 aa9.11□□□□□ -0.95
Ccdc54-201ENSMUST00000062439 Vps37dQ810I0 261 aa9.11□□□□□ -0.95
Ccdc54-201ENSMUST00000062439 Pik3cbQ8BTI9 1064 aa9.11□□□□□ -0.95
Ccdc54-201ENSMUST00000062439 Terb1Q8C0V1 768 aa9.11□□□□□ -0.95
Ccdc54-201ENSMUST00000062439 Spice1Q8C804 860 aa9.11□□□□□ -0.95
Ccdc54-201ENSMUST00000062439 Brf1Q8CFK2 676 aa9.11□□□□□ -0.95
Ccdc54-201ENSMUST00000062439 Inpp5bQ8K337 993 aa9.11□□□□□ -0.95
Ccdc54-201ENSMUST00000062439 Upb1Q8VC97 393 aa9.11□□□□□ -0.95
Ccdc54-201ENSMUST00000062439 MtpapQ9D0D3 585 aaKnown RBP9.11□□□□□ -0.95
Ccdc54-201ENSMUST00000062439 MrrfQ9D6S7 262 aaKnown RBP9.11□□□□□ -0.95
Ccdc54-201ENSMUST00000062439 Actl7bQ9QY83 418 aa9.11□□□□□ -0.95
Ccdc54-201ENSMUST00000062439 Itsn1Q9Z0R4 1714 aa9.11□□□□□ -0.95
Ccdc54-201ENSMUST00000062439 Ylpm1Q9R0I7 1386 aaKnown RBP9.11□□□□□ -0.95
Ccdc54-201ENSMUST00000062439 Iqgap3F8VQ29 1632 aa9.1□□□□□ -0.95
Ccdc54-201ENSMUST00000062439 1700003F12RikA2AKE5 210 aa9.1□□□□□ -0.95
Ccdc54-201ENSMUST00000062439 Adamtsl5D3Z689 485 aa9.1□□□□□ -0.95
Ccdc54-201ENSMUST00000062439 Kpna6O35345 536 aa9.1□□□□□ -0.95
Ccdc54-201ENSMUST00000062439 Map4P27546 1125 aaKnown RBP9.1□□□□□ -0.95
Ccdc54-201ENSMUST00000062439 HdgfP51859 237 aaKnown RBP9.1□□□□□ -0.95
Ccdc54-201ENSMUST00000062439 Tshz1Q5DTH5 1084 aa9.1□□□□□ -0.95
Ccdc54-201ENSMUST00000062439 E2f7Q6S7F2 904 aa9.1□□□□□ -0.95
Ccdc54-201ENSMUST00000062439 Plekhm2Q80TQ5 1018 aa9.1□□□□□ -0.95
Ccdc54-201ENSMUST00000062439 Kcmf1Q80UY2 381 aa9.1□□□□□ -0.95
Ccdc54-201ENSMUST00000062439 Gtf3c4Q8BMQ2 817 aaKnown RBP9.1□□□□□ -0.95
Ccdc54-201ENSMUST00000062439 Rps19Q9CZX8 145 aaKnown RBP9.1□□□□□ -0.95
Ccdc54-201ENSMUST00000062439 CmipQ9D486 773 aa9.1□□□□□ -0.95
Ccdc54-201ENSMUST00000062439 ItpaQ9D892 198 aa9.1□□□□□ -0.95
Ccdc54-201ENSMUST00000062439 Plscr2Q9DCW2 307 aa9.1□□□□□ -0.95
Ccdc54-201ENSMUST00000062439 Ncoa1P70365 1447 aa9.1□□□□□ -0.95
Ccdc54-201ENSMUST00000062439 Rims2Q9EQZ7 1530 aa9.1□□□□□ -0.95
Ccdc54-201ENSMUST00000062439 Zfp644E9QA22 1323 aa9.09□□□□□ -0.95
Ccdc54-201ENSMUST00000062439 Myom3A2ABU4 1439 aa9.09□□□□□ -0.95
Ccdc54-201ENSMUST00000062439 Kbtbd7G5E8C2 690 aa9.09□□□□□ -0.95
Ccdc54-201ENSMUST00000062439 Best1O88870 551 aa9.09□□□□□ -0.95
Ccdc54-201ENSMUST00000062439 Clec2lP0C7M9 211 aa9.09□□□□□ -0.95
Ccdc54-201ENSMUST00000062439 Cnr2P47936 347 aa9.09□□□□□ -0.95
Ccdc54-201ENSMUST00000062439 RpiaP47968 303 aa9.09□□□□□ -0.95
Ccdc54-201ENSMUST00000062439 Cpne7Q0VE82 557 aa9.09□□□□□ -0.95
Ccdc54-201ENSMUST00000062439 Eepd1Q3TGW2 569 aa9.09□□□□□ -0.95
Ccdc54-201ENSMUST00000062439 Trappc9Q3U0M1 1148 aa9.09□□□□□ -0.95
Ccdc54-201ENSMUST00000062439 Foxb2Q64733 428 aa9.09□□□□□ -0.95
Ccdc54-201ENSMUST00000062439 Rcbtb1Q6NXM2 531 aa9.09□□□□□ -0.95
Ccdc54-201ENSMUST00000062439 Ercc6lQ8BHK9 1240 aa9.09□□□□□ -0.95
Ccdc54-201ENSMUST00000062439 Csgalnact1Q8BJQ9 530 aa9.09□□□□□ -0.95
Ccdc54-201ENSMUST00000062439 Tctn1Q8BZ64 593 aa9.09□□□□□ -0.95
Ccdc54-201ENSMUST00000062439 Klhdc4Q921I2 584 aa9.09□□□□□ -0.95
Ccdc54-201ENSMUST00000062439 Trim13Q9CYB0 407 aa9.09□□□□□ -0.95
Ccdc54-201ENSMUST00000062439 Slc6a19Q9D687 634 aa9.09□□□□□ -0.95
Ccdc54-201ENSMUST00000062439 Asb12Q9D738 308 aa9.09□□□□□ -0.95
Ccdc54-201ENSMUST00000062439 1700069L16RikQ9D9H5 109 aa9.09□□□□□ -0.95
Ccdc54-201ENSMUST00000062439 Pdpk1Q9Z2A0 559 aa9.09□□□□□ -0.95
Ccdc54-201ENSMUST00000062439 Nsd2Q8BVE8 1365 aa9.09□□□□□ -0.95
Ccdc54-201ENSMUST00000062439 Ttc21bQ0HA38 1315 aa9.08□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 TnksQ6PFX9 1320 aa9.08□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 Stat5aP42230 793 aa9.08□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 Vwa5b2Q3UR50 1248 aa9.08□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 CybbQ61093 570 aa9.08□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 Epha7Q61772 998 aa9.08□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 TrhQ62361 256 aa9.08□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 N4bp3Q8C7U1 537 aa9.08□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 Vwc2Q8C8N3 324 aa9.08□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 Spata2Q8K004 515 aa9.08□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 Adi1Q99JT9 179 aa9.08□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 Olfr710Q9EP55 310 aa9.08□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 Dkk3Q9QUN9 349 aa9.08□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 Ehbp1l1Q99MS7 1716 aa9.08□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 Scaf11E9PZM7 1456 aaKnown RBP9.08□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 Tarbp1E9Q368 1579 aa9.07□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 Uggt1Q6P5E4 1551 aa9.07□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 Cd109Q8R422 1442 aa9.07□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 Zscan29E9Q5B4 869 aa9.07□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 Ulk1O70405 1051 aa9.07□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 Tyrp1P07147 537 aa9.07□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 Usp10P52479 792 aaKnown RBP9.07□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 Setd4P58467 439 aa9.07□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 Pde7aP70453 456 aa9.07□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 Hipk4Q3V016 616 aa9.07□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 Dtx1Q61010 627 aa9.07□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 Phc1Q64028 1012 aa9.07□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 Pnma1Q8C1C8 353 aa9.07□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 Rbm19Q8R3C6 952 aaKnown RBP9.07□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 Zc3h8Q9JJ48 305 aaKnown RBP9.07□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 Atp2b2Q9R0K7 1198 aa9.07□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 Skint5A7XUY5 1461 aa9.07□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 Iqgap1Q9JKF1 1657 aaKnown RBP9.07□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 PtprgQ05909 1442 aa9.06□□□□□ -0.96
Retrieved 100 of 22,080 RNA–protein pairs in 22.4 ms