RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 TwistnbQ78WZ7 330 aaKnown RBP14.61□□□□□ -0.07
Nup88-201ENSMUST00000035283 Pank4Q80YV4 820 aa14.61□□□□□ -0.07
Nup88-201ENSMUST00000035283 Gcfc2Q8BKT3 769 aa14.61□□□□□ -0.07
Nup88-201ENSMUST00000035283 Rbm41Q8JZV4 413 aa14.61□□□□□ -0.07
Nup88-201ENSMUST00000035283 Dennd1aQ8K382 1016 aa14.61□□□□□ -0.07
Nup88-201ENSMUST00000035283 Bzw2Q91VK1 419 aaKnown RBP14.61□□□□□ -0.07
Nup88-201ENSMUST00000035283 Q922C1 641 aa14.61□□□□□ -0.07
Nup88-201ENSMUST00000035283 Fam187aQ9D3R5 417 aa14.61□□□□□ -0.07
Nup88-201ENSMUST00000035283 Q9D5Q8 446 aa14.61□□□□□ -0.07
Nup88-201ENSMUST00000035283 Cacna1sQ02789 1880 aa14.61□□□□□ -0.07
Nup88-201ENSMUST00000035283 Gm5814J3QP80 125 aa14.61□□□□□ -0.07
Nup88-201ENSMUST00000035283 Epha3P29319 983 aa14.61□□□□□ -0.07
Nup88-201ENSMUST00000035283 Shox2P70390 331 aa14.61□□□□□ -0.07
Nup88-201ENSMUST00000035283 Mettl14Q3UIK4 456 aa14.61□□□□□ -0.07
Nup88-201ENSMUST00000035283 Eme2Q56A04 373 aa14.61□□□□□ -0.07
Nup88-201ENSMUST00000035283 Krt31Q61765 416 aa14.61□□□□□ -0.07
Nup88-201ENSMUST00000035283 Pick1Q62083 416 aa14.61□□□□□ -0.07
Nup88-201ENSMUST00000035283 PigsQ6PD26 555 aaKnown RBP14.61□□□□□ -0.07
Nup88-201ENSMUST00000035283 AdalQ80SY6 360 aa14.61□□□□□ -0.07
Nup88-201ENSMUST00000035283 BC048507Q80ZS7 89 aa14.61□□□□□ -0.07
Nup88-201ENSMUST00000035283 Ccdc28aQ8CEI3 192 aa14.61□□□□□ -0.07
Nup88-201ENSMUST00000035283 Epn2Q8CHU3 595 aa14.61□□□□□ -0.07
Nup88-201ENSMUST00000035283 Mrfap1Q9CQL7 125 aa14.61□□□□□ -0.07
Nup88-201ENSMUST00000035283 Dydc2Q9D3X8 139 aa14.61□□□□□ -0.07
Nup88-201ENSMUST00000035283 1700109H08RikQ9D9C0 210 aa14.61□□□□□ -0.07
Nup88-201ENSMUST00000035283 Pitpnm2Q6ZPQ6 1335 aa14.61□□□□□ -0.07
Nup88-201ENSMUST00000035283 1700003F12RikA2AKE5 210 aa14.6□□□□□ -0.07
Nup88-201ENSMUST00000035283 Ephb4P54761 987 aa14.6□□□□□ -0.07
Nup88-201ENSMUST00000035283 Adad1Q5SUE7 619 aa14.6□□□□□ -0.07
Nup88-201ENSMUST00000035283 Ttc16Q8C1F5 767 aa14.6□□□□□ -0.07
Nup88-201ENSMUST00000035283 Calml4Q91WQ9 153 aa14.6□□□□□ -0.07
Nup88-201ENSMUST00000035283 Txnrd3Q99MD6 652 aa14.6□□□□□ -0.07
Nup88-201ENSMUST00000035283 Fam111aQ9D2L9 613 aa14.6□□□□□ -0.07
Nup88-201ENSMUST00000035283 Myl7Q9QVP4 175 aa14.6□□□□□ -0.07
Nup88-201ENSMUST00000035283 Hsf3D0VYS2 492 aa14.6□□□□□ -0.07
Nup88-201ENSMUST00000035283 Ccdc78D3Z5T1 437 aa14.6□□□□□ -0.07
Nup88-201ENSMUST00000035283 Mmp15O54732 657 aa14.6□□□□□ -0.07
Nup88-201ENSMUST00000035283 PrphP15331 475 aa14.6□□□□□ -0.07
Nup88-201ENSMUST00000035283 Cep126Q0VBV7 1103 aa14.6□□□□□ -0.07
Nup88-201ENSMUST00000035283 Znf583Q3V080 568 aa14.6□□□□□ -0.07
Nup88-201ENSMUST00000035283 Ttf2Q5NC05 1138 aa14.6□□□□□ -0.07
Nup88-201ENSMUST00000035283 Fam196bQ6GQV1 535 aa14.6□□□□□ -0.07
Nup88-201ENSMUST00000035283 DcakdQ8BHC4 231 aaKnown RBP14.6□□□□□ -0.07
Nup88-201ENSMUST00000035283 OtoaQ8K561 1137 aa14.6□□□□□ -0.07
Nup88-201ENSMUST00000035283 SncbQ91ZZ3 133 aa14.6□□□□□ -0.07
Nup88-201ENSMUST00000035283 Xpo6Q924Z6 1125 aa14.6□□□□□ -0.07
Nup88-201ENSMUST00000035283 Ranbp17Q99NF8 1088 aa14.6□□□□□ -0.07
Nup88-201ENSMUST00000035283 Gpihbp1Q9D1N2 228 aa14.6□□□□□ -0.07
Nup88-201ENSMUST00000035283 Atp6v1e2Q9D593 226 aa14.6□□□□□ -0.07
Nup88-201ENSMUST00000035283 Gm8298J3QPI0 401 aa14.59□□□□□ -0.07
Nup88-201ENSMUST00000035283 Gm6121L7MUF1 212 aa14.59□□□□□ -0.07
Nup88-201ENSMUST00000035283 Tlr8P58682 1032 aa14.59□□□□□ -0.07
Nup88-201ENSMUST00000035283 Snap25P60879 206 aa14.59□□□□□ -0.07
Nup88-201ENSMUST00000035283 AcrbpQ3V140 540 aa14.59□□□□□ -0.07
Nup88-201ENSMUST00000035283 Kiaa1211Q5PR69 1207 aa14.59□□□□□ -0.07
Nup88-201ENSMUST00000035283 StilQ60988 1262 aa14.59□□□□□ -0.07
Nup88-201ENSMUST00000035283 Atxn2lQ7TQH0 1049 aaKnown RBP14.59□□□□□ -0.07
Nup88-201ENSMUST00000035283 PdxkQ8K183 312 aa14.59□□□□□ -0.07
Nup88-201ENSMUST00000035283 Ctage5Q8R311 779 aa14.59□□□□□ -0.07
Nup88-201ENSMUST00000035283 Snx24Q9CRB0 169 aa14.59□□□□□ -0.07
Nup88-201ENSMUST00000035283 IvdQ9JHI5 424 aa14.59□□□□□ -0.07
Nup88-201ENSMUST00000035283 Vav3Q9R0C8 847 aa14.59□□□□□ -0.07
Nup88-201ENSMUST00000035283 Tsc2Q61037 1814 aa14.59□□□□□ -0.07
Nup88-201ENSMUST00000035283 Chd5A2A8L1 1946 aa14.59□□□□□ -0.07
Nup88-201ENSMUST00000035283 Fbf1A2A870 1173 aa14.59□□□□□ -0.07
Nup88-201ENSMUST00000035283 Ttll10A4Q9F3 704 aa14.59□□□□□ -0.07
Nup88-201ENSMUST00000035283 Trmt1Q3TX08 663 aa14.59□□□□□ -0.07
Nup88-201ENSMUST00000035283 Drc1Q3USS3 753 aa14.59□□□□□ -0.07
Nup88-201ENSMUST00000035283 Zfp957Q3UT76 567 aa14.59□□□□□ -0.07
Nup88-201ENSMUST00000035283 Atp13a4Q5XF90 1193 aa14.59□□□□□ -0.07
Nup88-201ENSMUST00000035283 AsnsQ61024 561 aa14.59□□□□□ -0.07
Nup88-201ENSMUST00000035283 Pkn3Q8K045 878 aa14.59□□□□□ -0.07
Nup88-201ENSMUST00000035283 Pdxdc1Q99K01 787 aaKnown RBP14.59□□□□□ -0.07
Nup88-201ENSMUST00000035283 MlxiplQ99MZ3 864 aa14.59□□□□□ -0.07
Nup88-201ENSMUST00000035283 Ergic2Q9CR89 377 aa14.59□□□□□ -0.07
Nup88-201ENSMUST00000035283 Stk4Q9JI11 487 aa14.59□□□□□ -0.07
Nup88-201ENSMUST00000035283 Krt71Q9R0H5 524 aa14.59□□□□□ -0.07
Nup88-201ENSMUST00000035283 Gm5737A0A140LI11 423 aa14.58□□□□□ -0.07
Nup88-201ENSMUST00000035283 Apba1B2RUJ5 842 aa14.58□□□□□ -0.07
Nup88-201ENSMUST00000035283 DtnbO70585 659 aa14.58□□□□□ -0.07
Nup88-201ENSMUST00000035283 Eef2P58252 858 aaKnown RBP14.58□□□□□ -0.07
Nup88-201ENSMUST00000035283 Cyp2e1Q05421 493 aa14.58□□□□□ -0.07
Nup88-201ENSMUST00000035283 Tmc3Q7TQ69 1130 aa14.58□□□□□ -0.07
Nup88-201ENSMUST00000035283 ParnQ8VDG3 624 aa14.58□□□□□ -0.07
Nup88-201ENSMUST00000035283 Ccdc65Q8VHI7 493 aa14.58□□□□□ -0.07
Nup88-201ENSMUST00000035283 Pcdhb3Q91XZ7 784 aa14.58□□□□□ -0.07
Nup88-201ENSMUST00000035283 Trmt44Q9D2Q2 713 aa14.58□□□□□ -0.07
Nup88-201ENSMUST00000035283 PpihQ9D868 188 aa14.58□□□□□ -0.07
Nup88-201ENSMUST00000035283 Zfp831A2ADM8 1628 aa14.58□□□□□ -0.07
Nup88-201ENSMUST00000035283 Togaram1Q6A070 1776 aaKnown RBP14.58□□□□□ -0.08
Nup88-201ENSMUST00000035283 Art2aP17981 287 aa14.58□□□□□ -0.08
Nup88-201ENSMUST00000035283 Elf1Q60775 612 aa14.58□□□□□ -0.08
Nup88-201ENSMUST00000035283 Rnaseh2bQ80ZV0 308 aa14.58□□□□□ -0.08
Nup88-201ENSMUST00000035283 Cyp26b1Q811W2 512 aa14.58□□□□□ -0.08
Nup88-201ENSMUST00000035283 Psmd5Q8BJY1 504 aa14.58□□□□□ -0.08
Nup88-201ENSMUST00000035283 Ppfia2Q8BSS9 1257 aa14.58□□□□□ -0.08
Nup88-201ENSMUST00000035283 Pm20d1Q8C165 503 aa14.58□□□□□ -0.08
Nup88-201ENSMUST00000035283 Gramd4Q8CB44 633 aa14.58□□□□□ -0.08
Nup88-201ENSMUST00000035283 Champ1Q8K327 802 aaKnown RBP14.58□□□□□ -0.08
Nup88-201ENSMUST00000035283 Cbwd1Q8VEH6 393 aa14.58□□□□□ -0.08
Retrieved 100 of 22,080 RNA–protein pairs in 15.5 ms