RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 Cep126Q0VBV7 1103 aa10.69□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Micall2Q3TN34 1009 aa10.69□□□□□ -0.7
Ldlr-201ENSMUST00000034713 OtulinQ3UCV8 352 aa10.69□□□□□ -0.7
Ldlr-201ENSMUST00000034713 CgasQ8C6L5 507 aa10.69□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Dppa3Q8QZY3 150 aa10.69□□□□□ -0.7
Ldlr-201ENSMUST00000034713 PdhbQ9D051 359 aa10.69□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Slc8a3S4R2P9 928 aa10.69□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Gm28043E0CXC2 719 aa10.69□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Hoxc10P31257 342 aa10.69□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Trim80Q3V061 624 aa10.69□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Syne3Q4FZC9 975 aa10.69□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Srrm1Q52KI8 946 aaKnown RBP10.69□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Vmn1r209Q5NC97 312 aa10.69□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Usp50Q6P8X6 390 aa10.69□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Plekhg6Q8R0J1 787 aa10.69□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Bud13Q8R149 637 aa10.69□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Ndufv1Q91YT0 464 aa10.69□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Dync1i2O88487 612 aaKnown RBP10.69□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Gap43P06837 227 aa10.69□□□□□ -0.7
Ldlr-201ENSMUST00000034713 InhbaQ04998 424 aa10.69□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Myo6Q64331 1265 aa10.69□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Ddx19bQ8BZY3 494 aa10.69□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Abhd8Q8R0P8 439 aa10.69□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Trex1Q91XB0 314 aa10.69□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Mtmr4Q91XS1 1190 aa10.69□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Sdr42e1Q9D665 394 aa10.69□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Gfpt1P47856 697 aa10.68□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Foxp2P58463 714 aa10.68□□□□□ -0.7
Ldlr-201ENSMUST00000034713 MaeaQ4VC33 396 aa10.68□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Ptpn14Q62130 1189 aa10.68□□□□□ -0.7
Ldlr-201ENSMUST00000034713 6820408C15RikQ8BJX2 354 aa10.68□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Coro7Q9D2V7 922 aa10.68□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Slc40a1Q9JHI9 570 aa10.68□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Gfpt2Q9Z2Z9 682 aa10.68□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Cdc27A2A6Q5 825 aa10.68□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Kansl3A2RSY1 903 aaKnown RBP10.68□□□□□ -0.7
Ldlr-201ENSMUST00000034713 RpsaP14206 295 aaKnown RBP10.68□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Cyp11b2P15539 500 aa10.68□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Rasgrf1P27671 1262 aa10.68□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Tnni3P48787 211 aa10.68□□□□□ -0.7
Ldlr-201ENSMUST00000034713 PtgdrP70263 357 aa10.68□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Lrrn2Q6PHP6 730 aa10.68□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Pak4Q8BTW9 593 aa10.68□□□□□ -0.7
Ldlr-201ENSMUST00000034713 ErmapQ9JLN5 566 aa10.68□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Herc3A6H6S0 1050 aa10.68□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Tbc1d1Q60949 1255 aa10.68□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Supt20hQ7TT00 530 aaKnown RBP10.68□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Ssx2ipQ8VC66 615 aa10.68□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Nrbp2Q91V36 499 aa10.68□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Slc44a4Q91VA1 707 aa10.68□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Pla2g12bQ99P27 195 aa10.68□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Ddah1Q9CWS0 285 aa10.68□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Tube1Q9D6T1 475 aa10.68□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Adrm1Q9JKV1 407 aa10.68□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Kdm7aQ3UWM4 940 aa10.67□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Elf1Q60775 612 aa10.67□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Cyp4x1Q6A152 507 aa10.67□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Ptrh1Q8BW00 204 aa10.67□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Mmgt1Q8K273 131 aaKnown RBP10.67□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Zcchc18Q8VD24 393 aa10.67□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Utp11Q9CZJ1 253 aaKnown RBP10.67□□□□□ -0.7
Ldlr-201ENSMUST00000034713 IkbipQ9DBZ1 373 aa10.67□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Rgs22G3UYX5 1258 aa10.67□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Cd72P21855 354 aa10.67□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Ap1m1P35585 423 aa10.67□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Pla2g4aP47713 748 aa10.67□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Hcls1P49710 486 aaKnown RBP10.67□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Cav1P49817 178 aa10.67□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Rasa2P58069 847 aa10.67□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Ccdc33Q3ULW6 985 aa10.67□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Gm10392Q3V3I3 114 aa10.67□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Best3Q6H1V1 669 aa10.67□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Rabep2Q91WG2 554 aa10.67□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Gm28360A0A087WR25 190 aa10.67□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Arhgap42B2RQE8 841 aa10.67□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Kif5aP33175 1027 aa10.67□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Mmp20P57748 482 aa10.67□□□□□ -0.7
Ldlr-201ENSMUST00000034713 MagohP61327 146 aaKnown RBP10.67□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Lrch1P62046 709 aa10.67□□□□□ -0.7
Ldlr-201ENSMUST00000034713 GmpsQ3THK7 693 aa10.67□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Arhgef16Q3U5C8 713 aa10.67□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Gm14685Q52KH6 695 aa10.67□□□□□ -0.7
Ldlr-201ENSMUST00000034713 DeptorQ570Y9 409 aa10.67□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Lca5Q80ST9 704 aa10.67□□□□□ -0.7
Ldlr-201ENSMUST00000034713 CerkQ8K4Q7 531 aa10.67□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Pcdhgc5Q91XW9 944 aa10.67□□□□□ -0.7
Ldlr-201ENSMUST00000034713 MagohbQ9CQL1 146 aa10.67□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Serpina9Q9D7D2 418 aa10.67□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Rpf2Q9JJ80 306 aaKnown RBP10.67□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Rnf4Q9QZS2 194 aa10.67□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Stk11Q9WTK7 436 aa10.67□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Map2P20357 1828 aa10.67□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Ap1g2O88512 791 aa10.67□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Pik3r1P26450 724 aa10.67□□□□□ -0.7
Ldlr-201ENSMUST00000034713 OatP29758 439 aa10.67□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Kcnd1Q03719 651 aa10.67□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Map3k7Q62073 579 aa10.67□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Mxd3Q80US8 206 aa10.67□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Rapgef5Q8C0Q9 814 aa10.67□□□□□ -0.7
Ldlr-201ENSMUST00000034713 Rnf6Q9DBU5 667 aa10.67□□□□□ -0.7
Retrieved 100 of 22,080 RNA–protein pairs in 39.9 ms