RNA–Protein interactions for RNA: ENSMUST00000044166.8

Cdc40-201, Transcript of Pre-mRNA-processing factor 17, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdc40, Length 3,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40-201ENSMUST00000044166 Asic2Q925H0 512 aa8.97□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Haus2Q9CQS9 234 aa8.97□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Eif3fQ9DCH4 361 aa8.97□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Scn11aQ9R053 1765 aa8.96□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Wdr72D3YYM4 1114 aa8.96□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Fgd3O88842 733 aa8.96□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Rpl13P47963 211 aaKnown RBP8.96□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Tcerg1lQ3B807 590 aa8.96□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Ccdc85aQ5SP85 500 aa8.96□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Krt9Q6RHW0 743 aa8.96□□□□□ -0.97
Cdc40-201ENSMUST00000044166 SugctQ7TNE1 436 aa8.96□□□□□ -0.97
Cdc40-201ENSMUST00000044166 R3hdm2Q80TM6 1044 aaKnown RBP8.96□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Bola2Q8BGS2 86 aa8.96□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Igdcc3Q8BQC3 813 aa8.96□□□□□ -0.97
Cdc40-201ENSMUST00000044166 AdpgkQ8VDL4 496 aa8.96□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Tekt2Q922G7 430 aa8.96□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Abcf2Q99LE6 628 aaKnown RBP8.96□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Slc24a3Q99PD7 645 aa8.96□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Q9CR55 154 aa8.96□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Erp44Q9D1Q6 406 aa8.96□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Trim10Q9WUH5 489 aa8.96□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Myh10Q61879 1976 aaKnown RBP8.96□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Dock5B2RY04 1868 aa8.96□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Gm36210A0A1B0GS00 229 aa8.96□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Casp8O89110 480 aa8.96□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Ap1m1P35585 423 aa8.96□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Ptpn12P35831 775 aa8.96□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Ephb4P54761 987 aa8.96□□□□□ -0.98
Cdc40-201ENSMUST00000044166 MagohP61327 146 aaKnown RBP8.96□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Tmed1Q3V009 227 aa8.96□□□□□ -0.98
Cdc40-201ENSMUST00000044166 E2f5Q61502 335 aa8.96□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Slain1Q68FF7 579 aa8.96□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Q6PD19 689 aa8.96□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Ahcyl1Q80SW1 530 aa8.96□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Tcp10aQ80W76 438 aa8.96□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Olfr805Q8VFI4 319 aa8.96□□□□□ -0.98
Cdc40-201ENSMUST00000044166 AslQ91YI0 464 aa8.96□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Tex13bQ99MW5 186 aa8.96□□□□□ -0.98
Cdc40-201ENSMUST00000044166 NsmfQ99NF2 532 aa8.96□□□□□ -0.98
Cdc40-201ENSMUST00000044166 MagohbQ9CQL1 146 aa8.96□□□□□ -0.98
Cdc40-201ENSMUST00000044166 ArpinQ9D0A3 226 aa8.96□□□□□ -0.98
Cdc40-201ENSMUST00000044166 NgdnQ9DB96 315 aaKnown RBP8.96□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Usp14Q9JMA1 493 aaKnown RBP8.96□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Net1Q9Z206 595 aa8.96□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Homer1Q9Z2Y3 366 aa8.96□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Ccdc88aQ5SNZ0 1873 aa8.96□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Ano3A2AHL1 981 aa8.96□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Gml2G5E8L7 176 aa8.96□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Gdap1O88741 358 aa8.96□□□□□ -0.98
Cdc40-201ENSMUST00000044166 FechP22315 420 aaKnown RBP8.96□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Gna15P30678 374 aa8.96□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Akr1b8P45377 316 aa8.96□□□□□ -0.98
Cdc40-201ENSMUST00000044166 PRAG1Q571I4 1179 aa8.96□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Pnma5Q5DTT8 618 aa8.96□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Ttf2Q5NC05 1138 aa8.96□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Lilrb4Q64281 335 aa8.96□□□□□ -0.98
Cdc40-201ENSMUST00000044166 TdrkhQ80VL1 560 aa8.96□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Gpcpd1Q8C0L9 675 aa8.96□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Usp20Q8C6M1 916 aa8.96□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Spire2Q8K1S6 718 aa8.96□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Champ1Q8K327 802 aaKnown RBP8.96□□□□□ -0.98
Cdc40-201ENSMUST00000044166 VillQ91YD6 859 aa8.96□□□□□ -0.98
Cdc40-201ENSMUST00000044166 PawrQ925B0 333 aa8.96□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Ankrd2Q9WV06 328 aa8.96□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Gm7356A0A087WSA6 508 aa8.95□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Tex35Q14BK3 207 aa8.95□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Gm4981Q3ULJ8 291 aa8.95□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Fhdc1Q3ULZ2 1149 aa8.95□□□□□ -0.98
Cdc40-201ENSMUST00000044166 FtoQ8BGW1 502 aa8.95□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Chmp2bQ8BJF9 213 aa8.95□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Rab11fip4Q8BQP8 635 aa8.95□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Bud13Q8R149 637 aa8.95□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Pcdhb3Q91XZ7 784 aa8.95□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Ndufv1Q91YT0 464 aa8.95□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Kif17Q99PW8 1038 aa8.95□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Gsdmdc1Q9D8T2 487 aa8.95□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Tjap1Q9DCD5 539 aa8.95□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Speer3W4VSP1 261 aa8.95□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Serpinb6cW4VSP4 379 aa8.95□□□□□ -0.98
Cdc40-201ENSMUST00000044166 NesQ6P5H2 1864 aaKnown RBP8.95□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Pabpc1lA2A5N3 607 aaKnown RBP8.95□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Armc3A2AU72 881 aa8.95□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Zfp788E9Q980 884 aa8.95□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Pja1O55176 578 aa8.95□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Gjc1P28229 396 aa8.95□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Pdha1P35486 390 aaKnown RBP8.95□□□□□ -0.98
Cdc40-201ENSMUST00000044166 AdkP55264 361 aa8.95□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Shox2P70390 331 aa8.95□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Mcl1P97287 331 aa8.95□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Lrfn1Q2WF71 766 aa8.95□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Aak1Q3UHJ0 959 aa8.95□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Lrig2Q52KR2 1054 aa8.95□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Zc3h12cQ5DTV4 884 aa8.95□□□□□ -0.98
Cdc40-201ENSMUST00000044166 HnrnpdQ60668 355 aaKnown RBP8.95□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Rnf220Q6PDX6 566 aa8.95□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Fgd5Q80UZ0 1219 aa8.95□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Zbed4Q80WQ9 1168 aa8.95□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Snx14Q8BHY8 964 aa8.95□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Gramd4Q8CB44 633 aa8.95□□□□□ -0.98
Cdc40-201ENSMUST00000044166 Tmed5Q9CXE7 229 aa8.95□□□□□ -0.98
Retrieved 100 of 22,080 RNA–protein pairs in 18.9 ms