RNA–Protein interactions for RNA: ENSMUST00000057438.6

Vcpip1-201, Transcript of Deubiquitinating protein VCIP135, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vcpip1, Length 9,749 nt, Biotype protein coding, Subcellular localisation Nucleus, Pseudopodium .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1-201ENSMUST00000057438 Vmn2r78K7N6U5 853 aa13.25□□□□□ -0.29
Vcpip1-201ENSMUST00000057438 SfnO70456 248 aaKnown RBP13.25□□□□□ -0.29
Vcpip1-201ENSMUST00000057438 Chl1P70232 1209 aa13.25□□□□□ -0.29
Vcpip1-201ENSMUST00000057438 Gm8922F6XVS9 199 aa13.24□□□□□ -0.29
Vcpip1-201ENSMUST00000057438 Fbxl5Q8C2S5 690 aa13.24□□□□□ -0.29
Vcpip1-201ENSMUST00000057438 Tbc1d23Q8K0F1 684 aa13.24□□□□□ -0.29
Vcpip1-201ENSMUST00000057438 Ndufa13Q9ERS2 144 aa13.24□□□□□ -0.29
Vcpip1-201ENSMUST00000057438 Ing2Q9ESK4 281 aa13.24□□□□□ -0.29
Vcpip1-201ENSMUST00000057438 Stk39Q9Z1W9 556 aa13.24□□□□□ -0.29
Vcpip1-201ENSMUST00000057438 Kat6aQ8BZ21 2003 aa13.24□□□□□ -0.29
Vcpip1-201ENSMUST00000057438 Ttc13A0A1L1SSC7 844 aa13.24□□□□□ -0.29
Vcpip1-201ENSMUST00000057438 Ccdc103Q9D9P2 237 aa13.24□□□□□ -0.29
Vcpip1-201ENSMUST00000057438 Usp14Q9JMA1 493 aaKnown RBP13.24□□□□□ -0.29
Vcpip1-201ENSMUST00000057438 Hspa2P17156 633 aa13.24□□□□□ -0.29
Vcpip1-201ENSMUST00000057438 Epas1P97481 874 aa13.24□□□□□ -0.29
Vcpip1-201ENSMUST00000057438 RnaselQ05921 735 aa13.24□□□□□ -0.29
Vcpip1-201ENSMUST00000057438 Pcgf5Q3UK78 256 aa13.24□□□□□ -0.29
Vcpip1-201ENSMUST00000057438 Alkbh8Q80Y20 664 aa13.24□□□□□ -0.29
Vcpip1-201ENSMUST00000057438 Vps39Q8R5L3 886 aa13.24□□□□□ -0.29
Vcpip1-201ENSMUST00000057438 Q9CR55 154 aa13.24□□□□□ -0.29
Vcpip1-201ENSMUST00000057438 Nccrp1G3X9C2 266 aa13.24□□□□□ -0.29
Vcpip1-201ENSMUST00000057438 Prpf3Q922U1 683 aaKnown RBP13.24□□□□□ -0.29
Vcpip1-201ENSMUST00000057438 Chmp2aQ9DB34 222 aa13.24□□□□□ -0.29
Vcpip1-201ENSMUST00000057438 Ttc17E9PVB5 1198 aa13.24□□□□□ -0.29
Vcpip1-201ENSMUST00000057438 Tp53bp2Q8CG79 1128 aa13.24□□□□□ -0.29
Vcpip1-201ENSMUST00000057438 Q922C1 641 aa13.24□□□□□ -0.29
Vcpip1-201ENSMUST00000057438 Usp54Q8BL06 1588 aaKnown RBP13.24□□□□□ -0.29
Vcpip1-201ENSMUST00000057438 Fdx1P46656 188 aa13.24□□□□□ -0.29
Vcpip1-201ENSMUST00000057438 WhammQ571B6 793 aa13.24□□□□□ -0.29
Vcpip1-201ENSMUST00000057438 Ccdc151Q8BSN3 593 aa13.24□□□□□ -0.29
Vcpip1-201ENSMUST00000057438 Bud13Q8R149 637 aa13.24□□□□□ -0.29
Vcpip1-201ENSMUST00000057438 Ncoa5Q91W39 579 aaKnown RBP13.24□□□□□ -0.29
Vcpip1-201ENSMUST00000057438 Adarb2Q9JI20 745 aa13.24□□□□□ -0.29
Vcpip1-201ENSMUST00000057438 Trpc1Q61056 793 aa13.24□□□□□ -0.29
Vcpip1-201ENSMUST00000057438 Zranb2Q9R020 330 aaKnown RBP13.24□□□□□ -0.29
Vcpip1-201ENSMUST00000057438 SufuQ9Z0P7 484 aa13.24□□□□□ -0.29
Vcpip1-201ENSMUST00000057438 Ccdc24E9PUW8 296 aa13.23□□□□□ -0.29
Vcpip1-201ENSMUST00000057438 Pcdhb9E9Q5G2 828 aa13.23□□□□□ -0.29
Vcpip1-201ENSMUST00000057438 Zfp846G3X996 541 aa13.23□□□□□ -0.29
Vcpip1-201ENSMUST00000057438 Kcnk9Q3LS21 402 aa13.23□□□□□ -0.29
Vcpip1-201ENSMUST00000057438 Cacna1dQ99246 2179 aa13.23□□□□□ -0.29
Vcpip1-201ENSMUST00000057438 Pla2r1Q62028 1487 aa13.23□□□□□ -0.29
Vcpip1-201ENSMUST00000057438 Dthd1E9PZX1 795 aa13.23□□□□□ -0.29
Vcpip1-201ENSMUST00000057438 Axdnd1Q3UZ57 424 aa13.23□□□□□ -0.29
Vcpip1-201ENSMUST00000057438 Dcaf15Q6PFH3 600 aa13.23□□□□□ -0.29
Vcpip1-201ENSMUST00000057438 Bbs7Q8K2G4 715 aa13.23□□□□□ -0.29
Vcpip1-201ENSMUST00000057438 Dbndd2Q9CRD4 158 aa13.23□□□□□ -0.29
Vcpip1-201ENSMUST00000057438 Tekt1Q9DAJ2 418 aa13.23□□□□□ -0.29
Vcpip1-201ENSMUST00000057438 Ddx25Q9QY15 484 aa13.23□□□□□ -0.29
Vcpip1-201ENSMUST00000057438 Tk2Q9R088 270 aa13.23□□□□□ -0.29
Vcpip1-201ENSMUST00000057438 Disp3A3KFU9 1347 aa13.23□□□□□ -0.29
Vcpip1-201ENSMUST00000057438 Tcof1O08784 1320 aaKnown RBP13.23□□□□□ -0.29
Vcpip1-201ENSMUST00000057438 Gsdmc4Q3TR54 480 aa13.23□□□□□ -0.29
Vcpip1-201ENSMUST00000057438 Asic4Q7TNS7 539 aa13.23□□□□□ -0.29
Vcpip1-201ENSMUST00000057438 Heatr3Q8BQM4 679 aa13.23□□□□□ -0.29
Vcpip1-201ENSMUST00000057438 Pfdn1Q9CWM4 122 aa13.23□□□□□ -0.29
Vcpip1-201ENSMUST00000057438 C1qtnf1Q9QXP7 281 aa13.23□□□□□ -0.29
Vcpip1-201ENSMUST00000057438 Tnni1Q9WUZ5 187 aa13.23□□□□□ -0.29
Vcpip1-201ENSMUST00000057438 DtnbO70585 659 aa13.23□□□□□ -0.29
Vcpip1-201ENSMUST00000057438 Yars2Q8BYL4 472 aaKnown RBP13.23□□□□□ -0.29
Vcpip1-201ENSMUST00000057438 Znf428Q8C1M2 176 aa13.23□□□□□ -0.29
Vcpip1-201ENSMUST00000057438 Tmem119Q8R138 280 aa13.23□□□□□ -0.29
Vcpip1-201ENSMUST00000057438 HmcesQ8R1M0 353 aaKnown RBP13.23□□□□□ -0.29
Vcpip1-201ENSMUST00000057438 Orc4O88708 433 aa13.23□□□□□ -0.29
Vcpip1-201ENSMUST00000057438 Cdh2P15116 906 aa13.23□□□□□ -0.29
Vcpip1-201ENSMUST00000057438 Adcy2Q80TL1 1090 aa13.23□□□□□ -0.29
Vcpip1-201ENSMUST00000057438 PtprcP06800 1291 aa13.23□□□□□ -0.29
Vcpip1-201ENSMUST00000057438 Adat2Q6P6J0 191 aa13.23□□□□□ -0.29
Vcpip1-201ENSMUST00000057438 Rpf1Q7TND5 349 aaKnown RBP13.23□□□□□ -0.29
Vcpip1-201ENSMUST00000057438 Vipas39Q8BGQ1 491 aa13.23□□□□□ -0.29
Vcpip1-201ENSMUST00000057438 Vps37aQ8CHS8 397 aa13.23□□□□□ -0.29
Vcpip1-201ENSMUST00000057438 Dis3l2Q8CI75 870 aaKnown RBP13.23□□□□□ -0.29
Vcpip1-201ENSMUST00000057438 Trmt44Q9D2Q2 713 aa13.23□□□□□ -0.29
Vcpip1-201ENSMUST00000057438 Tex21Q9R0U9 575 aa13.23□□□□□ -0.29
Vcpip1-201ENSMUST00000057438 Nos1Q9Z0J4 1429 aa13.23□□□□□ -0.29
Vcpip1-201ENSMUST00000057438 Pde8bE9Q4S1 865 aa13.23□□□□□ -0.29
Vcpip1-201ENSMUST00000057438 Eno1P17182 434 aaKnown RBP13.23□□□□□ -0.29
Vcpip1-201ENSMUST00000057438 Armc7Q3UJZ3 198 aa13.23□□□□□ -0.29
Vcpip1-201ENSMUST00000057438 AsnsQ61024 561 aa13.23□□□□□ -0.29
Vcpip1-201ENSMUST00000057438 Dclre1bQ8C7W7 541 aa13.23□□□□□ -0.29
Vcpip1-201ENSMUST00000057438 Gm10639E9Q6L7 222 aa13.22□□□□□ -0.29
Vcpip1-201ENSMUST00000057438 Gsta2P10648 222 aa13.22□□□□□ -0.29
Vcpip1-201ENSMUST00000057438 S100a9P31725 113 aa13.22□□□□□ -0.29
Vcpip1-201ENSMUST00000057438 Best2Q8BGM5 508 aa13.22□□□□□ -0.29
Vcpip1-201ENSMUST00000057438 Nlrp4aQ8BU40 982 aa13.22□□□□□ -0.29
Vcpip1-201ENSMUST00000057438 Ppm1kQ8BXN7 372 aa13.22□□□□□ -0.29
Vcpip1-201ENSMUST00000057438 Vps33aQ9D2N9 598 aa13.22□□□□□ -0.29
Vcpip1-201ENSMUST00000057438 Fip1l1Q9D824 581 aaKnown RBP13.22□□□□□ -0.29
Vcpip1-201ENSMUST00000057438 Abt1Q9QYL7 269 aaKnown RBP13.22□□□□□ -0.29
Vcpip1-201ENSMUST00000057438 Gimd1E9PW74 217 aa13.22□□□□□ -0.29
Vcpip1-201ENSMUST00000057438 Gm5861F6VCN9 180 aa13.22□□□□□ -0.29
Vcpip1-201ENSMUST00000057438 4933402N22RikF7D1B3 190 aa13.22□□□□□ -0.29
Vcpip1-201ENSMUST00000057438 Gm8897L7N294 181 aa13.22□□□□□ -0.29
Vcpip1-201ENSMUST00000057438 Cyp11b1Q3TG86 501 aa13.22□□□□□ -0.29
Vcpip1-201ENSMUST00000057438 Rasa3Q60790 834 aa13.22□□□□□ -0.29
Vcpip1-201ENSMUST00000057438 Mapk6Q61532 720 aa13.22□□□□□ -0.29
Vcpip1-201ENSMUST00000057438 Trim62Q80V85 475 aa13.22□□□□□ -0.29
Vcpip1-201ENSMUST00000057438 Usp28Q5I043 1051 aa13.22□□□□□ -0.29
Vcpip1-201ENSMUST00000057438 Fsd1lQ8BYN5 507 aa13.22□□□□□ -0.29
Vcpip1-201ENSMUST00000057438 Atp5c1Q91VR2 298 aaKnown RBP13.22□□□□□ -0.29
Retrieved 100 of 22,080 RNA–protein pairs in 19.9 ms