RNA–Protein interactions for RNA: ENSMUST00000022646.8

Nkx3-1-201, Transcript of Homeobox protein Nkx-3.1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nkx3-1, Length 3,195 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1-201ENSMUST00000022646 Ccdc24E9PUW8 296 aa16.41■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 CnpP16330 420 aa16.41■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Atp13a3Q5XF89 1219 aa16.41■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Krt15Q61414 452 aa16.41■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Cd37Q61470 281 aa16.41■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Rnf187Q8BFX1 236 aa16.41■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Ccdc87Q8CDL9 855 aa16.41■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Appl2Q8K3G9 662 aa16.41■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Mageb16Q9CWV4 363 aa16.41■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Borcs6Q9D6W8 360 aa16.41■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Dydc1Q9D9T0 175 aa16.41■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 H2afzP0C0S6 128 aa16.4■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 H2afvQ3THW5 128 aa16.4■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Fam177a1Q8BR63 207 aa16.4■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Ttc22Q8C159 568 aa16.4■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Osbpl1aQ91XL9 950 aa16.4■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 1700017N19RikA0A087WPJ1 469 aa16.4■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 DgkiD3YWQ0 1071 aa16.4■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Idh1O88844 414 aaKnown RBP16.4■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Znf354cQ571J5 560 aa16.4■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 R3hdm2Q80TM6 1044 aaKnown RBP16.4■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Micall1Q8BGT6 870 aa16.4■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Chn1Q91V57 459 aa16.4■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Slc25a38Q91XD8 326 aa16.4■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Alg1Q921Q3 482 aa16.4■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Mrpl11Q9CQF0 192 aaKnown RBP16.4■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Ppp2r3dQ9Z176 491 aa16.4■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Btaf1E9QAE3 1848 aa16.4■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Dnajb6O54946 365 aa16.4■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Gas7Q60780 421 aa16.4■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 FdxrQ61578 494 aa16.4■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Insm1Q63ZV0 521 aa16.4■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Churc1Q6DG52 112 aa16.4■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Spata16Q8C636 571 aa16.4■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Nup58Q8R332 587 aa16.4■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Dph6Q9CQ28 267 aa16.4■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Capn9Q9D805 690 aa16.4■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Rexo2Q9D8S4 237 aa16.4■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Cdc42ep4Q9JM96 349 aaKnown RBP16.4■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Sept3Q9Z1S5 350 aa16.4■□□□□ 0.22
Nkx3-1-201ENSMUST00000022646 Ly75Q60767 1723 aa16.39■□□□□ 0.21
Nkx3-1-201ENSMUST00000022646 Cpsf2O35218 782 aaKnown RBP16.39■□□□□ 0.21
Nkx3-1-201ENSMUST00000022646 Eif3dO70194 548 aaKnown RBP16.39■□□□□ 0.21
Nkx3-1-201ENSMUST00000022646 Spout1Q3UHX9 385 aaKnown RBP16.39■□□□□ 0.21
Nkx3-1-201ENSMUST00000022646 Prr7Q3V0I2 269 aa16.39■□□□□ 0.21
Nkx3-1-201ENSMUST00000022646 Adcy2Q80TL1 1090 aa16.39■□□□□ 0.21
Nkx3-1-201ENSMUST00000022646 Lgi2Q8K4Z0 550 aa16.39■□□□□ 0.21
Nkx3-1-201ENSMUST00000022646 Smc6Q924W5 1097 aa16.39■□□□□ 0.21
Nkx3-1-201ENSMUST00000022646 Fthl17aQ9DAX0 182 aa16.39■□□□□ 0.21
Nkx3-1-201ENSMUST00000022646 Klf15Q9EPW2 415 aa16.39■□□□□ 0.21
Nkx3-1-201ENSMUST00000022646 Cabp5Q9JLK3 173 aa16.39■□□□□ 0.21
Nkx3-1-201ENSMUST00000022646 Zfp213E9QAW0 468 aa16.39■□□□□ 0.21
Nkx3-1-201ENSMUST00000022646 Ap1g2O88512 791 aa16.39■□□□□ 0.21
Nkx3-1-201ENSMUST00000022646 Parp2O88554 559 aa16.39■□□□□ 0.21
Nkx3-1-201ENSMUST00000022646 ProcP33587 460 aa16.39■□□□□ 0.21
Nkx3-1-201ENSMUST00000022646 Fgfr4Q03142 799 aa16.39■□□□□ 0.21
Nkx3-1-201ENSMUST00000022646 Cyp26b1Q811W2 512 aa16.39■□□□□ 0.21
Nkx3-1-201ENSMUST00000022646 AopepQ8BXQ6 817 aa16.39■□□□□ 0.21
Nkx3-1-201ENSMUST00000022646 Zhx2Q8C0C0 836 aaKnown RBP16.39■□□□□ 0.21
Nkx3-1-201ENSMUST00000022646 Ergic2Q9CR89 377 aa16.39■□□□□ 0.21
Nkx3-1-201ENSMUST00000022646 Cse1lQ9ERK4 971 aaKnown RBP16.39■□□□□ 0.21
Nkx3-1-201ENSMUST00000022646 Ankrd2Q9WV06 328 aa16.39■□□□□ 0.21
Nkx3-1-201ENSMUST00000022646 Becn2P0DM65 447 aa16.38■□□□□ 0.21
Nkx3-1-201ENSMUST00000022646 Npr3P70180 536 aa16.38■□□□□ 0.21
Nkx3-1-201ENSMUST00000022646 Znf367Q0VDT2 340 aa16.38■□□□□ 0.21
Nkx3-1-201ENSMUST00000022646 Ppp2r5cQ60996 524 aa16.38■□□□□ 0.21
Nkx3-1-201ENSMUST00000022646 Vps52Q8C754 723 aaKnown RBP16.38■□□□□ 0.21
Nkx3-1-201ENSMUST00000022646 Nemp2Q8CB65 421 aa16.38■□□□□ 0.21
Nkx3-1-201ENSMUST00000022646 Extl2Q9ES89 330 aa16.38■□□□□ 0.21
Nkx3-1-201ENSMUST00000022646 Tlr2Q9QUN7 784 aa16.38■□□□□ 0.21
Nkx3-1-201ENSMUST00000022646 CatspereP0DP43 985 aa16.38■□□□□ 0.21
Nkx3-1-201ENSMUST00000022646 ArP19091 899 aa16.38■□□□□ 0.21
Nkx3-1-201ENSMUST00000022646 Klra1P20937 262 aa16.38■□□□□ 0.21
Nkx3-1-201ENSMUST00000022646 Sfi1Q3UZY0 1216 aaKnown RBP16.38■□□□□ 0.21
Nkx3-1-201ENSMUST00000022646 Psmd5Q8BJY1 504 aa16.38■□□□□ 0.21
Nkx3-1-201ENSMUST00000022646 Gm45261A0A1B0GSP6 197 aa16.38■□□□□ 0.21
Nkx3-1-201ENSMUST00000022646 DtnbO70585 659 aa16.38■□□□□ 0.21
Nkx3-1-201ENSMUST00000022646 Cd68P31996 326 aa16.38■□□□□ 0.21
Nkx3-1-201ENSMUST00000022646 Gdpd4Q3TT99 632 aa16.38■□□□□ 0.21
Nkx3-1-201ENSMUST00000022646 Trip13Q3UA06 432 aa16.38■□□□□ 0.21
Nkx3-1-201ENSMUST00000022646 D630036H23RikQ3UQD6 204 aa16.38■□□□□ 0.21
Nkx3-1-201ENSMUST00000022646 Anks6Q6GQX6 883 aa16.38■□□□□ 0.21
Nkx3-1-201ENSMUST00000022646 Fnbp1Q80TY0 616 aa16.38■□□□□ 0.21
Nkx3-1-201ENSMUST00000022646 GopcQ8BH60 463 aa16.38■□□□□ 0.21
Nkx3-1-201ENSMUST00000022646 Slc14a1Q8VHL0 384 aa16.38■□□□□ 0.21
Nkx3-1-201ENSMUST00000022646 Pacsin2Q9WVE8 486 aaKnown RBP16.38■□□□□ 0.21
Nkx3-1-201ENSMUST00000022646 Gm4907B1AXB9 411 aa16.37■□□□□ 0.21
Nkx3-1-201ENSMUST00000022646 TyrobpO54885 114 aa16.37■□□□□ 0.21
Nkx3-1-201ENSMUST00000022646 Opa1P58281 960 aa16.37■□□□□ 0.21
Nkx3-1-201ENSMUST00000022646 PicalmQ7M6Y3 660 aaKnown RBP16.37■□□□□ 0.21
Nkx3-1-201ENSMUST00000022646 Fbxo10Q7TQF2 950 aa16.37■□□□□ 0.21
Nkx3-1-201ENSMUST00000022646 Tdrd3Q91W18 743 aaKnown RBP16.37■□□□□ 0.21
Nkx3-1-201ENSMUST00000022646 Fam173bQ9D1Z3 247 aa16.37■□□□□ 0.21
Nkx3-1-201ENSMUST00000022646 Drap1Q9D6N5 205 aa16.37■□□□□ 0.21
Nkx3-1-201ENSMUST00000022646 Sned1Q70E20 1403 aa16.37■□□□□ 0.21
Nkx3-1-201ENSMUST00000022646 C87977A2A958 498 aa16.37■□□□□ 0.21
Nkx3-1-201ENSMUST00000022646 Acot6Q32Q92 419 aa16.37■□□□□ 0.21
Nkx3-1-201ENSMUST00000022646 Tmprss11aQ3UQ41 389 aa16.37■□□□□ 0.21
Nkx3-1-201ENSMUST00000022646 BC051142Q3V0M8 400 aa16.37■□□□□ 0.21
Nkx3-1-201ENSMUST00000022646 MaeaQ4VC33 396 aa16.37■□□□□ 0.21
Retrieved 100 of 22,080 RNA–protein pairs in 36.3 ms