RNA–Protein interactions for RNA: ENSMUST00000027127.13

Sf3b1-201, Transcript of Splicing factor 3B subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b1, Length 6,195 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1-201ENSMUST00000027127 Ppp1r13bQ62415 1087 aa9.19□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 TbckQ8BM85 762 aa9.19□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Spire2Q8K1S6 718 aa9.19□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 P3h4Q8K2B0 443 aa9.19□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Pcdhgc5Q91XW9 944 aa9.19□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Josd2Q9CR30 188 aa9.19□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Dph5Q9CWQ0 281 aa9.19□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Krt36B1AQ75 473 aa9.19□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Zfp42P22227 288 aa9.19□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 YwhaeP62259 255 aaKnown RBP9.19□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 MpndQ3TV65 487 aa9.19□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Kiaa1211Q5PR69 1207 aa9.19□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Slc10a5Q5PT54 434 aa9.19□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Mcf2lQ64096 1149 aa9.19□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 BcrQ6PAJ1 1270 aa9.19□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Tmc3Q7TQ69 1130 aa9.19□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Supt20hQ7TT00 530 aaKnown RBP9.19□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Zbed3Q9D0L1 228 aa9.19□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Ttll12Q3UDE2 639 aa9.19□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Hsf2bpQ9D4G2 338 aa9.19□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Vav3Q9R0C8 847 aa9.19□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Fam205a1D3YZF6 1314 aa9.19□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 AW822073A0A0N4SUK1 652 aa9.19□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Aoc3O70423 765 aa9.19□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Kif5cP28738 956 aaKnown RBP9.19□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Ighmbp2P40694 993 aa9.19□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Nkx2-5P42582 318 aa9.19□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Gja5Q01231 358 aa9.19□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 MyrflQ3UN70 904 aa9.19□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Lrig3Q6P1C6 1117 aa9.19□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Ccdc25Q78PG9 208 aa9.19□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Col23a1Q8K4G2 532 aa9.19□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Dcaf8Q8N7N5 591 aa9.19□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Txnrd3Q99MD6 652 aa9.19□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Kremen1Q99N43 473 aa9.19□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Tbx18Q9EPZ6 613 aa9.19□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 ChkbO55229 394 aa9.19□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 AurkbO70126 345 aa9.19□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Nmt1O70310 496 aaKnown RBP9.19□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Gfpt1P47856 697 aa9.19□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Gm3414Q3TNU4 584 aa9.19□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Brd9Q3UQU0 596 aaKnown RBP9.19□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Vav2Q60992 868 aa9.19□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Ppp2r5cQ60996 524 aa9.19□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Sin3bQ62141 1098 aa9.19□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Nipa1Q8BHK1 323 aa9.19□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Armc6Q8BNU0 468 aa9.19□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Als2cr12Q8BVM7 383 aa9.19□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Peg12Q9WVA7 283 aa9.19□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Slfn14V9GXG1 899 aa9.19□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Gm3095E9Q058 166 aa9.18□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Usp17ldG5E8G2 545 aa9.18□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Usp17lcG5E8I7 545 aa9.18□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Irf8P23611 424 aa9.18□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Hoxc10P31257 342 aa9.18□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Tnni3P48787 211 aa9.18□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Zhx1P70121 873 aa9.18□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Phf20Q8BLG0 1010 aaKnown RBP9.18□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Slc26a6Q8CIW6 758 aa9.18□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Meis2P97367 477 aa9.18□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Gngt1Q61012 74 aa9.18□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Cfap100Q80VN0 613 aa9.18□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Ago4Q8CJF8 861 aa9.18□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Pls3Q99K51 630 aa9.18□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Drap1Q9D6N5 205 aa9.18□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Prl2c5Q9JLV9 222 aa9.18□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Ercc4Q9QZD4 917 aa9.18□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Ttc13A0A1L1SSC7 844 aa9.18□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Stk10O55098 966 aa9.18□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Cct5P80316 541 aaKnown RBP9.18□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Fgfr4Q03142 799 aa9.18□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Eif3j1Q3UGC7 261 aaKnown RBP9.18□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Ctnna2Q61301 953 aa9.18□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Cnot10Q8BH15 744 aa9.18□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Rsad2Q8CBB9 362 aa9.18□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 LgsnQ8CIX8 563 aa9.18□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Myh2G3UW82 1942 aa9.18□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Men1O88559 611 aaKnown RBP9.18□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Ctnna1P26231 906 aaKnown RBP9.18□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Cap1P40124 474 aa9.18□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Trim72Q1XH17 477 aa9.18□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Map3k9Q3U1V8 1077 aa9.18□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Shc3Q61120 474 aa9.18□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 NfrkbQ6PIJ4 1296 aaKnown RBP9.18□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Zdhhc14Q8BQQ1 489 aa9.18□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Bud13Q8R149 637 aa9.18□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 BbxQ8VBW5 907 aa9.18□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Trp53inp1Q9QXE4 239 aa9.18□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 XdhQ00519 1335 aa9.18□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Myh3P13541 1940 aa9.18□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Plekha5E9Q6H8 1269 aa9.18□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Orc4O88708 433 aa9.18□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Map2k1P31938 393 aa9.18□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Map4k1P70218 827 aa9.18□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 F13a1Q8BH61 732 aa9.18□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Tor1aip2Q8BYU6 502 aa9.18□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Tsnaxip1Q99P25 704 aa9.18□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Trpc3Q9QZC1 836 aa9.18□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Sucla2Q9Z2I9 463 aa9.18□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 1700016G14RikA0A286YCZ6 238 aa9.17□□□□□ -0.94
Retrieved 100 of 22,080 RNA–protein pairs in 17.3 ms